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STRC

From Wikipedia, the free encyclopedia
Protein-coding gene in the species Homo sapiens

STRC
Identifiers
AliasesSTRC, DFNB16, stereocilin
External IDsOMIM:606440;MGI:2153816;HomoloGene:15401;GeneCards:STRC;OMA:STRC - orthologs
Gene location (Human)
Chromosome 15 (human)
Chr.Chromosome 15 (human)[1]
Chromosome 15 (human)
Genomic location for STRC
Genomic location for STRC
Band15q15.3Start43,599,563bp[1]
End43,618,800bp[1]
Gene location (Mouse)
Chromosome 2 (mouse)
Chr.Chromosome 2 (mouse)[2]
Chromosome 2 (mouse)
Genomic location for STRC
Genomic location for STRC
Band2|2 E5Start121,194,209bp[2]
End121,217,649bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • right hemisphere of cerebellum

  • right frontal lobe

  • right testis

  • left testis

  • primary visual cortex

  • Brodmann area 9

  • middle temporal gyrus

  • Brodmann area 23

  • endothelial cell

  • anterior cingulate cortex
Top expressed in
  • utricle

  • vestibular sensory epithelium

  • vestibular membrane of cochlear duct

  • blastocyst

  • superior frontal gyrus

  • cochlea

  • esophagus

  • stomach

  • brain stem

  • midbrain tegmentum
More reference expression data
BioGPS
n/a
Orthologs
SpeciesHumanMouse
Entrez

161497

140476

Ensembl

ENSG00000242866

ENSMUSG00000033498

UniProt

Q7RTU9

Q8VIM6

RefSeq (mRNA)

NM_153700

NM_080459

RefSeq (protein)

NP_714544

NP_536707

Location (UCSC)Chr 15: 43.6 – 43.62 MbChr 2: 121.19 – 121.22 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Stereocilin is aprotein that in humans is encoded by theSTRCgene.[5][6][7]

TheSTRC gene provides instructions for creating a protein calledstereocilin, named for its location outside the stereocilia cells in the inner ear. This protein is associated with thehair bundle of the sensory hair cells in the inner ear. The hair bundle is composed of stiffmicrovilli calledstereocilia and is involved withmechanoreception of sound waves. Stereocilia cells generate an electrical response to the vibrations of sound waves, crucial for normal hearing.

This gene is part of a tandem duplication on chromosome 15; the second copy is apseudogene. Impairment of theSTRC gene leads to the production of a non-functional stereocilin or prevents its production altogether. Consequently, this results in instability in the structure of stereocilia, hindering their optimal response to the passage of sound waves. In the end, the hair cells fail to convert sound waves into electrical potentials, causing hearing impairment. Hence, mutations in this gene cause autosomal recessivenon-syndromic deafness.[7][8]

Mutations inSTRC is the most common cause of moderatebilateral hearing loss, accounting for approximately 30% of cases.[9] The prevalence of hearing loss due to alterations in theSTRC gene is estimated at 1 in 1600.[10]

99% of the genetic alterations in the STRC gene associated with non-syndromic hearing loss involve largecopy number variations. Often, the alteration is a large deletion on chromosome 15, including several genes, among themSTRC. In some cases, this deletion includes theCATSPER2 gene, which can lead to fertility issues in males.

References

[edit]
  1. ^abcGRCh38: Ensembl release 89: ENSG00000242866Ensembl, May 2017
  2. ^abcGRCm38: Ensembl release 89: ENSMUSG00000033498Ensembl, May 2017
  3. ^"Human PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^"Mouse PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^Verpy E, Masmoudi S, Zwaenepoel I, Leibovici M, Hutchin TP, Del Castillo I, et al. (November 2001). "Mutations in a new gene encoding a protein of the hair bundle cause non-syndromic deafness at the DFNB16 locus".Nature Genetics.29 (3):345–349.doi:10.1038/ng726.PMID 11687802.S2CID 23062750.
  6. ^Campbell DA, McHale DP, Brown KA, Moynihan LM, Houseman M, Karbani G, et al. (December 1997)."A new locus for non-syndromal, autosomal recessive, sensorineural hearing loss (DFNB16) maps to human chromosome 15q21-q22".Journal of Medical Genetics.34 (12):1015–1017.doi:10.1136/jmg.34.12.1015.PMC 1051155.PMID 9429146.
  7. ^ab"Entrez Gene: STRC stereocilin".
  8. ^Verpy E, Leibovici M, Michalski N, Goodyear RJ, Houdon C, Weil D, et al. (February 2011)."Stereocilin connects outer hair cell stereocilia to one another and to the tectorial membrane".The Journal of Comparative Neurology.519 (2):194–210.doi:10.1002/cne.22509.PMC 3375590.PMID 21165971.
  9. ^Sloan-Heggen CM, Bierer AO, Shearer AE, Kolbe DL, Nishimura CJ, Frees KL, et al. (April 2016)."Comprehensive genetic testing in the clinical evaluation of 1119 patients with hearing loss".Human Genetics.135 (4):441–450.doi:10.1007/s00439-016-1648-8.PMC 4796320.PMID 26969326.
  10. ^Knijnenburg J, Oberstein SA, Frei K, Lucas T, Gijsbers AC, Ruivenkamp CA, et al. (June 2009)."A homozygous deletion of a normal variation locus in a patient with hearing loss from non-consanguineous parents"(PDF).Journal of Medical Genetics.46 (6):412–417.doi:10.1136/jmg.2008.063685.PMID 19246478.S2CID 13630829.

Further reading

[edit]
Proteins ofepithelium
Lateral/cell–cell
Basal/cell–matrix
Apical
Arrestin
Membrane-spanning 4A
Myelin
Pulmonary surfactant
Tetraspanin
Other/ungrouped
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