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TPK1

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From Wikipedia, the free encyclopedia

Protein-coding gene in the species Homo sapiens

TPK1

Available structures

PDB

Ortholog search:PDBe RCSB

List of PDB id codes
3S4Y

Identifiers

Aliases

TPK1, HPP20, THMD5, thiamin pyrophosphokinase 1

External IDs

OMIM:606370;MGI:1352500;HomoloGene:6960;GeneCards:TPK1;OMA:TPK1 - orthologs

Gene location (Human)

Chr.	Chromosome 7 (human)^[1]

Band	7q35	Start	144,451,941bp^[1]
Band	7q35	End	144,836,395bp^[1]

Gene location (Mouse)

Chr.	Chromosome 6 (mouse)^[2]

Band	6\|6 B2.1	Start	43,321,935bp^[2]
Band	6\|6 B2.1	End	43,643,212bp^[2]

RNA expression pattern

Bgee

Human

Mouse (ortholog)

Top expressed in

secondary oocyte

jejunal mucosa

monocyte

duodenum

Achilles tendon

blood

gonad

endothelial cell

testicle

granulocyte

Top expressed in

right kidney

proximal tubule

epithelium of stomach

human kidney

pyloric antrum

ileum

duodenum

jejunum

mucous cell of stomach

genital tubercle

More reference expression data

BioGPS


More reference expression data

Gene ontology
Molecular function	thiamine diphosphokinase activity transferase activity thiamine binding nucleotide binding ATP binding kinase activity
Cellular component	cytosol
Biological process	thiamine metabolic process thiamine diphosphate biosynthetic process phosphorylation thiamine-containing compound metabolic process
Sources:Amigo /QuickGO

Orthologs

Species

Human

Mouse

Entrez


27010


29807

Ensembl


ENSG00000196511


ENSMUSG00000029735

UniProt


Q9H3S4


Q9R0M5

RefSeq (mRNA)

NM_001042482 NM_022445 NM_001350879 NM_001350880 NM_001350881
NM_001350882 NM_001350883 NM_001350884 NM_001350885 NM_001350886 NM_001350887 NM_001350889 NM_001350893 NM_001350894 NM_001350895


NM_013861 NM_001311111

RefSeq (protein)

NP_001035947 NP_071890 NP_001337808 NP_001337809 NP_001337810
NP_001337811 NP_001337812 NP_001337813 NP_001337814 NP_001337815 NP_001337816 NP_001337818 NP_001337822 NP_001337823 NP_001337824


NP_001298040 NP_038889

Location (UCSC)

Chr 7: 144.45 – 144.84 Mb

Chr 6: 43.32 – 43.64 Mb

PubMed search

^[3]

^[4]

Wikidata

View/Edit Human

View/Edit Mouse

Thiamin pyrophosphokinase 1 is anenzyme that in humans is encoded by theTPK1gene.^[5]^[6]

This gene encodes a protein, that exists as a homodimer, which catalyzes the conversion ofthiamine to thiamine pyrophosphate. Alternate transcriptionalsplice variants, encoding different isoforms, have been characterized.^[6]

References

[edit]

^^a ^b ^cGRCh38: Ensembl release 89: ENSG00000196511 –Ensembl, May 2017
^^a ^b ^cGRCm38: Ensembl release 89: ENSMUSG00000029735 –Ensembl, May 2017
^"Human PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
^"Mouse PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
^Nosaka K, Onozuka M, Kakazu N, Hibi S, Nishimura H, Nishino H, Abe T (May 2001). "Isolation and characterization of a human thiamine pyrophosphokinase cDNA".Biochim Biophys Acta.1517 (2):293–7.doi:10.1016/s0167-4781(00)00247-5.PMID 11342111.
^^a ^b"Entrez Gene: TPK1 thiamin pyrophosphokinase 1".

