| Sedoreoviridae | |
|---|---|
 | |
| Cryo-EM reconstruction of arotavirus | |
Virus classification | |
| (unranked): | Virus |
| Realm: | Riboviria |
| Kingdom: | Orthornavirae |
| Phylum: | Duplornaviricota |
| Class: | Resentoviricetes |
| Order: | Reovirales |
| Family: | Sedoreoviridae |
| Subfamilies and genera | |
Sedoreoviridae (formerlyReoviridae) is afamily ofdouble-stranded RNA viruses. Member viruses have a widehost range, includingvertebrates,invertebrates, plants,protists and fungi.[1] They lack lipidenvelopes and package their segmented genome within multi-layeredcapsids. Lack of a lipid envelope has allowedthree-dimensional structures of these large complex viruses (diameter ~60–100nm) to be obtained, revealing a structural and likely evolutionary relationship to thecystovirus family ofbacteriophage.[2] There are currently 97species in this family, divided among 15genera in two subfamilies.[3] Reoviruses can affect thegastrointestinal system (such asrotaviruses) andrespiratory tract.[4] The name "reo-" is anacronym for "respiratoryentericorphan" viruses.[5] The term "orphan virus" refers to the fact that some of these viruses have been observed not associated with any known disease. Even though viruses in the familyReoviridae have more recently been identified with various diseases, the original name is still used.
Reovirus infections occur often in humans, but most cases are mild or subclinical.Rotaviruses, however, can cause severediarrhea and intestinal distress in children, and lab studies in mice have implicatedorthoreoviruses in the expression ofcoeliac disease in pre-disposed individuals.[6] The virus can be readily detected infeces, and may also be recovered frompharyngeal ornasal secretions, urine,cerebrospinal fluid, and blood. Despite the ease of finding reoviruses in clinical specimens, their role in human disease or treatment is still uncertain.
Some viruses of this family, such asphytoreoviruses andoryzaviruses, infect plants. Most of the plant-infecting reoviruses are transmitted between plants byinsect vectors. The virusesreplicate in both the plant and the insect, generally causing disease in the plant, but little or no harm to the infected insect.[7]: 148
Reoviruses are non-enveloped and have anicosahedralcapsid composed of an outer (T=13) and inner (T=2) protein shell.[1][8] Ultrastructure studies show that virion capsids are composed of two or three separate layers which depends on species type. The innermost layer (core) has T=1 icosahedral symmetry and is composed of 60 different types of structural proteins. The core contains the genome segments, each of them encode a variety enzyme structure which is required for transcription. The core is covered by capsid layer T=13 icosahedral symmetry. Reoviruses have a unique structure which contains a glycosylated spike protein on the surface.[9]
The genomes of viruses in familyReoviridae contain 9–12 segments which are grouped into three categories corresponding to their size: L (large), M (medium) and S (small). Segments range from about 0.2 to 3 kbp and each segment encodes 1–3 proteins (10–14 proteins in total[1]). Proteins of viruses in the familyReoviridae are denoted by the Greek character corresponding to the segment it was translated from (the L segment encodes for λ proteins, the M segment encodes for μ proteins and the S segment encodes for σ proteins).[8]
Viruses in the familyReoviridae have genomes consisting of segmented,double-stranded RNA (dsRNA).[4] Because of this, replication occurs exclusively in the cytoplasm, and the virus encodes several proteins which are needed for replication and conversion of the dsRNA genome into positive-sense RNAs.[10]
The virus can enter the host cell via a receptor on the cell surface. The receptor is not known but is thought to includesialic acid andjunctional adhesion molecules (JAMs).[10] The virus is partially uncoated by proteases in the endolysosome, where the capsid is partially digested to allow further cell entry. The core particle then enters the cytoplasm by a yet unknown process where the genome is transcribed conservatively causing an excess of positive-sense strands, which are used asmessenger RNA templates to synthesize negative-sense strands.[10]
The genome of the rotavirus is divided into 11 segments. These segments are associated with the VP1 molecule which is responsible for RNA synthesis. In early events, the selection process occurs so that the entry of the 11 different RNA segments go in the cell. This procedure is performed by newly synthesized RNAs. This event ensures that one each of the 11 different RNA segments is received. In late events, the transcription process occurs again but this time is not capped unlike the early events. For virus different amounts of RNAs are required therefore during the translation step there is a control machinery. There are the same quantities of RNA segments but different quantities of proteins. The reason for this is that the RNA segments are not translated at the same rate.[7]
Viral particles begin to assemble in the cytoplasm 6–7 hours after infection. Translation takes place by leaky scanning, suppression of termination, andribosomal skipping. The virus exits the host cell by monopartite non-tubule guided viral movement, cell to cell movement, and existing in occlusion bodies after cell death and remaining infectious until finding another host.[1]
