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SOCS4

From Wikipedia, the free encyclopedia
Protein-coding gene in the species Homo sapiens
SOCS4
Available structures
PDBOrtholog search:PDBeRCSB
List of PDB id codes

2IZV

Identifiers
AliasesSOCS4, SOCS7, suppressor of cytokine signaling 4
External IDsOMIM:616337;MGI:1914546;HomoloGene:15442;GeneCards:SOCS4;OMA:SOCS4 - orthologs
Gene location (Human)
Chromosome 14 (human)
Chr.Chromosome 14 (human)[1]
Chromosome 14 (human)
Genomic location for SOCS4
Genomic location for SOCS4
Band14q22.3Start55,027,230bp[1]
End55,049,489bp[1]
Gene location (Mouse)
Chromosome 14 (mouse)
Chr.Chromosome 14 (mouse)[2]
Chromosome 14 (mouse)
Genomic location for SOCS4
Genomic location for SOCS4
Band14|14 C1Start47,514,388bp[2]
End47,533,559bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • pancreatic epithelial cell

  • tibia

  • visceral pleura

  • parietal pleura

  • tail of epididymis

  • germinal epithelium

  • mucosa of ileum

  • mucosa of paranasal sinus

  • cardiac muscle tissue of right atrium

  • tibialis anterior muscle
Top expressed in
  • medial ganglionic eminence

  • conjunctival fornix

  • vestibular membrane of cochlear duct

  • epithelium of small intestine

  • carotid body

  • atrioventricular valve

  • lymph node

  • trigeminal ganglion

  • lumbar spinal ganglion

  • hair follicle
More reference expression data
BioGPS
n/a
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo /QuickGO
Orthologs
SpeciesHumanMouse
Entrez

122809

67296

Ensembl

ENSG00000180008

ENSMUSG00000048379

UniProt

Q8WXH5

Q91ZA6

RefSeq (mRNA)

NM_080867
NM_199421

NM_080843

RefSeq (protein)

NP_543143
NP_955453

NP_543119

Location (UCSC)Chr 14: 55.03 – 55.05 MbChr 14: 47.51 – 47.53 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Suppressor of cytokine signaling 4 is aprotein that in humans is encoded by the SOCS4gene.[5]

Function

[edit]

The protein encoded by this gene contains a SH2 domain and a SOCS BOX domain. The protein thus belongs to the suppressor of cytokine signaling (SOCS), also known as STAT-induced STAT inhibitor (SSI), protein family. SOCS family members are known to be cytokine-inducible negative regulators of cytokine signaling. Two alternatively spliced transcript variants encoding the same protein have been found for this gene.

References

[edit]
  1. ^abcGRCh38: Ensembl release 89: ENSG00000180008Ensembl, May 2017
  2. ^abcGRCm38: Ensembl release 89: ENSMUSG00000048379Ensembl, May 2017
  3. ^"Human PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^"Mouse PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^"Entrez Gene: Suppressor of cytokine signaling 4". Retrieved2016-02-23.

Further reading

[edit]

This article incorporates text from theUnited States National Library of Medicine, which is in thepublic domain.


External links

[edit]
  • PDBe-KB provides an overview of all the structure information available in the PDB for Human Suppressor of cytokine signaling 4 (SOCS4)


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