Egi Y, Koyama S, Shioda T, et al. (1992). "Identification, purification and reconstitution of thiamin metabolizing enzymes in human red blood cells".Biochim. Biophys. Acta.1160 (2):171–8.doi:10.1016/0167-4838(92)90004-W.PMID 1332781.
Bohn H, Winckler W (1985). "Isolation and characterization of four new placental tissue proteins (PP18, PP19, PP20, PP21)".Arch. Gynecol.236 (4):235–42.doi:10.1007/BF02133941.PMID 3896163.S2CID 6395375.
Iwashima A, Kinugasa A, Nose Y (1983). "Radiometric assay for thiamine pyrophosphokinase activity in human leukocytes".Acta Vitaminol. Enzymol.5 (1):41–5.PMID 6303095.
<Please add first missing authors to populate metadata.> (1999)."Toward a complete human genome sequence".Genome Res.8 (11):1097–108.doi:10.1101/gr.8.11.1097.PMID 9847074.
Nosaka K, Onozuka M, Nishino H, et al. (1999)."Molecular cloning and expression of a mouse thiamin pyrophosphokinase cDNA".J. Biol. Chem.274 (48):34129–33.doi:10.1074/jbc.274.48.34129.PMID 10567383.
Zhao R, Gao F, Goldman ID (2001). "Molecular cloning of human thiamin pyrophosphokinase".Biochim. Biophys. Acta.1517 (2):320–2.doi:10.1016/s0167-4781(00)00264-5.PMID 11342117.
Strausberg RL, Feingold EA, Grouse LH, et al. (2003)."Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences".Proc. Natl. Acad. Sci. U.S.A.99 (26):16899–903.Bibcode:2002PNAS...9916899M.doi:10.1073/pnas.242603899.PMC 139241.PMID 12477932.
Scherer SW, Cheung J, MacDonald JR, et al. (2003)."Human Chromosome 7: DNA Sequence and Biology".Science.300 (5620):767–72.Bibcode:2003Sci...300..767S.doi:10.1126/science.1083423.PMC 2882961.PMID 12690205.
Onozuka M, Nosaka K (2004)."Steady-state kinetics and mutational studies of recombinant human thiamin pyrophosphokinase".J. Nutr. Sci. Vitaminol.49 (3):156–62.doi:10.3177/jnsv.49.156.PMID 12953792.
Ota T, Suzuki Y, Nishikawa T, et al. (2004)."Complete sequencing and characterization of 21,243 full-length human cDNAs".Nat. Genet.36 (1):40–5.doi:10.1038/ng1285.PMID 14702039.
Gerhard DS, Wagner L, Feingold EA, et al. (2004)."The Status, Quality, and Expansion of the NIH Full-Length cDNA Project: The Mammalian Gene Collection (MGC)".Genome Res.14 (10B):2121–7.doi:10.1101/gr.2596504.PMC 528928.PMID 15489334.
Bellyei S, Szigeti A, Boronkai A, et al. (2005). "Cloning, sequencing, structural and molecular biological characterization of placental protein 20 (PP20)/human thiamin pyrophosphokinase (hTPK)".Placenta.26 (1):34–46.doi:10.1016/j.placenta.2004.03.008.PMID 15664409.
Toyoshima M, Oka A, Egi Y, et al. (2005)."Thiamine-responsive congenital lactic acidosis: clinical and biochemical studies"(PDF).Pediatr. Neurol.33 (2):98–104.doi:10.1016/j.pediatrneurol.2005.02.007.PMID 16087053.
Onozuka M, Konno H, Akaji K, et al. (2006)."Molecular cloning and analysis of the 5'-flanking region of the human thiamin pyrophosphokinase gene".J. Nutr. Sci. Vitaminol.51 (4):274–7.doi:10.3177/jnsv.51.274.PMID 16262001.
Kimura K, Wakamatsu A, Suzuki Y, et al. (2006)."Diversification of transcriptional modulation: Large-scale identification and characterization of putative alternative promoters of human genes".Genome Res.16 (1):55–65.doi:10.1101/gr.4039406.PMC 1356129.PMID 16344560.
Fradin D, Bougneres P (2007)."Three common intronic variants in the maternal and fetal thiamine pyrophosphokinase gene (TPK1) are associated with birth weight"(PDF).Ann. Hum. Genet.71 (Pt 5):578–85.doi:10.1111/j.1469-1809.2007.00348.x.PMID 17295612.S2CID 29631405.

Kinases:Serine/threonine-specific protein kinases (EC 2.7.11-12)

Serine/threonine-specific protein kinases (EC 2.7.11.1-EC 2.7.11.20)

