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Plasmodiophore

From Wikipedia, the free encyclopedia
(Redirected fromPlasmodiophorid)
Group of fungi-like protists

Plasmodiophores
"Plasmodiophoraceae" 1960 illustration.
Scientific classificationEdit this classification
Domain:Eukaryota
Clade:Sar
Clade:Rhizaria
Phylum:Endomyxa
Class:Phytomyxea
Order:Plasmodiophorida
Cook, 1928
Family:Plasmodiophoridae
Zopf, 1884
Type genus
Plasmodiophora
M. Woronin, 1877
Genera
Synonyms
  • PlasmodiophoromycotaWhittaker, 1969
  • PlasmodiophoromycetesK. Cejp, 1957
  • PlasmodiophoralesEngl., 1892
  • PlasmodiophoralesF.L. Stevens, 1913
  • WoroninalesA.A. Jaczewski & P.A. Jaczewski, 1931
  • PlasmodiophoraceaeZopf ex Berl., 1888
  • WoroninaceaeM. von Minden, 1911

Theplasmodiophores[1] (also known asplasmophorids[2] orplasmodiophorids[3]) are a group ofobligateendoparasiticprotists belonging to the subphylumEndomyxa inCercozoa.[4] Taxonomically, they are united under a single familyPlasmodiophoridae, orderPlasmodiophorida, sister to thephagomyxids.[5]

Ecology and pathology

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Plasmodiophores are pathogenic for a wide range of organisms, but mainlygreen plants. The more commonly recognized are agents of plant diseases such asclubroot,powdery scab andcrook root of watercress,[6] or vectors forviruses that infectbeets,peanut,monocots andpotatoes, such as thepotato mop-top virus or thebeet necrotic yellow vein virus.[7][8]

Taxonomy

[edit]

History

[edit]

The plasmodiophores have historically been regarded asFungi. The first description of plasmodiophores as a taxonomic group was in 1885 byZopf, who united two generaPlasmodiophora andTetramyxa in a common family “Plasmodiophoreæ”, inside the group “Monadineæ”, as part of the divisionMyxomycetes. The family was renamed “Plasmodiophoraceae” in 1888 byBerlese.[9] In 1892,Engler placed the family in its own class “Plasmodiophorales”, later renamed “Plasmodiophoromycetes” to fitnomenclature standards.[10]

In 1969Whittaker, in hisfive-kingdom system, elevated the group to a separate phylum “Plasmodiophoromycota”, acknowledging them asprotists instead of fungi.[1]

In 1993Cavalier-Smith included the plasmodiophores and their sister groupPhagomyxida in their current class,Phytomyxea, as part of apolyphyletic phylum called Opalozoa, which at the time contained a diverse assemblage of unrelated zooflagellates,opalines andproteomyxids.[11] Eventually this phylum was discarded, and the nameOpalozoa was modified to label a group inside the phylumBigyra containing theopalines,bicosoecids and related organisms.[12]

Finally, afterphylogenetic analyses, in 2002Cavalier-Smith placed allPhytomyxea, including plasmodiophores, in the subphylumEndomyxa, inside therhizarian phylumCercozoa.[13][14]

Classification

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The number of genera varies between sources. There are three accepted genera in the group according to theWoRMS register:Plasmodiophora,Spongospora andTetramyxa.[15] Below is a complete list with genera that are not included in the register but appear in relevant sources:[3][16][17]

These genera were once considered plasmodiophores[20] until they were excluded:[17]

