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Picoeukaryote

From Wikipedia, the free encyclopedia
Picoplanktonic eukaryotic organisms 3.0 μm or less in size
Photosyntheticpicoplankton off theMarquesas Islands observed byepifluorescence microscopy (blue exciting light). Orange fluorescing dots correspond toSynechococcuscyanobacteria, red fluorescing dots to picoeukaryotes.

Picoeukaryotes arepicoplanktoniceukaryotic organisms 3.0 μm or less in size. They are distributed throughout the world'smarine andfreshwaterecosystems and constitute a significant contribution toautotrophiccommunities. Though theSI prefixpico- might imply an organism smaller thanatomic size, the term was likely used to avoid confusion with existingsize classifications ofplankton.

Characteristics

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Plankton
Phytoplankton

Cell structure

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Picoeukaryotes can be eitherautotrophic andheterotrophic, and usually contain a minimal number oforganelles. For example,Ostreococcus tauri, an autotrophic picoeukaryote belonging to the classMamiellophyceae, contains only thenucleus, onemitochondrion and onechloroplast, tightly packed within acell membrane. Members of a heterotrophic class, theBicosoecida, similarly contain only two mitochondria, one foodvacuole and a nucleus.[1]

Distributions

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These organisms are found throughout the water columns. Autotrophic picoeukaryotes are restricted to the upper 100–200 m (the layer that receives light) and are often characterized by a sharp cell maximum near theDeep Chlorophyll Maximum Layer (DCML)[2] and decrease significantly below.[3] Heterotrophic groups are found at greater depths and for example, in thePacific Ocean, they have been found in the vicinity ofhydrothermal vents at depths up to 2000–2550 m. Some heterotrophic lineages are found, unstratified, at all depths from the surface down to 3000 m.[1] They show high phylogenetic diversity[4][5] and high variability in global cell concentrations, ranging from 107 to 105liter−1.[3]

Diversity

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Autotrophic picoeukaryotes commonly found in nature are members of groups such as thePrasinophyceae[6] (a kind ofgreen algae) and theHaptophyceae.[4][7] Despite their small size, these organisms have been found to contribute >10% of the total global aquatic netprimary productivity.[8] Although much less abundant than cyanobacterialphotosynthetic picoplankton, they have been shown to be as important in terms of biomass and primary production thanpicocyanobacteria.[9] In more oligotrophic environments, such asStation ALOHA, researchers believe that approximately 80% of thechlorophyll αbiomass is due to cells in thepico-size range.[2] and picoeukaryotes are now known to make up a large fraction of the biomass and productivity in this size fraction in open ocean environments[10] and even in exported carbon in the North Atlantic Bloom.[11]Analysis ofrDNA sequences indicate that heterotrophic oceanic picoeukaryotes belong to lineages such as theAlveolata,stramenopiles,choanoflagellates, andAcantharea.[5] In these lineages, many groups do not have cultured representatives yet. Grazing experiments have demonstrated that novel stramenopile picoeukaryotes are bacterivorous.[4]

Ecology

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Since the size of these organisms determines how they interact with their environment, it is no surprise that they are not known to form significant sinking organic aggregates.[12] Their contribution tocarbon cycling is difficult to assess because they are difficult to separate by techniques such as filtration.[13] Recentfluorescent in situ hybridization (FISH) experiments have shown that picoeukaryotes are fairly abundant in thedeep sea.[1] Increased resolution with the development of better FISH techniques indicates that study and detection should become easier.[14] Additionally, qPCR has been a valuable approach for delineating and quantifying the different species, e.g. oceanic and coastalBathycoccus[15] andOstreococcus species.[16] Research has also shown that picoeukaryotes have a strong correlation with chlorophyll concentrations in both meso-autotrophic reservoirs and hypereutrophic reservoirs.[17] Moreover, nitrogen enrichment experiments suggest that picoeukaryotes have an advantage over larger cells when it comes to acquiring nutrients because of their large surface area per unit volume. They have exhibited more effectiveness in the uptake of photons and nutrient from low-resource environments.[8]

Biological characteristics

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Photosynthetic picoeukaryotes, much like otherplanktonic species in the ocean photic zone, are exposed to light variations during the diel cycle and due to vertical displacement in the mixed layer of the water column. They have specialized biological reactions to help them deal with excessive densities of light, such as theXanthophyll cycle.[18] However, there are also many types of non-photosynthetic picoeukaryotes that extend into the deep ocean and do not have these biochemical pathways.[19]

