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RFX6

From Wikipedia, the free encyclopedia
Transcription factor gene of the regulatory factor X family
RFX6
Identifiers
AliasesRFX6, MTCHRS, MTFS, RFXDC1, dJ955L16.1, regulatory factor X6
External IDsOMIM:612659;MGI:2445208;HomoloGene:18318;GeneCards:RFX6;OMA:RFX6 - orthologs
Gene location (Human)
Chromosome 6 (human)
Chr.Chromosome 6 (human)[1]
Chromosome 6 (human)
Genomic location for RFX6
Genomic location for RFX6
Band6q22.1Start116,877,212bp[1]
End116,932,161bp[1]
Gene location (Mouse)
Chromosome 10 (mouse)
Chr.Chromosome 10 (mouse)[2]
Chromosome 10 (mouse)
Genomic location for RFX6
Genomic location for RFX6
Band10|10 B3Start51,553,852bp[2]
End51,606,528bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • islet of Langerhans

  • testicle

  • gonad

  • duodenum

  • rectum

  • body of pancreas

  • jejunal mucosa

  • pylorus

  • body of stomach

  • mucosa of sigmoid colon
Top expressed in
  • islet of Langerhans

  • embryo

  • embryo

  • mesenchyme

  • ear

  • endoderm

  • inner ear

  • ectoderm

  • intestine

  • otic vesicle
More reference expression data
BioGPS
n/a
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo /QuickGO
Orthologs
SpeciesHumanMouse
Entrez

222546

320995

Ensembl

ENSG00000185002

ENSMUSG00000019900

UniProt

Q8HWS3

Q8C7R7

RefSeq (mRNA)

NM_173560

NM_001159389
NM_177306

RefSeq (protein)

NP_775831

NP_001152861
NP_796280

Location (UCSC)Chr 6: 116.88 – 116.93 MbChr 10: 51.55 – 51.61 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Regulatory factor X, 6 also known asDNA-binding protein RFX6 is aprotein that in humans is encoded by theRFX6gene.[5]

Function

[edit]

The nuclear protein encoded by this gene is a member of theregulatory factor X (RFX) family oftranscription factors. Studies in mice suggest that this gene is specifically required for the differentiation ofislet cells for the production ofinsulin, but not for the differentiation ofpancreatic polypeptide-producing cells. It regulates the transcription factors involved inbeta-cell maturation and function, thus, restricting the expression of the beta-cell differentiation and specification genes.

Clinical significance

[edit]

Mutations in this gene are associated withMitchell-Riley syndrome, which is characterized by neonatal diabetes with pancreatichypoplasia, duodenal and jejunalatresia, and gall bladder agenesis.[5]

References

[edit]
  1. ^abcGRCh38: Ensembl release 89: ENSG00000185002Ensembl, May 2017
  2. ^abcGRCm38: Ensembl release 89: ENSMUSG00000019900Ensembl, May 2017
  3. ^"Human PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^"Mouse PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ab"Entrez Gene: Regulatory factor X, 6". Retrieved2012-02-10.

Further reading

[edit]
(1) Basic domains
(1.1) Basicleucine zipper (bZIP)
(1.2) Basic helix-loop-helix (bHLH)
Group A
Group B
Group C
bHLH-PAS
Group D
Group E
Group F
bHLH-COE
(1.3)bHLH-ZIP
(1.4) NF-1
(1.5) RF-X
(1.6) Basic helix-span-helix (bHSH)
(2)Zinc finger DNA-binding domains
(2.1)Nuclear receptor(Cys4)
subfamily 1
subfamily 2
subfamily 3
subfamily 4
subfamily 5
subfamily 6
subfamily 0
(2.2) Other Cys4
(2.3) Cys2His2
(2.4) Cys6
(2.5) Alternating composition
(2.6) WRKY
(3.1)Homeodomain
Antennapedia
ANTP class
protoHOX
Hox-like
metaHOX
NK-like
other
(3.2) Paired box
(3.3)Fork head /winged helix
(3.4)Heat shock factors
(3.5) Tryptophan clusters
(3.6) TEA domain
  • transcriptional enhancer factor
(4)β-Scaffold factors with minor groove contacts
(4.1)Rel homology region
(4.2)STAT
(4.3) p53-like
(4.4)MADS box
(4.6)TATA-binding proteins
(4.7)High-mobility group
(4.9) Grainyhead
(4.10) Cold-shock domain
(4.11) Runt
(0) Other transcription factors
(0.2) HMGI(Y)
(0.3)Pocket domain
(0.5)AP-2/EREBP-related factors
(0.6) Miscellaneous

This article incorporates text from theUnited States National Library of Medicine, which is in thepublic domain.

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