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Zinc transporter ZIP9

From Wikipedia, the free encyclopedia
(Redirected fromSLC39A9)
Protein found in humans
SLC39A9
Identifiers
AliasesSLC39A9, ZIP-9, ZIP9, solute carrier family 39 member 9
External IDsMGI:1914820;HomoloGene:6935;GeneCards:SLC39A9;OMA:SLC39A9 - orthologs
Gene location (Human)
Chromosome 14 (human)
Chr.Chromosome 14 (human)[1]
Chromosome 14 (human)
Genomic location for SLC39A9
Genomic location for SLC39A9
Band14q24.1Start69,398,015bp[1]
End69,462,390bp[1]
Gene location (Mouse)
Chromosome 12 (mouse)
Chr.Chromosome 12 (mouse)[2]
Chromosome 12 (mouse)
Genomic location for SLC39A9
Genomic location for SLC39A9
Band12|12 C3Start80,690,657bp[2]
End80,730,116bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • parotid gland

  • jejunal mucosa

  • corpus epididymis

  • mucosa of sigmoid colon

  • skin of thigh

  • islet of Langerhans

  • caput epididymis

  • stromal cell of endometrium

  • palpebral conjunctiva

  • skin of hip
Top expressed in
  • lacrimal gland

  • salivary gland

  • epithelium of stomach

  • submandibular gland

  • duodenum

  • large intestine

  • colon

  • molar

  • parotid gland

  • jejunum
More reference expression data
BioGPS
n/a
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo /QuickGO
Orthologs
SpeciesHumanMouse
Entrez

55334

328133

Ensembl

ENSG00000029364

ENSMUSG00000048833

UniProt

Q9NUM3

Q8BFU1

RefSeq (mRNA)
NM_001252148
NM_001252150
NM_001252151
NM_001252152
NM_018375

NM_001330185

NM_026244

RefSeq (protein)
NP_001239077
NP_001239079
NP_001239080
NP_001239081
NP_001317114

NP_060845

NP_080520

Location (UCSC)Chr 14: 69.4 – 69.46 MbChr 12: 80.69 – 80.73 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Zinc transporter ZIP9, also known asZrt- and Irt-like protein 9 (ZIP9) andsolute carrier family 39 member 9, is aprotein that in humans is encoded by theSLC39A9gene.[5] This protein is the ninth member out of 14 ZIP family proteins, and is amembrane androgen receptor (mAR)coupled toG proteins that is classified as azinc transporter protein.[5][6][7][8] ZIP family proteinstransportzinc metal from theextracellular environment intocells throughcell membrane.[6]

Classification and nomenclature

[edit]

Mammalian cells have two major groups ofzinc transporter proteins; the ones that export zinc from thecytoplasm to theextracellular space (efflux), which are calledZnT (SLC30 family), and ZIP (SLC39 family) proteins[9] whose functions are in the opposite direction (influx).[10] ZIP family proteins are named as Zrt- and Irt-like proteins because of their similarities toZrt and Irt proteins which are respectivelyzinc andiron -regulatedtransporter proteins inyeast andArabidopsis that were discovered earlier than ZIP and ZnT proteins.[10] ZIP family consists of four subfamilies (I, II, LIV-1, and gufA), and ZIP9 is the only member ofsubfamily I.[11]

Isoforms

[edit]

ZIP9 can be present as three differentisoforms in humancells. The canonicalisoform of this protein has a length of 307amino acids, with amolecular mass of32251 Da. In the second isoform, amino acids 135–157 are missing, so its length andmolecular weight are respectively reduced to 284 amino acids and29931 Da. In the third isoform the amino acids 233–307 are missing, so the isoform only has 232 amino acids and its molecular mass is24626 Da. Additionally, the last amino acid of isoform 3, which is usuallyserine, is replaced withaspartic acid.[12]

ZIP9 Isoforms and Sizes[12]
Isoformnumber of amino acidssize (Da)transformationmissing amino acids
isoform 130732251N/AN/A
isoform 228429931N/A135-157
isoform 323224626S -----> D233-307

