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Thiopurine methyltransferase

From Wikipedia, the free encyclopedia
Enzyme in humans

TPMT
Available structures
PDBOrtholog search:PDBeRCSB
List of PDB id codes

2BZG,2H11

Identifiers
AliasesTPMT, entrez:7172, TPMTD, thiopurine S-methyltransferase
External IDsOMIM:187680;MGI:98812;HomoloGene:313;GeneCards:TPMT;OMA:TPMT - orthologs
Gene location (Human)
Chromosome 6 (human)
Chr.Chromosome 6 (human)[1]
Chromosome 6 (human)
Genomic location for TPMT
Genomic location for TPMT
Band6p22.3Start18,128,311bp[1]
End18,155,077bp[1]
Gene location (Mouse)
Chromosome 13 (mouse)
Chr.Chromosome 13 (mouse)[2]
Chromosome 13 (mouse)
Genomic location for TPMT
Genomic location for TPMT
Band13 A5|13 24.5 cMStart47,175,958bp[2]
End47,198,213bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • buccal mucosa cell

  • tendon of biceps brachii

  • rectum

  • left lobe of thyroid gland

  • right lobe of thyroid gland

  • internal globus pallidus

  • mucosa of transverse colon

  • right lobe of liver

  • mucosa of ileum

  • human kidney
Top expressed in
  • right kidney

  • proximal tubule

  • human kidney

  • left lobe of liver

  • zygote

  • primary oocyte

  • secondary oocyte

  • transitional epithelium of urinary bladder

  • tail of embryo

  • otic vesicle
More reference expression data
BioGPS


More reference expression data
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo /QuickGO
Orthologs
SpeciesHumanMouse
Entrez

7172

22017

Ensembl

ENSG00000137364

ENSMUSG00000021376

UniProt

P51580

O55060

RefSeq (mRNA)

NM_000367
NM_001346817
NM_001346818

NM_016785

RefSeq (protein)

NP_000358
NP_001333746
NP_001333747

NP_058065

Location (UCSC)Chr 6: 18.13 – 18.16 MbChr 13: 47.18 – 47.2 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Thiopurine methyltransferase orthiopurine S-methyltransferase (TPMT) is anenzyme that in humans is encoded by theTPMTgene. A pseudogene for this locus is located on chromosome 18q.[5][6]

Thiopurine methyltransferase

Function

[edit]
thiopurine S-methyltransferase
Identifiers
EC no.2.1.1.67
CAS no.67339-09-7
Databases
IntEnzIntEnz view
BRENDABRENDA entry
ExPASyNiceZyme view
KEGGKEGG entry
MetaCycmetabolic pathway
PRIAMprofile
PDB structuresRCSB PDBPDBePDBsum
Gene OntologyAmiGO /QuickGO
Search
PMCarticles
PubMedarticles
NCBIproteins

Thiopurine methyltransferasemethylatesthiopurine compounds. The methyl donor isS-adenosyl-L-methionine (SAM), which is converted toS-adenosyl-L-homocysteine (SAH). This enzyme metabolizesthiopurine drugs viaS-adenosyl-L-methionine as the S-methyl donor andS-adenosyl-L-homocysteine as a byproduct.[5][7]

A typical reaction is the methylation of mercaptopurine to give 6-methylmercaptopurine.[7]: 652 

2D representation of the chemical structure of Mercaptopurine.
 
 
 
 
Rightward reaction arrow
 
 
 
6-Methylmercaptopurine
 

Clinical significance

[edit]

Thiopurine drugs such as6-mercaptopurine are used aschemotherapeutic agents andimmunosuppressive drugs. Genetic polymorphisms that affect this enzyme's activity are correlated with variations in sensitivity and toxicity to such drugs. About 1/300 individual is deficient for the enzyme.[5]

Pharmacology

[edit]

TPMT is best known for its role in the metabolism of thethiopurine drugs such asazathioprine,6-mercaptopurine and6-thioguanine. TPMT catalyzes the S-methylation of thiopurine drugs. Defects in the TPMT gene leads to decreased methylation and decreased inactivation of6MP leading to enhanced bone marrow toxicity which may causemyelosuppression, anemia, bleeding tendency,leukopenia & infection.[8][9][10] Allopurinol inhibits thiopurine S-methyltransferase, which can increase the utility of 6-MP.[11]

Diagnostic use

[edit]

