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TFAP2D

From Wikipedia, the free encyclopedia
Mammalian protein found in Homo sapiens
TFAP2D
Identifiers
AliasesTFAP2D, TFAP2BL1, transcription factor AP-2 delta, AP-2delta
External IDsOMIM:610161;MGI:2153466;HomoloGene:17700;GeneCards:TFAP2D;OMA:TFAP2D - orthologs
Gene location (Human)
Chromosome 6 (human)
Chr.Chromosome 6 (human)[1]
Chromosome 6 (human)
Genomic location for TFAP2D
Genomic location for TFAP2D
Band6p12.3Start50,713,526bp[1]
End50,773,033bp[1]
Gene location (Mouse)
Chromosome 1 (mouse)
Chr.Chromosome 1 (mouse)[2]
Chromosome 1 (mouse)
Genomic location for TFAP2D
Genomic location for TFAP2D
Band1|1 A3Start19,173,246bp[2]
End19,236,570bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • oocyte

  • buccal mucosa cell

  • secondary oocyte

  • testicle

  • ganglionic eminence

  • ventral tegmental area

  • amygdala

  • superior frontal gyrus

  • prefrontal cortex

  • dorsolateral prefrontal cortex
Top expressed in
  • urethra

  • female urethra

  • male urethra

  • inferior colliculi

  • myocardium of atrium

  • embryo

  • ganglionic eminence

  • neural layer of retina

  • primordial ventricle

  • lumbar spinal ganglion
More reference expression data
BioGPS
n/a
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo /QuickGO
Orthologs
SpeciesHumanMouse
Entrez

83741

226896

Ensembl

ENSG00000008197

ENSMUSG00000042596

UniProt

Q7Z6R9

Q91ZK0

RefSeq (mRNA)

NM_172238

NM_153154
NM_001379073
NM_001379074

RefSeq (protein)

NP_758438

NP_694794
NP_001366002
NP_001366003

Location (UCSC)Chr 6: 50.71 – 50.77 MbChr 1: 19.17 – 19.24 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Transcription factor AP-2 delta (activating enhancer binding protein 2 delta), also known asTFAP2D, is a humangene. Theprotein encoded by this gene is atranscription factor.[5]

See also

[edit]

References

[edit]
  1. ^abcGRCh38: Ensembl release 89: ENSG00000008197Ensembl, May 2017
  2. ^abcGRCm38: Ensembl release 89: ENSMUSG00000042596Ensembl, May 2017
  3. ^"Human PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^"Mouse PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^Cheng C, Ying K, Xu M, Zhao W, Zhou Z, Huang Y, Wang W, Xu J, Zeng L, Xie Y, Mao Y (January 2002). "Cloning and characterization of a novel human transcription factor AP-2 beta like gene (TFAP2BL1)".Int. J. Biochem. Cell Biol.34 (1):78–86.doi:10.1016/S1357-2725(01)00098-X.PMID 11733187.

External links

[edit]
(1) Basic domains
(1.1) Basicleucine zipper (bZIP)
(1.2) Basic helix-loop-helix (bHLH)
Group A
Group B
Group C
bHLH-PAS
Group D
Group E
Group F
bHLH-COE
(1.3)bHLH-ZIP
(1.4) NF-1
(1.5) RF-X
(1.6) Basic helix-span-helix (bHSH)
(2)Zinc finger DNA-binding domains
(2.1)Nuclear receptor(Cys4)
subfamily 1
subfamily 2
subfamily 3
subfamily 4
subfamily 5
subfamily 6
subfamily 0
(2.2) Other Cys4
(2.3) Cys2His2
(2.4) Cys6
(2.5) Alternating composition
(2.6) WRKY
(3.1)Homeodomain
Antennapedia
ANTP class
protoHOX
Hox-like
metaHOX
NK-like
other
(3.2) Paired box
(3.3)Fork head /winged helix
(3.4)Heat shock factors
(3.5) Tryptophan clusters
(3.6) TEA domain
  • transcriptional enhancer factor
(4)β-Scaffold factors with minor groove contacts
(4.1)Rel homology region
(4.2)STAT
(4.3) p53-like
(4.4)MADS box
(4.6)TATA-binding proteins
(4.7)High-mobility group
(4.9) Grainyhead
(4.10) Cold-shock domain
(4.11) Runt
(0) Other transcription factors
(0.2) HMGI(Y)
(0.3)Pocket domain
(0.5)AP-2/EREBP-related factors
(0.6) Miscellaneous


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