Discovery

[edit]

ZIP9membrane androgen receptor was first discovered inAtlantic croaker (Micropogonias undulatus)brain,ovary andtesticulartissues and named "AR2" in 1999, together with anotherandrogen receptor which was found only in brain tissue, and it was named "AR1" in that time.[13] AR1 and AR2 were first thought to benuclear androgen receptors (nAR), however, further studies on theirbiochemical andfunctional features in 2003 illustrated that they were involved innon-genomic mechanisms in theplasma membrane of the cells and weremembrane androgen receptors.[14] In 2005, the similarities between thenucleotide and amino acidsequences of AR2 and ZIP family proteins were discovered in othervertebrates, suggesting that AR2 is from this family of proteins.[15] A study in 2014 utilised the latest research technologies toclone andexpress a particularcDNA of the female Atlantic croaker ovaries, whichencoded a protein showing the characteristics of the canonical isoform of ZIP9, as a novelmembrane androgen receptor(mAR).[7]

The seven-transmembrane α-helix structure of a G protein–coupled receptor, with intracellular C-terminus

Structure

[edit]

Unlike other ZIP subfamilies that are consisted of 8transmembrane (TM)domains with anextracellularC-terminal, ZIP9 consists of a 7 TM structure with anintracellular C-terminus.[7] ZIP9 is shorter than other ZIP proteins, and only has about 307 amino acids within its structure, however, like other ZIP proteins, between its domains III and IV, within the intracellularloop, it containshistidine-rich clusters.[7] ZIP9 and other ZIP proteins havepolar orcharged amino acids in their TM domains which probably play important roles in makingion transfer channels and therefore in importing zinc ions into cytoplasm.[15]

Location, expression and function

[edit]
The image illustrates the location of different zinc transporters in a cell, including ZIP9, which is located at Golgi here.[16]

ZIP9influxeszinc ions into thecytosol and its gene isexpressed almost in everytissue of human body.[8] Thesub-cellular location of ZIP9 is inplasma,nucleus,endoplasmic reticulum andmitochondrial membrane.[8] One of the responsibilities of ZIP9 is thehomeostasis ofzinc in thesecretory pathway, during which this protein stays within the TransGolgi Network regardless of the change in theconcentrations of zinc.[11]

ZIP9 is the only ZIP protein thatsignals throughG protein binding, andpharmaceutical agents decrease itsligand binding once ZIP9 is uncoupled from G proteins.[5] ZIP9 is also the only member of ZIP family withmAR characteristics.[5]

Ligands

[edit]

Testosterone has highaffinity for ZIP9 with aKd of 14 nM and acts as anagonist of the receptor.[5] In contrast, the otherendogenousandrogensdihydrotestosterone (DHT) andandrostenedione show lowaffinity for the receptor with less than 1% of that of testosterone, although DHT is still effective in activating thereceptor at sufficiently high concentrations.[5] Moreover, thesynthetic androgensmibolerone andmetribolone (R-1881), the endogenous androgen11-ketotestoterone, and the othersteroid hormonesestradiol andcortisol are all ineffective competitors for the receptor.[5] Since mibolerone and metribolone bind to and activate the nuclearandrogen receptor (AR) but not ZIP9, they could potentially be employed to differentiate between AR- and ZIP9-mediated responses of testosterone.[5] Thenonsteroidal antiandrogenbicalutamide has been identified as anantagonist of ZIP9.[17]

Clinical significance

[edit]

Zinchomeostasis is very important in human health, because zinc is present in thestructure of some proteins like zinc-dependentmetalloenzymes andzinc-finger-containing transcriptional factors.[18] In addition, zinc is involved insignalling forcell growth,proliferation,division andapoptosis.[18][19] As a result, any dysfunction ofzinc transporter proteins can be harmful for the cells, and some of them are associated with differentcancers,diabetes andinflammation.[18] For instance, through activation of ZIP9,testosterone has been found to increaseintracellularzinc levels inbreast cancer,prostate cancer, andovarian folliclecells and to induceapoptosis in these cells, an action which may be mediated partially or fully by increased zinc concentrations.[5][20]