Non-specific serine/threonine protein kinases (EC 2.7.11.1)	LATS1 LATS2 MAST1 MAST2 STK38 STK38L CIT ROCK1 SGK SGK2 SGK3 Protein kinase B AKT1 AKT2 AKT3 Ataxia telangiectasia mutated mTOR EIF-2 kinases PKR HRI EIF2AK3 EIF2AK4 Wee1 WEE1
Pyruvate dehydrogenase kinase (EC 2.7.11.2)	PDK1 PDK2 PDK3 PDK4
Dephospho-(reductase kinase) kinase (EC 2.7.11.3)	AMP-activated protein kinase α PRKAA1 PRKAA2 β PRKAB1 PRKAB2 γ PRKAG1 PRKAG2 PRKAG3
3-methyl-2-oxobutanoate dehydrogenase (acetyl-transferring) kinase (EC 2.7.11.4)	BCKDK BCKDHA BCKDHB
(isocitrate dehydrogenase (NADP+)) kinase (EC 2.7.11.5)	IDH2 IDH3A IDH3B IDH3G
(tyrosine 3-monooxygenase) kinase (EC 2.7.11.6)	STK4
Myosin-heavy-chain kinase (EC 2.7.11.7)	Aurora kinase Aurora A kinase Aurora B kinase Aurora C kinase
Fas-activated serine/threonine kinase (EC 2.7.11.8)	FASTK STK10
Goodpasture-antigen-binding protein kinase (EC 2.7.11.9)	-
IκB kinase (EC 2.7.11.10)	CHUK IKK2 TBK1 IKBKE IKBKG IKBKAP
cAMP-dependent protein kinase (EC 2.7.11.11)	Protein kinase A PRKACG PRKACB PRKACA PRKY
cGMP-dependent protein kinase (EC 2.7.11.12)	Protein kinase G PRKG1
Protein kinase C (EC 2.7.11.13)	Protein kinase C Protein kinase Cζ PKC alpha PRKCB1 PRKCD PRKCE PRKCH PRKCG PRKCI PRKCQ Protein kinase N1 PKN2 PKN3
Rhodopsin kinase (EC 2.7.11.14)	Rhodopsin kinase
Beta adrenergic receptor kinase (EC 2.7.11.15)	Beta adrenergic receptor kinase Beta adrenergic receptor kinase-2
G-protein coupled receptor kinases (EC 2.7.11.16)	GRK4 GRK5 GRK6
Ca2+/calmodulin-dependent (EC 2.7.11.17)	BRSK2 CAMK1 CAMK1A CAMK1B CAMK1D CAMK1G CAMK2 CAMK2A CAMK2B CAMK2D CAMK2G CAMK4 MLCK CASK CHEK1 CHEK2 DAPK1 DAPK2 DAPK3 STK11 MAPKAPK2 MAPKAPK3 MAPKAPK5 MARK1 MARK2 MARK3 MARK4 MELK MKNK1 MKNK2 NUAK1 NUAK2 OBSCN PASK PHKG1 PHKG2 PIM1 PIM2 PKD1 PRKD2 PRKD3 PSKH1 SNF1LK2 KIAA0999 STK40 SNF1LK SNRK SPEG TSSK2 Kalirin TRIB1 TRIB2 TRIB3 TRIO Titin DCLK1
Myosin light-chain kinase (EC 2.7.11.18)	MYLK MYLK2 MYLK3 MYLK4
Phosphorylase kinase (EC 2.7.11.19)	PHKA1 PHKA2 PHKB PHKG1 PHKG2
Elongation factor 2 kinase (EC 2.7.11.20)	EEF2K STK19
Polo kinase (EC 2.7.11.21)	PLK1 PLK2 PLK3 PLK4

Serine/threonine-specific protein kinases (EC 2.7.11.21-EC 2.7.11.30)

Polo kinase (EC 2.7.11.21)	PLK1 PLK2 PLK3 PLK4
Cyclin-dependent kinase (EC 2.7.11.22)	CDK1 CDK2 CDKL2 CDK3 CDK4 CDK5 CDKL5 CDK6 CDK7 CDK8 CDK9 CDK10 CDK12 CDC2L5 PCTK1 PCTK2 PCTK3 PFTK1 CDC2L1
(RNA-polymerase)-subunit kinase (EC 2.7.11.23)	RPS6KA5 RPS6KA4 P70S6 kinase P70-S6 Kinase 1 RPS6KB2 RPS6KA2 RPS6KA3 RPS6KA1 RPS6KC1
Mitogen-activated protein kinase (EC 2.7.11.24)	Extracellular signal-regulated MAPK1 MAPK3 MAPK4 MAPK6 MAPK7 MAPK12 MAPK15 C-Jun N-terminal MAPK8 MAPK9 MAPK10 P38 mitogen-activated protein MAPK11 MAPK13 MAPK14
MAP3K (EC 2.7.11.25)	MAP kinase kinase kinases MAP3K1 MAP3K2 MAP3K3 MAP3K4 MAP3K5 MAP3K6 MAP3K7 MAP3K8 RAFs ARAF BRAF KSR1 KSR2 MLKs MAP3K12 MAP3K13 MAP3K9 MAP3K10 MAP3K11 MAP3K7 ZAK CDC7 MAP3K14
Tau-protein kinase (EC 2.7.11.26)	TPK1 TTK GSK-3
(acetyl-CoA carboxylase) kinase (EC 2.7.11.27)	-
Tropomyosin kinase (EC 2.7.11.28)	-
Low-density-lipoprotein receptor kinase (EC 2.7.11.29)	-
Receptor protein serine/threonine kinase (EC 2.7.11.30)	Bone morphogenetic protein receptors BMPR1 BMPR1A BMPR1B BMPR2 ACVR1 ACVR1B ACVR1C ACVR2A ACVR2B ACVRL1 Anti-Müllerian hormone receptor

Dual-specificity kinases (EC 2.7.12)

MAP2K	MAP2K1 MAP2K2 MAP2K3 MAP2K4 MAP2K5 MAP2K6 MAP2K7

v t e Enzymes
Activity	Active site Binding site Catalytic triad Oxyanion hole Enzyme promiscuity Diffusion-limited enzyme Cofactor Enzyme catalysis
Regulation	Allosteric regulation Cooperativity Enzyme inhibitor Enzyme activator
Classification	EC number Enzyme superfamily Enzyme family List of enzymes
Kinetics	Enzyme kinetics Eadie–Hofstee diagram Hanes–Woolf plot Lineweaver–Burk plot Michaelis–Menten kinetics
Types	EC1Oxidoreductases (list) EC2Transferases (list) EC3Hydrolases (list) EC4Lyases (list) EC5Isomerases (list) EC6Ligases (list) EC7Translocases (list)

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