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Succinyl-CoA

From Wikipedia, the free encyclopedia
Succinyl-CoA
Names
IUPAC name
4-[(2-{3-[(2R)-4-{[1,3-Dihydroxy-1,3-dioxo-3-(3′-O-phosphonoadenosin-5′-O-yl)-1λ5,3λ5-diphosphoxan-1-yl]oxy}-3,3-dimethylbutanamido]propanamido}ethyl)sulfanyl]-4-oxobutanoic acid
Systematic IUPAC name
(9R)-1-[(2R,3S,4R,5R)-5-(6-Amino-9H-purin-9-yl)-4-hydroxy-3-(phosphonooxy)oxolan-2-yl]-3,5,9-trihydroxy-8,8-dimethyl-3,5,10,14,19-pentaoxo-2,4,6-trioxa-18-thia-11,15-diaza-3λ5,5λ5-diphosphadocosan-22-oic acid
Identifiers
3D model (JSmol)
ChEBI
ChemSpider
ECHA InfoCard100.009.163Edit this at Wikidata
MeSHsuccinyl-coenzyme+A
UNII
  • InChI=1S/C25H40N7O19P3S/c1-25(2,20(38)23(39)28-6-5-14(33)27-7-8-55-16(36)4-3-15(34)35)10-48-54(45,46)51-53(43,44)47-9-13-19(50-52(40,41)42)18(37)24(49-13)32-12-31-17-21(26)29-11-30-22(17)32/h11-13,18-20,24,37-38H,3-10H2,1-2H3,(H,27,33)(H,28,39)(H,34,35)(H,43,44)(H,45,46)(H2,26,29,30)(H2,40,41,42)/t13-,18-,19-,20+,24-/m1/s1 checkY
    Key: VNOYUJKHFWYWIR-ITIYDSSPSA-N checkY
  • InChI=1/C25H40N7O19P3S/c1-25(2,20(38)23(39)28-6-5-14(33)27-7-8-55-16(36)4-3-15(34)35)10-48-54(45,46)51-53(43,44)47-9-13-19(50-52(40,41)42)18(37)24(49-13)32-12-31-17-21(26)29-11-30-22(17)32/h11-13,18-20,24,37-38H,3-10H2,1-2H3,(H,27,33)(H,28,39)(H,34,35)(H,43,44)(H,45,46)(H2,26,29,30)(H2,40,41,42)/t13-,18-,19-,20+,24-/m1/s1
    Key: VNOYUJKHFWYWIR-ITIYDSSPBJ
  • O=C(O)CCC(=O)SCCNC(=O)CCNC(=O)[C@H](O)C(C)(C)COP(=O)(O)OP(=O)(O)OC[C@H]3O[C@@H](n2cnc1c(ncnc12)N)[C@H](O)[C@@H]3OP(=O)(O)O
Properties
C25H40N7O19P3S
Molar mass867.608
Except where otherwise noted, data are given for materials in theirstandard state (at 25 °C [77 °F], 100 kPa).
☒N verify (what is checkY☒N ?)
Chemical compound

Succinyl-coenzyme A, abbreviated assuccinyl-CoA (/ˌsʌksɪnəlˌkˈ/) orSucCoA, is athioester ofsuccinic acid andcoenzyme A.

Sources

[edit]

It is an important intermediate in thecitric acid cycle, where it is synthesized fromα-ketoglutarate byα-ketoglutarate dehydrogenase throughdecarboxylation. During the process,coenzyme A is added.

With B12 as an enzymatic cofactor, it is also synthesized frompropionyl CoA, the odd-numbered fatty acid, which cannot undergo beta-oxidation.[1] Propionyl-CoA is carboxylated to D-methylmalonyl-CoA, isomerized to L-methylmalonyl-CoA, and rearranged to yield succinyl-CoA via avitamin B12-dependent enzyme. While succinyl-CoA is an intermediate of thecitric acid cycle, it cannot be readily incorporated there because there is no net consumption of succinyl-CoA. Succinyl-CoA is first converted to malate, and then to pyruvate where it is then transported to the matrix to enter the citric acid cycle.

Fate

[edit]

It is converted intosuccinate through thehydrolytic release of coenzyme A bysuccinyl-CoA synthetase (succinate thiokinase).

Another fate of succinyl-CoA isporphyrin synthesis, where succinyl-CoA andglycine are combined byALA synthase to formδ-aminolevulinic acid (dALA). This process is the committed step in the biosynthesis ofporphobilinogen and thus hemoglobin.

Formation

[edit]

Succinyl CoA can be formed frommethylmalonyl CoA through the utilization of deoxyadenosyl-B12 (deoxyadenosylcobalamin) by the enzymemethylmalonyl-CoA mutase. This reaction, which requiresvitamin B12 as a cofactor, is important in the catabolism of some branched-chain amino acids as well as odd-chain fatty acids.

Interactive pathway map

[edit]

Click on genes, proteins and metabolites below to link to respective articles.[§ 1]

  1. ^The interactive pathway map can be edited at WikiPathways:"TCACycle_WP78".

References

[edit]
  1. ^Halarnkar PP, Blomquist GJ (1989). "Comparative aspects of propionate metabolism".Comp. Biochem. Physiol. B.92 (2):227–31.doi:10.1016/0305-0491(89)90270-8.PMID 2647392.
+H2O
Leftward reaction arrow with minor product(s) to bottom left and minor substrate(s) from bottom right
NADH +H+
NAD+
Leftward reaction arrow with minor substrate(s) from bottom right
 
H2O
Leftward reaction arrow with minor product(s) to bottom left and minor substrate(s) from bottom right
FADH2
FAD
Leftward reaction arrow with minor product(s) to bottom left and minor substrate(s) from bottom right
CoA + ATP (GTP)
Pi + ADP (GDP)
NADH + H+ + CO2
CoANAD+
 
H2O
Rightward reaction arrow with minor product(s) to top right
H2O
 
Rightward reaction arrow with minor substrate(s) from top left
NAD(P)+
NAD(P)H +H+
Rightward reaction arrow with minor substrate(s) from top left and minor product(s) to top right
 
CO2
Rightward reaction arrow with minor product(s) to top right
Kacetyl-CoA
lysine
leucine
tryptophanalanine
G
G→pyruvate
citrate
glycine
serine
G→glutamate
α-ketoglutarate
histidine
proline
arginine
other
G→propionyl-CoA
succinyl-CoA
valine
isoleucine
methionine
threonine
propionyl-CoA
G→fumarate
phenylalaninetyrosine
G→oxaloacetate
Other
Cysteine metabolism
Retrieved from "https://en.wikipedia.org/w/index.php?title=Succinyl-CoA&oldid=1335027903"
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