See also

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Notes

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  1. ^abcMoreira, D.; P. Lopez-Garcia (2002). "The molecular ecology of microbial eukaryotes unveils a hidden world".Trends in Microbiology.10 (1):31–38.doi:10.1016/S0966-842X(01)02257-0.PMID 11755083.
  2. ^abCampbell, Lisa and Daniel Vaulot.Photosynthetic picoplankton community structure in the subtropical north pacific ocean near Hawaii (station ALOHA).Archived 2011-05-20 at theWayback Machine Deep-Sea Research Part I, Vol. 40, No. 10, pp. 2043-2060 (1993). Accessed April 30, 2008.
  3. ^abHall, J.A. and W.F. Vincent.Vertical and horizontal structure in the picoplankton communities of a coastal upwelling system. Marine Biology 106, 465-471 (1990). Accessed April 30, 2008.
  4. ^abcMassana, R. et al.Unveiling the Organisms behind Novel Eukaryotic Ribosomal DNA Sequences from the Ocean. Applied and Environmental Microbiology, 4554-4558 (2002). Accessed April 30, 2008
  5. ^abMoon-van der Staay, S. et al.Oceanic 18S rDNA sequences from picoplankton reveal unsuspected eukaryotic diversity. Nature 409, 607-610 (2001). Accessed April 30, 2008.
  6. ^Worden AZ (2006)."Picoeukaryote diversity in coastal waters of the Pacific Ocean".Aquatic Microbial Ecology.43 (2):165–175.doi:10.3354/ame043165.
  7. ^Cuvelier ML, et al. (2010)."Targeted metagenomics and ecology of globally important uncultured eukaryotic phytoplankton".Proc Natl Acad Sci U S A.107 (33):14679–84.Bibcode:2010PNAS..10714679C.doi:10.1073/pnas.1001665107.PMC 2930470.PMID 20668244.
  8. ^abFouilland, E. et al.Productivity and growth of a natural population of the smallest free-living eukaryote under nitrogen deficiency and sufficiency. Microbial Ecology 48, 103–110(2004). Accessed April 30, 2008.
  9. ^Worden AZ, Nolan JK, Palenik B (2004). "Assessing the dynamics and ecology of marine picophytoplankton: The importance of the eukaryotic component".Limnology and Oceanography.49 (1):168–179.Bibcode:2004LimOc..49..168W.CiteSeerX 10.1.1.527.5206.doi:10.4319/lo.2004.49.1.0168.S2CID 86571162.
  10. ^Cuvelier ML, et al. (2010)."Targeted metagenomics and ecology of globally important uncultured eukaryotic phytoplankton".Proc Natl Acad Sci U S A.107 (33):14679–84.Bibcode:2010PNAS..10714679C.doi:10.1073/pnas.1001665107.PMC 2930470.PMID 20668244.
  11. ^Omand, M. M.; d'Asaro, E. A.; Lee, C. M.; Perry, M. J.; Briggs, N.; Cetini, I.; Mahadevan, A. (2015)."Eddy-driven subduction exports particulate organic carbon from the spring bloom".Science.348 (6231):222–225.Bibcode:2015Sci...348..222O.doi:10.1126/science.1260062.PMID 25814062.
  12. ^Waite, Anya M.; Safi, Karl A.; Hall, Julie A.; Nodder, Scott D. (2000)."Mass Sedimentation of Picoplankton Embedded in Organic Aggregates".Limnology and Oceanography.45 (1):87–97.Bibcode:2000LimOc..45...87W.doi:10.4319/lo.2000.45.1.0087.JSTOR 2670791.
  13. ^Worden, A. Z.et al. (2004). Assessing the dynamics and ecology of marine picophytoplankton: The importance of the eukaryotic component.Limnology and Oceanography49: 168-79.
  14. ^Biegala, I.C. et al.Quantitative Assessment of Picoeukaryotes in the Natural Environment by Using Taxon-Specific Oligonucleotide Probes in Association with Tyramide Signal Amplification-Fluorescence In Situ Hybridization and Flow Cytometry. Applied and Environmental Microbiology, 5519-5529 (2003). Accessed April 30, 2008.
  15. ^Limardo, Alexander J.; Sudek, Sebastian; Choi, Chang Jae; Poirier, Camille; Rii, Yoshimi M.; Blum, Marguerite; Roth, Robyn; Goodenough, Ursula; Church, Matthew J.; Worden, Alexandra Z. (2017)."Quantitative biogeography of picoprasinophytes establishes ecotype distributions and significant contributions to marine phytoplankton".Environmental Microbiology.19 (8):3219–3234.Bibcode:2017EnvMi..19.3219L.doi:10.1111/1462-2920.13812.PMID 28585420.
  16. ^Demir-Hilton, Elif; Sudek, Sebastian; Cuvelier, Marie L.; Gentemann, Chelle L.; Zehr, Jonathan P.; Worden, Alexandra Z. (2011)."Global distribution patterns of distinct clades of the photosynthetic picoeukaryote Ostreococcus".The ISME Journal.5 (7):1095–1107.Bibcode:2011ISMEJ...5.1095D.doi:10.1038/ismej.2010.209.PMC 3146286.PMID 21289652.
  17. ^Wang, Baoli et al.The distributions of autumn picoplankton in relation to environmental factors in the reservoirs along the Wujiang River in Guizhou Province, SW China. Hydrobiologia 598:35–45 (2008). Accessed April 30, 2008.
  18. ^Dimier, Celine. et al.Photophysiological properties of the marine picoeukaryote Picochlorum RCC 237 (Trebouxiophyceae, Chlorophyta). J. Phycol. 43, 275–283 (2007). Accessed April 30, 2008.
  19. ^Not, Fabrice; Gausling, Rudolf; Azam, Farooq; Heidelberg, John F.; Worden, Alexandra Z. (2007). "Vertical distribution of picoeukaryotic diversity in the Sargasso Sea".Environmental Microbiology.9 (5):1233–1252.Bibcode:2007EnvMi...9.1233N.doi:10.1111/j.1462-2920.2007.01247.x.PMID 17472637.

External links

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  • MicrobeWiki A site on a biology Wiki run by Kenyon College
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