Gene mutations

[edit]

Mutations in the SLC39A9 gene can occur due togenetic deletion of the q24.1-24.3 band of base pairs within the human chromosome 14. This interstitial deletionmutation deletes the SLC39A9 gene along with 18 other genes found close to the SLC39A9 gene on chromosome 14 Although specific gene associated diseases have not been determined, the deletion of this band causes diseases such ascongenital heart defects, mildintellectual disability,brachydactyly, and all patients with band deletion hadhypertelorism and a broadnasal bridge. Patient specific clinical issues includedectopic organs, undescended testes, also calledcryptorchidism, and malrotation of the small intestine.Deletion mutation involving the SLC39A9 gene has also been reported in 23 cases of patients with circulation related cancers such asB-cell lymphoma andB-cell chronic lymphocytic leukaemia (CLL).[21][22]Chimeric genes are a result of faultyDNA replication, and arise when two or more coding sequences of the same or different chromosome combine in order to produce a single new gene. SLC39A9 forms achimeric gene product with a gene called PLEKHD1, that codes for an intracellular protein found within thecerebellum. A study done in Seattle, USA, established the presence of the fusion protein product of the SLC39A9-PLEKHD1 gene to be present in 124 cases ofschizophrenia and was closely related to the pathophysiology of disease.[23][24] The fusion protein had features from both the parent genes and also possessed the ability to interact with cellular signalling pathways involving kinases such asAkt andErk, leading to their increased phosphorylation within the brain and a consequent onset of schizophrenia.[23][24]SLC39A9 gene also forms a fusion transcript with another gene calledMAP3K9, that encodes for MAP3 kinase enzyme. This SLC39A9-MAP3K9 fusion gene has a repetitive occurrence inbreast cancers, demonstrated by a study done on 120 primary breast cancer samples from Korean women in 2015.[25][26]

Cancer

[edit]

Breast and prostate

[edit]

A study in 2014, elucidated the intermediary role of ZIP9 in causing humanbreast andprostate cancer, as it induced theapoptosis in the presence of testosterone in breast and prostate cancerous cells.[8] unlikeZIP1,2 and3, ZIP9mRNAexpression was increased in human prostate and breastmalignantbiopsy cancer cells, which probably was becausecells that divide rapidly require more zinc.[8]

Brain

[edit]

Treatment ofglioblastoma cells withTPEN showed thatupregulation of ZIP9 in glioblastoma cells enhancescell migration inbrain cancer by influencingP53 andGSK-3ß, and alsoERK andAKTsignalling pathways inphosphorylation afteractivation ofB-cell receptors.[18][27]

Diabetes

[edit]

Zinc must be constantly supplied toPancreatic β-cells to function normally and maintainglycaemic control.[19] Theinsulin secretory pathway in humans is highly dependent on zinc activities.[28] The cells lose many zinc ions during the secretion ofinsulin, and need to receive more zinc, andexpression of ZIP9mRNA during this process increases.[29] As a result, ZIP9, which is involved in importing zinc into the cells, is potentially a target fortherapeutic studies in the future regardingdiabetes type2.[29]

See also

[edit]

