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SNX2

From Wikipedia, the free encyclopedia
Protein-coding gene in the species Homo sapiens
SNX2
Identifiers
AliasesSNX2, TRG-9, sorting nexin 2
External IDsOMIM:605929;MGI:1915054;HomoloGene:2332;GeneCards:SNX2;OMA:SNX2 - orthologs
Gene location (Human)
Chromosome 5 (human)
Chr.Chromosome 5 (human)[1]
Chromosome 5 (human)
Genomic location for SNX2
Genomic location for SNX2
Band5q23.2Start122,775,079bp[1]
End122,834,543bp[1]
Gene location (Mouse)
Chromosome 18 (mouse)
Chr.Chromosome 18 (mouse)[2]
Chromosome 18 (mouse)
Genomic location for SNX2
Genomic location for SNX2
Band18|18 D1Start53,309,388bp[2]
End53,353,937bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • monocyte

  • Achilles tendon

  • islet of Langerhans

  • ventricular zone

  • gallbladder

  • rectum

  • ganglionic eminence

  • Descending thoracic aorta

  • popliteal artery

  • tibial arteries
Top expressed in
  • blastocyst

  • yolk sac

  • spleen

  • sciatic nerve

  • placenta

  • morula

  • morula

  • olfactory epithelium

  • uterus

  • stomach
More reference expression data
BioGPS


More reference expression data
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo /QuickGO
Orthologs
SpeciesHumanMouse
Entrez

6643

67804

Ensembl

ENSG00000205302

ENSMUSG00000034484

UniProt

O60749

Q9CWK8

RefSeq (mRNA)

NM_003100
NM_001278199

NM_026386
NM_001357463

RefSeq (protein)

NP_001265128
NP_003091

NP_080662
NP_001344392

Location (UCSC)Chr 5: 122.78 – 122.83 MbChr 18: 53.31 – 53.35 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Sorting nexin-2 is aprotein that in humans is encoded by theSNX2gene.[5][6]

Function

[edit]

This gene encodes a member of thesorting nexin family. Members of this family contain aphox (PX) domain, which is aphosphoinositide binding domain, and are involved in intracellular trafficking. This protein associates with formin-binding protein 17, but its function is unknown. This protein may formoligomeric complexes with family members.[6]

Interactions

[edit]

SNX2 has been shown tointeract withFNBP1.[7][8]

References

[edit]
  1. ^abcGRCh38: Ensembl release 89: ENSG00000205302Ensembl, May 2017
  2. ^abcGRCm38: Ensembl release 89: ENSMUSG00000034484Ensembl, May 2017
  3. ^"Human PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^"Mouse PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^Haft CR, de la Luz Sierra M, Barr VA, Haft DH, Taylor SI (Dec 1998)."Identification of a family of sorting nexin molecules and characterization of their association with receptors".Molecular and Cellular Biology.18 (12):7278–87.doi:10.1128/mcb.18.12.7278.PMC 109309.PMID 9819414.
  6. ^ab"Entrez Gene: SNX2 sorting nexin 2".
  7. ^Fuchs U, Rehkamp GF, Slany R, Follo M, Borkhardt A (Nov 2003). "The formin-binding protein 17, FBP17, binds via a TNKS binding motif to tankyrase, a protein involved in telomere maintenance".FEBS Letters.554 (1–2):10–6.doi:10.1016/S0014-5793(03)01063-9.PMID 14596906.S2CID 19552309.
  8. ^Fuchs U, Rehkamp G, Haas OA, Slany R, Kōnig M, Bojesen S, Bohle RM, Damm-Welk C, Ludwig WD, Harbott J, Borkhardt A (Jul 2001)."The human formin-binding protein 17 (FBP17) interacts with sorting nexin, SNX2, and is an MLL-fusion partner in acute myelogeneous leukemia".Proceedings of the National Academy of Sciences of the United States of America.98 (15):8756–61.Bibcode:2001PNAS...98.8756F.doi:10.1073/pnas.121433898.PMC 37508.PMID 11438682.

Further reading

[edit]
SNX-BAR
SNX-PX
SNX-Other
Related articles


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