| Genus | Host details | Tissue tropism | Entry details | Release details | Replication site | Assembly site | Transmission |
|---|---|---|---|---|---|---|---|
| Aquareovirus | Aquatic vertebrates: fish; aquatic invertebrates: shellfish; aquatic invertebrates: crustaceans | None | Cell receptor endocytosis | Cell death | Cytoplasm | Cytoplasm | Passive diffusion |
| Cardoreovirus | Crustaceans: crabs | None | Cell receptor endocytosis | Cell death | Cytoplasm | Cytoplasm | Arthropod bite |
| Coltivirus | Humans; rodents; ticks; mosquitoes | Erythrocytes | Cell receptor endocytosis | Cell death | Cytoplasm | Cytoplasm | Arthropod bite |
| Cypovirus | Insects | Midgut; goblet; fat | Cell receptor endocytosis | Cell death | Cytoplasm | Cytoplasm | Polyhedra: oral-fecal; vertical: eggs |
| Dinovernavirus | Insects; Mosquitoes | None | Unknown | Cell death | Cytoplasm | Cytoplasm | Unknown |
| Fijivirus | Plants: gramineae; plants: liliacea; planthoppers | Phloem | Viral movement; mechanical inoculation | Cell death | Cytoplasm | Cytoplasm | Delphacid plant hoppers |
| Idnoreovirus | Hymenoptera | Gut | Cell receptor endocytosis | Cell death | Cytoplasm | Cytoplasm | Unknown |
| Mimoreovirus | Algae | None | Cell receptor endocytosis | Cell death | Cytoplasm | Cytoplasm | Arthropod bite |
| Mycoreovirus | Fungi | Mycelium | Cell death; cytoplasmic exchange, sporogenesis; hyphal anastomosis | Cell death; cytoplasmic exchange, sporogenesis; hyphal anastomosis | Cytoplasm | Cytoplasm | Cytoplasmic exchange, sporogenesis; hyphal anastomosis |
| Orbivirus | Vertebrates; mosquitoes; midges; gnats; sandflies; ticks | None | Cell receptor endocytosis | Cell death | Cytoplasm | Cytoplasm | Arthropod bite |
| Orthoreovirus | Vertebrates | Epithelium: intestinal; epithelium:bile duct; epithelium: lung; leukocytes; endothelium: CNS | Clathrin-mediated endocytosis | Cell death | Cytoplasm | Cytoplasm | Aerosol; oral-fecal |
| Oryzavirus | Plants: graminae, Oryza sativa; planthoppers | None | Viral movement; mechanical | Cell death | Cytoplasm | Cytoplasm | Delphacid planthoppers |
| Phytoreovirus | Oryza sativa; leafhoppers | Phloem | Viral movement; mechanical inoculation | Cell death | Cytoplasm | Cytoplasm | Leafhoppers |
| Rotavirus | Humans; vertebrates | Intestinal mucosa | Clathrin-mediated endocytosis | Cell death | Cytoplasm | Cytoplasm | Oral-fecal |
| Seadornavirus | Humans; cattle; pigs; mosquitoes | None | Cell receptor endocytosis | Cell death | Cytoplasm | Cytoplasm | Zoonosis; arthropod bite |
Multiplicity reactivation (MR) is the process by which two or more virus genomes, each containing inactivating genome damage, can interact within an infected cell to form a viable virus genome. McClain and Spendlove[11] demonstrated MR for three types of reovirus after exposure to ultraviolet irradiation. In their experiments, reovirus particles were exposed to doses of UV-light that would be lethal in single infections. However, when two or more inactivated viruses were allowed to infect individual host cells MR occurred and viable progeny were produced. As they stated, multiplicity reactivation by definition involves some type of repair. Michod et al.[12] reviewed numerous examples of MR in different viruses, and suggested that MR is a common form of sexual interaction in viruses that provides the benefit of recombinational repair of genome damages.[citation needed]
The familyReoviridae is divided into two subfamilies[13] based on the presence of a "turret" protein on the inner capsid.[14][15] From ICTV communications: "The nameSpinareovirinae will be used to identify the subfamily containing the spiked or turreted viruses and is derived from 'reovirus' and the Latin word 'spina' as a prefix, which means spike, denoting the presence of spikes or turrets on the surface of the core particles. The term 'spiked' is an alternative to 'turreted', that was used in early research to describe the structure of the particle, particularly with the cypoviruses. The nameSedoreovirinae will be used to identify the subfamily containing the non-turreted virus genera and is derived from 'reovirus' and the Latin word 'sedo', which means smooth, denoting the absence of spikes or turrets from the core particles of these viruses, which have a relatively smooth morphology."[16]
The familyReoviridae is divided into the following subfamilies and genera:
Although reoviruses are mostly nonpathogenic in humans, these viruses have served as very productive experimental models for studies ofviral pathogenesis.[17] Newborn mice are extremely sensitive to reovirus infections and have been used as the preferred experimental system for studies of reovirus pathogenesis.[2]
Reoviruses have been demonstrated to haveoncolytic (cancer-killing) properties, encouraging the development of reovirus-based therapies for cancer treatment.[18][19][20]
Reolysin is a formulation of reovirus (Mammalian orthoreovirus serotype 3-dearing strain[21]) that is currently in clinical trials for the treatment of various cancers,[22] including studies currently developed to investigate the role of Reolysin combined with other immunotherapies.[21]
| Components |  | |
|---|---|---|
| Viral life cycle | ||
| Genetics | ||
| By host | ||
| Other | ||