References

[edit]
  1. ^abcGRCh38: Ensembl release 89: ENSG00000029364Ensembl, May 2017
  2. ^abcGRCm38: Ensembl release 89: ENSMUSG00000048833Ensembl, May 2017
  3. ^"Human PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^"Mouse PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^abcdefghiThomas P, Converse A, Berg HA (May 2017). "ZIP9, a novel membrane androgen receptor and zinc transporter protein".General and Comparative Endocrinology.257:130–136.doi:10.1016/j.ygcen.2017.04.016.PMID 28479083.
  6. ^abEide DJ (February 2004). "The SLC39 family of metal ion transporters".Pflügers Archiv.447 (5):796–800.doi:10.1007/s00424-003-1074-3.PMID 12748861.S2CID 11765308.
  7. ^abcdBerg AH, Rice CD, Rahman MS, Dong J, Thomas P (November 2014)."Identification and characterization of membrane androgen receptors in the ZIP9 zinc transporter subfamily: I. Discovery in female atlantic croaker and evidence ZIP9 mediates testosterone-induced apoptosis of ovarian follicle cells".Endocrinology.155 (11):4237–49.doi:10.1210/en.2014-1198.PMC 4197986.PMID 25014354.
  8. ^abcdeThomas P, Pang Y, Dong J, Berg AH (November 2014)."Identification and characterization of membrane androgen receptors in the ZIP9 zinc transporter subfamily: II. Role of human ZIP9 in testosterone-induced prostate and breast cancer cell apoptosis".Endocrinology.155 (11):4250–65.doi:10.1210/en.2014-1201.PMC 4197988.PMID 25014355.
  9. ^Guerinot ML (2000). "The ZIP family of metal transporters".Biochimica et Biophysica Acta (BBA) - Biomembranes.1465 (1–2):190–8.doi:10.1016/S0005-2736(00)00138-3.PMID 10748254.
  10. ^abLichten LA, Cousins RJ (2009-07-22). "Mammalian zinc transporters: nutritional and physiologic regulation".Annual Review of Nutrition.29 (1):153–76.doi:10.1146/annurev-nutr-033009-083312.PMID 19400752.
  11. ^abMatsuura W, Yamazaki T, Yamaguchi-Iwai Y, Masuda S, Nagao M, Andrews GK, Kambe T (May 2009)."SLC39A9 (ZIP9) regulates zinc homeostasis in the secretory pathway: characterization of the ZIP subfamily I protein in vertebrate cells".Bioscience, Biotechnology, and Biochemistry.73 (5):1142–8.doi:10.1271/bbb.80910.PMID 19420709.S2CID 22746139.
  12. ^abUniversal protein resource accession numberQ9NUM3 atUniProt.
  13. ^Sperry TS, Thomas P (April 1999)."Characterization of two nuclear androgen receptors in Atlantic croaker: comparison of their biochemical properties and binding specificities".Endocrinology.140 (4):1602–11.doi:10.1210/endo.140.4.6631.PMID 10098494.
  14. ^Braun AM, Thomas P (November 2003)."Androgens inhibit estradiol-17beta synthesis in Atlantic croaker (Micropogonias undulatus) ovaries by a nongenomic mechanism initiated at the cell surface".Biology of Reproduction.69 (5):1642–50.doi:10.1095/biolreprod.103.015479.PMID 12855603.
  15. ^abEide DJ (2005). "The Zip Family of Zinc Transporters". In Iuchi S, Kuldell N (eds.).Zinc Finger Proteins. Molecular Biology Intelligence Unit. Boston, MA: Molecular Biology Intelligence Unit. Springer. pp. 261–264.doi:10.1007/0-387-27421-9_35.ISBN 978-0-306-48229-8.
  16. ^Zhao L, Xia Z, Wang F (2014)."Zebrafish in the sea of mineral (iron, zinc, and copper) metabolism".Frontiers in Pharmacology.5: 33.doi:10.3389/fphar.2014.00033.PMC 3944790.PMID 24639652.
  17. ^Bulldan A, Malviya VN, Upmanyu N, Konrad L, Scheiner-Bobis G (2017). "Testosterone/bicalutamide antagonism at the predicted extracellular androgen binding site of ZIP9".Biochim. Biophys. Acta.1864 (12):2402–2414.doi:10.1016/j.bbamcr.2017.09.012.PMID 28943399.