Measurement of TPMT activity is encouraged prior to commencing the treatment of patients withthiopurine drugs such asazathioprine,6-mercaptopurine and6-thioguanine. Patients with low activity (10% prevalence) or especially absent activity (prevalence 0.3%) are at a heightened risk of drug-inducedbone marrow toxicity due to accumulation of the unmetabolised drug. Reutheret al. found that about 5% of all thiopurine therapies will fail due to toxicity. This intolerant group could be anticipated by routine measurement of TPMT activity. There appears to be a great deal of variation in TPMT mutation, with ethnic differences in mutation types accounting for variable responses to6MP.[9][12]

Genetic variants of TPMT have also been associated withcisplatin-inducedototoxicity in children.[13] TPMT is now listed as a pharmacogenomicbiomarker for adverse drug reactions to cisplatin by the FDA.[14]

See also

[edit]

References

[edit]
  1. ^abcGRCh38: Ensembl release 89: ENSG00000137364Ensembl, May 2017
  2. ^abcGRCm38: Ensembl release 89: ENSMUSG00000021376Ensembl, May 2017
  3. ^"Human PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^"Mouse PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^abc"Entrez Gene: TPMT thiopurine S-methyltransferase".National Center for Biotechnology Information. Retrieved2012-07-02.
  6. ^Lee D, Szumlanski C, Houtman J, Honchel R, Rojas K, Overhauser J, Wieben ED, Weinshilboum RM (March 1995). "Thiopurine methyltransferase pharmacogenetics. Cloning of human liver cDNA and a processed pseudogene on human chromosome 18q21.1".Drug Metab. Dispos.23 (3):398–405.PMID 7628307.
  7. ^abWeinshilboum RM, Sladek SL (1980)."Mercaptopurine pharmacogenetics: Monogenic inheritance of erythrocyte thiopurine methyltransferase activity".American Journal of Human Genetics.32 (5):651–662.PMC 1686086.PMID 7191632.
  8. ^Fujita K, Sasaki Y (August 2007)."Pharmacogenomics in drug-metabolizing enzymes catalyzing anticancer drugs for personalized cancer chemotherapy".Curr. Drug Metab.8 (6):554–62.doi:10.2174/138920007781368890.PMID 17691917. Archived from the original on 2013-01-12. Retrieved2008-07-25.
  9. ^abOncea I, Duley J (2008). "Chapter 38: Pharmacogenetics of Thiopurines".Goodman & Gilman's The Pharmacological Basis of Therapeutics (11th ed.). McGraw-Hill's Access Medicine.
  10. ^Evans WE. (2004). "Pharmacogenetics of thiopurine S-methyltransferase and thiopurine therapy".Ther Drug Monit.26 (2):186–91.doi:10.1097/00007691-200404000-00018.PMID 15228163.S2CID 34015182.
  11. ^"The Mechanism and Drug Interaction - Allopurinol and Azathioprine and Risk of Bone Marrow Suppression".www.ebmconsult.com. Retrieved2019-03-24.
  12. ^Genome Bioinformatics Group, Center for Biomolecular Science and Engineering."Human Gene TPMT (uc003ncm.1)".UCSC Genome Browser. University of California Santa Cruz. Retrieved2008-07-25.
  13. ^Ross CJ, Katzov-Eckert H, Dubé MP, Brooks B, Rassekh SR, Barhdadi A, Feroz-Zada Y, Visscher H, Brown AM, Rieder MJ, Rogers PC, Phillips MS, Carleton BC, Hayden MR (December 2009). "Genetic variants in TPMT and COMT are associated with hearing loss in children receiving cisplatin chemotherapy".Nat. Genet.41 (12):1345–9.doi:10.1038/ng.478.PMID 19898482.S2CID 21293339.
  14. ^"Cisplatin".Science & Research (Drugs). United States Food and Drug Administration. Archived fromthe original on January 21, 2012.

Further reading

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External links

[edit]
PDB gallery
  • 2bzg: CRYSTAL STRUCTURE OF THIOPURINE S-METHYLTRANSFERASE.
    2bzg: CRYSTAL STRUCTURE OF THIOPURINE S-METHYLTRANSFERASE.
  • 2h11: Amino-terminal Truncated Thiopurine S-Methyltransferase Complexed with S-Adenosyl-L-Homocysteine
    2h11: Amino-terminal Truncated Thiopurine S-Methyltransferase Complexed with S-Adenosyl-L-Homocysteine
Transferase: one carbon transferases (EC 2.1)
2.1.1:Methyl-
N-
O-
Homocysteine
Other
2.1.2:Hydroxymethyl-,
Formyl- and Related
Hydroxymethyltransferase
Formyltransferase
Other
2.1.3:Carboxy-
andCarbamoyl
Carboxy
Carbamoyl
2.1.4:Amidine
Activity
Regulation
Classification
Kinetics
Types
Portal:
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