Movatterモバイル変換


[0]ホーム

URL:


Jump to content
WikipediaThe Free Encyclopedia
Search

Simple Modular Architecture Research Tool

From Wikipedia, the free encyclopedia
Biological database
icon
This articlerelies excessively onreferences toprimary sources. Please improve this article by addingsecondary or tertiary sources.
Find sources: "Simple Modular Architecture Research Tool" – news ·newspapers ·books ·scholar ·JSTOR
(September 2015) (Learn how and when to remove this message)
SMART
Content
DescriptionIdentification scheme forprotein domains.
Data types
captured
Protein domains
Organismsall
Contact
Research centerEuropean Molecular Biology Laboratory
Primary citationPMID 18978020
Access
Websitehttp://smart.embl-heidelberg.de
Miscellaneous
LicenseFree to academics, but not commercial users
Version7
Curation policyYes

Simple Modular Architecture Research Tool (SMART) is abiological database that is used in the identification and analysis ofprotein domains within protein sequences.[1][2] SMART usesprofile-hidden Markov models built frommultiple sequence alignments to detect protein domains in protein sequences. The most recent release of SMART contains 1,204 domain models.[3] Data from SMART was used in creating theConserved Domain Database collection and is also distributed as part of theInterPro database.[4] The database is hosted by theEuropean Molecular Biology Laboratory in Heidelberg.

References

[edit]
  1. ^Schultz J, Milpetz F, Bork P, Ponting CP (May 1998)."SMART, a simple modular architecture research tool: identification of signaling domains"(PDF).Proc. Natl. Acad. Sci. U.S.A.95 (11):5857–64.Bibcode:1998PNAS...95.5857S.doi:10.1073/pnas.95.11.5857.PMC 34487.PMID 9600884.
  2. ^Letunic I, Doerks T, Bork P (January 2009)."SMART 6: recent updates and new developments".Nucleic Acids Res.37 (Database issue): D229–32.doi:10.1093/nar/gkn808.PMC 2686533.PMID 18978020.
  3. ^Letunic, Ivica; Doerks, Tobias; Bork, Peer (January 2015)."SMART: recent updates, new developments and status in 2015".Nucleic Acids Research.43 (Database issue): D257–260.doi:10.1093/nar/gku949.ISSN 1362-4962.PMC 4384020.PMID 25300481.
  4. ^Mulder NJ, Apweiler R, Attwood TK, et al. (September 2002)."InterPro: an integrated documentation resource for protein families, domains and functional sites".Brief. Bioinformatics.3 (3):225–35.doi:10.1093/bib/3.3.225.PMID 12230031.

External links

[edit]


Stub icon

Thisdatabase-related article is astub. You can help Wikipedia byexpanding it.

Stub icon 1Stub icon 2

Thisbioinformatics-related article is astub. You can help Wikipedia byexpanding it.

Retrieved from "https://en.wikipedia.org/w/index.php?title=Simple_Modular_Architecture_Research_Tool&oldid=1240728686"
Categories:
Hidden categories:

[8]ページ先頭

©2009-2025 Movatter.jp