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SUFU

From Wikipedia, the free encyclopedia
Protein-coding gene in the species Homo sapiens
SUFU
Available structures
PDBOrtholog search:PDBeRCSB
List of PDB id codes

1M1L,4BL8,4BL9,4BLA,4BLB,4BLD,4KM8,4KM9,4KMD,4KMH

Identifiers
AliasesSUFU, PRO1280, SUFUH, SUFUXL, SUFU negative regulator of hedgehog signaling, JBTS32
External IDsOMIM:607035;MGI:1345643;HomoloGene:9262;GeneCards:SUFU;OMA:SUFU - orthologs
Gene location (Human)
Chromosome 10 (human)
Chr.Chromosome 10 (human)[1]
Chromosome 10 (human)
Genomic location for SUFU
Genomic location for SUFU
Band10q24.32Start102,503,972bp[1]
End102,633,535bp[1]
Gene location (Mouse)
Chromosome 19 (mouse)
Chr.Chromosome 19 (mouse)[2]
Chromosome 19 (mouse)
Genomic location for SUFU
Genomic location for SUFU
Band19 C3|19 38.85 cMStart46,385,335bp[2]
End46,477,243bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • skin of arm

  • nipple

  • body of tongue

  • vein

  • stromal cell of endometrium

  • synovial membrane

  • mucosa of pharynx

  • saphenous vein

  • trigeminal ganglion

  • internal globus pallidus
Top expressed in
  • otic vesicle

  • seminiferous tubule

  • saccule

  • otic placode

  • secondary oocyte

  • zygote

  • primary oocyte

  • spermatogonium

  • epiblast

  • yolk sac
More reference expression data
BioGPS
More reference expression data
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo /QuickGO
Orthologs
SpeciesHumanMouse
Entrez

51684

24069

Ensembl

ENSG00000107882

ENSMUSG00000025231

UniProt

Q9UMX1

Q9Z0P7

RefSeq (mRNA)

NM_001178133
NM_016169

NM_001025391
NM_015752

RefSeq (protein)

NP_001171604
NP_057253

NP_001020562
NP_056567

Location (UCSC)Chr 10: 102.5 – 102.63 MbChr 19: 46.39 – 46.48 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Suppressor of fused homolog is aprotein that in humans is encoded by theSUFUgene.[5][6]Inmolecular biology, theprotein domain suppressor of fusedprotein (Sufu) has an important role in thecell. The Sufu is important in negativelyregulating an importantsignalling pathway in the cell, theHedgehog signalling pathway (HH). This particular pathway is crucial inembryonic development. There are severalhomologues of Sufu, found in a wide variety oforganisms.

Function

[edit]

SUFU encodes a component of the sonic hedgehog (SHH) / patched (PTCH) signalingpathway. Mutations in genes encoding components of this pathway are deleterious for normal development and are associated with cancer-predisposing syndromes (e.g., holoprosencephaly,HPE3, basal cell nevus syndrome,BCNS, and Greig cephalopolysyndactyly syndrome,GCPS).[6]Sufu has also been found to have a crucial role in tumour suppression. To be more specific, it has a tumour-suppressorgene that predisposes, or in other words makes individuals more susceptible tomedulloblastoma, because it modulates the SHHsignalling pathway.[7] The N-terminal domain, which this entry refers to contains Glitranscription factors.[8]

Interactions

[edit]

SUFU has been shown tointeract withGLI1,[9][10][11]GLI3[12] andPEX26.[13]

Conservation

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Thehumanortholog ofDrosophila suppressor of fused, has aconserved sequence, this means that particularamino acids have remained the same throughoutevolution. Consequently, they have very similar roles inrepressing Hedgehogsignalling. Itrepresses the Gli and Citranscription factors of the Hedgehog pathway,[14] and functions bybinding to theseproteins and preventing theirtranslocation to thenucleus.Homologues of Sufu have been found inbacteria. However their function remains to be elucidated.