References

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  1. ^abWhittaker RH (10 January 1969). "New concepts of kingdoms or organisms. Evolutionary relations are better represented by new classifications than by the traditional two kingdoms".Science.163 (3863):150–60.doi:10.1126/science.163.3863.150.PMID 5762760.
  2. ^Stjelja S, Fogelqvist J, Tellgren-Roth C, et al. (2019)."The architecture of the Plasmodiophora brassicae nuclear and mitochondrial genomes".Sci Rep.9 (15753): 15753.doi:10.1038/s41598-019-52274-7.PMC 6823432.PMID 31673019.
  3. ^abNeuhauser S, Kirchmair M, Bulman S, et al. (23 February 2014)."Cross-kingdom host shifts of phytomyxid parasites".BMC Evol Biol.14 (33): 33.doi:10.1186/1471-2148-14-33.PMC 4016497.PMID 24559266.
  4. ^Irwin, Nicholas A.T.; Tikhonenkov, Denis V.; Hehenberger, Elisabeth; Mylnikov, Alexander P.; Burki, Fabien; Keeling, Patrick J. (2019-01-01). "Phylogenomics supports the monophyly of the Cercozoa".Molecular Phylogenetics and Evolution.130:416–423.doi:10.1016/j.ympev.2018.09.004.ISSN 1055-7903.PMID 30318266.S2CID 52982396.
  5. ^Cavalier-Smith, Thomas; Chao, Ema E.; Lewis, Rhodri (April 2018)."Multigene phylogeny and cell evolution of chromist infrakingdom Rhizaria: contrasting cell organisation of sister phyla Cercozoa and Retaria".Protoplasma.255 (5):1517–1574.doi:10.1007/s00709-018-1241-1.PMC 6133090.PMID 29666938.
  6. ^Braselton JP (2001). "Plasmodiophoromycota". In McLaughlin DJ, McLaughlin EG, Lemke PA (eds.).The Mycota. Vol. VII: Systematics and Evolution Part A. Springer, Berlin, Heidelberg. pp. 81–91.doi:10.1007/978-3-662-10376-0_4.ISBN 978-3-662-10376-0.
  7. ^Schwelm A, Badstöber J, Bulman S, Desoignies N, Etemadi M, Falloon RE, Gachon CMM, Legreve A, Lukeš J, Merz U, Nenarokova A, Strittmatter M, Sullivan BK, Neuhauser S (April 2018)."Not in your usual Top 10: protists that infect plants and algae".Mol Plant Pathol.19 (4):1029–1044.doi:10.1111/mpp.12580.PMC 5772912.PMID 29024322.
  8. ^Neuhauser, Sigrid; Kirchmair, Martin; Gleason, Frank H. (28 April 2011)."Ecological roles of the parasitic phytomyxids (plasmodiophorids) in marine ecosystems – a review".Marine and Freshwater Research.62 (4):365–371.doi:10.1071/MF10282.PMC 3272469.PMID 22319023.
  9. ^Saccardo PA, Traverso GB, Trotter A (1882).Sylloge fungorum omnium hucusque cognitorum. Vol. 1. p. 323.doi:10.5962/bhl.title.5371.LCCN agr12002244.OCLC 2472326.
  10. ^Engler A (1903).Syllabus der Pflanzenfamilien : eine Übersicht über das gesamte Pflanzensystem mit Berücksichtigung der Medicinal- und Nutzpflanzen nebst einer Übersicht über die Florenreiche und Florengebiete der Erde zum Gebrauch bei Vorlesungen und Studien über specielle und medicinisch-pharmaceutische Botanik (3rd ed.). Berlin: Borntraeger.doi:10.5962/bhl.title.22956.
  11. ^Cavalier-Smith T (September 1993). "The Protozoan Phylum Opalozoa".Eukaryotic Microbiology.40 (5):609–615.doi:10.1111/j.1550-7408.1993.tb06117.x.S2CID 84129692.
  12. ^Cavalier-Smith, Thomas; Scoble, Josephine Margaret (2012)."Phylogeny of Heterokonta:Incisomonas marina, a uniciliate gliding opalozoan related toSolenicola (Nanomonadea), and evidence that Actinophryida evolved from raphidophytes".European Journal of Protistology.49 (3):328–353.doi:10.1016/j.ejop.2012.09.002.PMID 23219323.
  13. ^Cavalier-Smith T (1 March 2002). "The phagotrophic origin of eukaryotes and phylogenetic classification of Protozoa".International Journal of Systematic and Evolutionary Microbiology.52 (2):297–354.doi:10.1099/00207713-52-2-297.PMID 11931142.
  14. ^Cavalier-Smith E, Chao EE (2003)."Phylogeny and Classification of Phylum Cercozoa (Protozoa)".Protist.154 (3–4):341–358.doi:10.1078/143446103322454112.ISSN 1434-4610.PMID 14658494.
  15. ^"Plasmodiophoridae".WoRMS.World Register of Marine Species. Retrieved19 October 2022.
  16. ^Sparrow FK (1960).Aquatic Phycomycetes. University of Michigan studies, Scientific series, v. 15. Ann Arbor, University of Michigan Press.doi:10.5962/bhl.title.5685.LCCN 59011269.OCLC 1362167.
  17. ^abDick, Michael W. (2001).Straminipilous Fungi: Systematics of the Peronosporomycetes Including Accounts of the Marine Straminipilous Protists, the Plasmodiophorids and Similar Organisms (1 ed.). Springer Dordrecht.doi:10.1007/978-94-015-9733-3.ISBN 978-94-015-9733-3.S2CID 28755980.
  18. ^abcHittorf M, Letsch-Praxmarer S, Windegger A, Bass D, Kirchmair M, Neuhauser S (2020-11-08)."Revised Taxonomy and Expanded Biodiversity of the Phytomyxea (Rhizaria, Endomyxa)".J Eukaryot Microbiol.67 (6):648–659.doi:10.1111/jeu.12817.PMC 7756720.PMID 32654223.{{cite journal}}: CS1 maint: multiple names: authors list (link)
  19. ^Neuhauser, Sigrid; Kirchmair, Martin (18 August 2011)."Sorosphaerula nom. n. for the Plasmodiophorid Genus Sorosphaera J. Schröter 1886 (Rhizaria: Endomyxa: Phytomyxea: Plasmodiophorida)".Journal of Eukaryotic Microbiology.58 (5):469–470.doi:10.1111/j.1550-7408.2011.00571.x.PMC 3245851.PMID 21851471.
  20. ^"Plasmodiophoraceae".www.mycobank.org.
  21. ^Juel."Pyrrhosorus".WoRMS.World Register of Marine Species.
  22. ^Wijayawardene, N.N.; Hyde, K.D.; Dai, D.Q.; Sánchez-García, M.; Goto, B.T.; Saxena, R.K.; et al. (2022)."Outline of Fungi and fungus-like taxa – 2021".Mycosphere.13 (1):53–453.doi:10.5943/mycosphere/13/1/2.hdl:10481/76378.S2CID 249054641.
Plasmodiophoridae
Plasmodiophorida
Plasmodiophoraceae
Plasmodiophorales
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