  18. ^abcdTaniguchi M, Fukunaka A, Hagihara M, Watanabe K, Kamino S, Kambe T, Enomoto S, Hiromura M (2013)."Essential role of the zinc transporter ZIP9/SLC39A9 in regulating the activations of Akt and Erk in B-cell receptor signaling pathway in DT40 cells".PLOS ONE.8 (3) e58022.Bibcode:2013PLoSO...858022T.doi:10.1371/journal.pone.0058022.PMC 3591455.PMID 23505453.
  19. ^abLi YV (March 2014). "Zinc and insulin in pancreatic beta-cells".Endocrine.45 (2):178–89.doi:10.1007/s12020-013-0032-x.PMID 23979673.S2CID 5153213.
  20. ^Pascal LE, Wang Z (November 2014)."Unzipping androgen action through ZIP9: a novel membrane androgen receptor".Endocrinology.155 (11):4120–3.doi:10.1210/en.2014-1749.PMID 25325426.
  21. ^Nagel I, Bug S, Tonnies H, Ammerpohl O, Richter J, Vater I, Callet-Bauchu E, Calasanz MJ, Martinez-Climent JA, Bastard C, Salido, M (August 2009)."Biallelic inactivation of TRAF3 in a subset of B-cell lymphomas with interstitial del (14)(q24. 1 q32. 33)".Leukemia.23 (11):2153–2156.doi:10.1038/leu.2009.149.PMID 19693093.
  22. ^"Biallelic inactivation of TRAF3 in a subset of B-cell lymphomas with interstitial del (14)(q24. 1 q32. 33)".{{cite web}}:Missing or empty|url= (help)
  23. ^abRippey C, Walsh T, Gulsuner S, Brodsky M, Nord AS, Gasperini M, Pierce S, Spurrell C, Coe BP, Krumm N, Lee MK (October 2013)."Formation of chimeric genes by copy-number variation as a mutational mechanism in schizophrenia".The American Journal of Human Genetics.93 (4):697–710.doi:10.1016/j.ajhg.2013.09.004.PMC 3791253.PMID 24094746.
  24. ^ab"Formation of chimeric genes by copy-number variation as a mutational mechanism in schizophrenia".{{cite web}}:Missing or empty|url= (help)
  25. ^Kim J, Kim S, Ko S, In YH, Moon HG, Ahn SK, Kim MK, Lee M, Hwang JH, Ju YS, Kim JI (November 2015). "Recurrent fusion transcripts detected by whole‐transcriptome sequencing of 120 primary breast cancer samples".Genes, Chromosomes and Cancer.54 (11):681–691.doi:10.1002/gcc.22279.hdl:10371/122075.PMID 26227178.S2CID 22740643.
  26. ^"Recurrent fusion transcripts detected by whole‐transcriptome sequencing of 120 primary breast cancer samples".{{cite web}}:Missing or empty|url= (help)
  27. ^Münnich N, Wernhart S, Hogstrand C, Schlomann U, Nimsky C, Bartsch JW (December 2016). "Expression of the zinc importer protein ZIP9/SLC39A9 in glioblastoma cells affects phosphorylation states of p53 and GSK-3β and causes increased cell migration".Biometals.29 (6):995–1004.doi:10.1007/s10534-016-9971-z.PMID 27654922.S2CID 20068444.
  28. ^Huang L (2014). "Zinc and its transporters, pancreatic β-cells, and insulin metabolism".Vitamins and Hormones.95:365–90.doi:10.1016/b978-0-12-800174-5.00014-4.ISBN 978-0-12-800174-5.PMID 24559925.
  29. ^abLawson R, Maret W, Hogstrand C (September 2017)."Expression of the ZIP/SLC39A transporters in β-cells: a systematic review and integration of multiple datasets".BMC Genomics.18 (1): 719.doi:10.1186/s12864-017-4119-2.PMC 5594519.PMID 28893192.
By group
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(11):
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SLC21–30
(21):
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SLC31–40
(31):
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SLCO1–4
Symporter,Cotransporter
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ARTooltip Androgen receptor
Agonists
SARMsTooltip Selective androgen receptor modulator
Antagonists
GPRC6A
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