Structure

[edit]

Sufu is actually protein that contains two domains.[8] Ineukaryotic Sufu, an additional domain is found at the C terminus of the protein. This protein domain alsobinds to theC-terminal domain of the Gli/Citranscription factors, inhibiting their activity.[5]

Genes

[edit]

Human gene that encodes SUFU, also named SUFU, is found to be localized onchromosome 10q24–25, and contains 12exons.[14]

References

[edit]
  1. ^abcGRCh38: Ensembl release 89: ENSG00000107882Ensembl, May 2017
  2. ^abcGRCm38: Ensembl release 89: ENSMUSG00000025231Ensembl, May 2017
  3. ^"Human PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^"Mouse PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^abMerchant M, Vajdos FF, Ultsch M, Maun HR, Wendt U, Cannon J, Desmarais W, Lazarus RA, de Vos AM, de Sauvage FJ (Sep 2004)."Suppressor of fused regulates Gli activity through a dual binding mechanism".Mol Cell Biol.24 (19):8627–41.doi:10.1128/MCB.24.19.8627-8641.2004.PMC 516763.PMID 15367681.
  6. ^ab"Entrez Gene: SUFU suppressor of fused homolog (Drosophila)".
  7. ^Taylor MD, Liu L, Raffel C, Hui CC, Mainprize TG, Zhang X, Agatep R, Chiappa S, Gao L, Lowrance A, Hao A, Goldstein AM, Stavrou T, Scherer SW, Dura WT, Wainwright B, Squire JA, Rutka JT, Hogg D (July 2002). "Mutations in SUFU predispose to medulloblastoma".Nat. Genet.31 (3):306–10.doi:10.1038/ng916.PMID 12068298.S2CID 6882566.
  8. ^abDas D, Finn RD, Abdubek P, Astakhova T, Axelrod HL, Bakolitsa C, et al. (2010)."The crystal structure of a bacterial Sufu-like protein defines a novel group of bacterial proteins that are similar to the N-terminal domain of human Sufu".Protein Sci.19 (11):2131–40.doi:10.1002/pro.497.PMC 3005784.PMID 20836087.
  9. ^Stone DM, Murone M, Luoh S, Ye W, Armanini MP, Gurney A, Phillips H, Brush J, Goddard A, de Sauvage FJ, Rosenthal A (December 1999). "Characterization of the human suppressor of fused, a negative regulator of the zinc-finger transcription factor Gli".J. Cell Sci.112 (23):4437–48.doi:10.1242/jcs.112.23.4437.PMID 10564661.
  10. ^Kogerman P, Grimm T, Kogerman L, Krause D, Undén AB, Sandstedt B, Toftgård R, Zaphiropoulos PG (September 1999)."Mammalian suppressor-of-fused modulates nuclear-cytoplasmic shuttling of Gli-1".Nat. Cell Biol.1 (5):312–9.doi:10.1038/13031.PMID 10559945.S2CID 6907964.
  11. ^Dunaeva M, Michelson P, Kogerman P, Toftgard R (February 2003)."Characterization of the physical interaction of Gli proteins with SUFU proteins".J. Biol. Chem.278 (7):5116–22.doi:10.1074/jbc.M209492200.PMID 12426310.
  12. ^Humke EW, Dorn KV, Milenkovic L, Scott MP, Rohatgi R (April 2010)."The output of Hedgehog signaling is controlled by the dynamic association between Suppressor of Fused and the Gli proteins".Genes Dev.24 (7):670–82.doi:10.1101/gad.1902910.PMC 2849124.PMID 20360384.
  13. ^Rual JF, Venkatesan K, Hao T, Hirozane-Kishikawa T, Dricot A, Li N, Berriz GF, Gibbons FD, Dreze M, Ayivi-Guedehoussou N, Klitgord N, Simon C, Boxem M, Milstein S, Rosenberg J, Goldberg DS, Zhang LV, Wong SL, Franklin G, Li S, Albala JS, Lim J, Fraughton C, Llamosas E, Cevik S, Bex C, Lamesch P, Sikorski RS, Vandenhaute J, Zoghbi HY, Smolyar A, Bosak S, Sequerra R, Doucette-Stamm L, Cusick ME, Hill DE, Roth FP, Vidal M (October 2005). "Towards a proteome-scale map of the human protein-protein interaction network".Nature.437 (7062):1173–8.Bibcode:2005Natur.437.1173R.doi:10.1038/nature04209.PMID 16189514.S2CID 4427026.
  14. ^abRubin JB, Rowitch DH (July 2002)."Medulloblastoma: a problem of developmental biology".Cancer Cell.2 (1):7–8.doi:10.1016/S1535-6108(02)00090-9.PMID 12150819.

Further reading

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This article incorporates text from the public domainPfam andInterPro:IPR020941

External links

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