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SLC22A1

From Wikipedia, the free encyclopedia
Protein-coding gene in the species Homo sapiens

SLC22A1
Identifiers
AliasesSLC22A1, HOCT1, OCT1, oct1_cds, solute carrier family 22 member 1
External IDsOMIM:602607;MGI:108111;HomoloGene:20665;GeneCards:SLC22A1;OMA:SLC22A1 - orthologs
Gene location (Human)
Chromosome 6 (human)
Chr.Chromosome 6 (human)[1]
Chromosome 6 (human)
Genomic location for SLC22A1
Genomic location for SLC22A1
Band6q25.3Start160,121,815bp[1]
End160,158,718bp[1]
Gene location (Mouse)
Chromosome 17 (mouse)
Chr.Chromosome 17 (mouse)[2]
Chromosome 17 (mouse)
Genomic location for SLC22A1
Genomic location for SLC22A1
Band17 A1|17 8.63 cMStart12,867,756bp[2]
End12,894,716bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • right lobe of liver

  • cartilage tissue

  • testicle

  • blood

  • granulocyte

  • spleen

  • stromal cell of endometrium

  • left lobe of thyroid gland

  • sural nerve

  • gastrocnemius muscle
Top expressed in
  • right kidney

  • left lobe of liver

  • human kidney

  • proximal tubule

  • Ileal epithelium

  • duodenum

  • atrioventricular valve

  • jejunum

  • Paneth cell

  • gallbladder
More reference expression data
BioGPS
More reference expression data
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo /QuickGO
Orthologs
SpeciesHumanMouse
Entrez

6580

20517

Ensembl

ENSG00000175003

ENSMUSG00000023829

UniProt

O15245

O08966

RefSeq (mRNA)

NM_003057
NM_153187

NM_009202

RefSeq (protein)

NP_003048
NP_694857

NP_033228

Location (UCSC)Chr 6: 160.12 – 160.16 MbChr 17: 12.87 – 12.89 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Solute carrier family 22 member 1 is aprotein that in humans is encoded by thegeneSLC22A1.[5][6]

Function

[edit]

Polyspecific organic cation transporters in the liver, kidney, intestine, and other organs are critical for elimination of many endogenous small organic cations as well as a wide array of drugs and environmental toxins. This gene is one of three similar cation transporter genes located in a cluster on chromosome 6. The encoded protein contains twelve putative transmembrane domains and is a plasma integral membrane protein. Two transcript variants encoding two different isoforms have been found for this gene, but only the longer variant encodes a functional transporter.[6]

It is also required for the uptake ofmetformin by cells.[7][8]

See also

[edit]

References

[edit]
  1. ^abcGRCh38: Ensembl release 89: ENSG00000175003Ensembl, May 2017
  2. ^abcGRCm38: Ensembl release 89: ENSMUSG00000023829Ensembl, May 2017
  3. ^"Human PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^"Mouse PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^Koehler MR, Wissinger B, Gorboulev V, Koepsell H, Schmid M (Jun 1998). "The two human organic cation transporter genes SLC22A1 and SLC22A2 are located on chromosome 6q26".Cytogenetics and Cell Genetics.79 (3–4):198–200.doi:10.1159/000134720.PMID 9605850.
  6. ^ab"Entrez Gene: SLC22A1 solute carrier family 22 (organic cation transporter), member 1".
  7. ^Pryor R, Cabreiro F, Haberland G (16 October 2015)."Repurposing metformin: an old drug with new tricks in its binding pockets".The Biochemical Journal.471 (3):307–322.doi:10.1042/BJ20150497.PMC 4613459.PMID 26475449.
  8. ^Rosilio C, Ben-Sahra I, Bost F, Peyron J (1 May 2014). "Metformin: a metabolic disruptor and anti-diabetic drug to target human leukemia".Cancer Letters.346 (2):188–196.doi:10.1016/j.canlet.2014.01.006.PMID 24462823.

Further reading

[edit]

This article incorporates text from theUnited States National Library of Medicine, which is in thepublic domain.

By group
SLC1–10
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SLC11–20
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SLC21–30
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SLC31–40
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SLC41–48
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SLCO1–4
Symporter,Cotransporter
Antiporter (exchanger)
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