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RHCE (gene)

From Wikipedia, the free encyclopedia

Protein-coding gene in the species Homo sapiens
RHCE
Identifiers
AliasesRHCE, CD240CE, RH, RH30A, RHC, RHE, RHIXB, RHPI, Rh4, RhIVb(J), RhVI, RhVIII, Rh blood group CcEe antigens, RHCe(152N), RHNA
External IDsOMIM:111700;MGI:1202882;HomoloGene:7918;GeneCards:RHCE;OMA:RHCE - orthologs
Gene location (Human)
Chromosome 1 (human)
Chr.Chromosome 1 (human)[1]
Chromosome 1 (human)
Genomic location for RHCE
Genomic location for RHCE
Band1p36.11Start25,362,249bp[1]
End25,430,192bp[1]
Gene location (Mouse)
Chromosome 4 (mouse)
Chr.Chromosome 4 (mouse)[2]
Chromosome 4 (mouse)
Genomic location for RHCE
Genomic location for RHCE
Band4 D3|4 67.13 cMStart134,591,847bp[2]
End134,623,483bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • trabecular bone

  • bone marrow

  • testicle

  • gonad

  • bone marrow cell

  • endothelial cell

  • islet of Langerhans

  • blood

  • stromal cell of endometrium

  • gastric mucosa
Top expressed in
  • fetal liver hematopoietic progenitor cell

  • tibiofemoral joint

  • primary oocyte

  • human fetus

  • spleen

  • secondary oocyte

  • zygote

  • bone marrow

  • blood

  • femur
More reference expression data
BioGPS




More reference expression data
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo /QuickGO
Orthologs
SpeciesHumanMouse
Entrez

6006

19746

Ensembl

ENSG00000188672

ENSMUSG00000028825

UniProt

P18577

Q8CF94

RefSeq (mRNA)

NM_020485
NM_138616
NM_138617
NM_138618
NM_001330430

NM_011270

RefSeq (protein)

NP_001317359
NP_065231
NP_619522
NP_619523
NP_619524

NP_035400

Location (UCSC)Chr 1: 25.36 – 25.43 MbChr 4: 134.59 – 134.62 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Blood group Rh(CE) polypeptide is aprotein that in humans is encoded by theRHCEgene.[5][6] RHCE has also recently been designatedCD240CE (cluster of differentiation 240CE).

The Rhblood group system is the second most clinically significant of the blood groups, second only to ABO. It is also the most polymorphic of the blood groups, with variations due to deletions, gene conversions, and missense mutations. The Rh blood group includes this gene which encodes both the RhC and RhE antigens on a single polypeptide and a second gene which encodes the RhD protein. The classification of Rh-positive and Rh-negative individuals is determined by the presence or absence of the highly immunogenic RhD protein on the surface of erythrocytes. Alternative splicing of this gene results in four transcript variants encoding four different isoforms.[6]

A recent study in the population of the island ofSardinia shows the association of anoncoding variant in the RHCE gene (rs630337) with an increasederythrocyte sedimentation rate(ESR). This suggest a possible causal effect of thispolymorphism on this inflammatory marker despite not found in coding region of the gene.[7]

References

[edit]
  1. ^abcGRCh38: Ensembl release 89: ENSG00000188672Ensembl, May 2017
  2. ^abcGRCm38: Ensembl release 89: ENSMUSG00000028825Ensembl, May 2017
  3. ^"Human PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^"Mouse PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^Mouro I, Colin Y, Cherif-Zahar B, Cartron JP, Le Van Kim C (Dec 1993). "Molecular genetic basis of the human Rhesus blood group system".Nat Genet.5 (1):62–5.doi:10.1038/ng0993-62.PMID 8220426.S2CID 205342712.
  6. ^ab"Entrez Gene: RHCE Rh blood group, CcEe antigens".
  7. ^Sidore C, et al. (2015)."Genome sequencing elucidates Sardinian genetic architecture and augments association analyses for lipid and blood inflammatory markers".Nature Genetics.47 (11):1272–1281.doi:10.1038/ng.3368.PMC 4627508.PMID 26366554.

Further reading

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External links

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This article incorporates text from theUnited States National Library of Medicine, which is in thepublic domain.

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