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Penam

From Wikipedia, the free encyclopedia
Penam
Names
IUPAC name
(5R)-4-thia-1-azabicyclo[3.2.0]heptan-7-one
Other names
1-Aza-7-oxo-4-thiabicyclo[3.2.0]heptane
Identifiers
3D model (JSmol)
4374479
ChEBI
ChemSpider
  • InChI=1S/C5H7NOS/c7-4-3-5-6(4)1-2-8-5/h5H,1-3H2/t5-/m1/s1
    Key: WSHJJCPTKWSMRR-RXMQYKEDSA-N
  • InChI=1S/C5H7NOS/c7-4-3-5-6(4)1-2-8-5/h5H,1-3H2/t5-/m1/s1
    Key: WSHJJCPTKWSMRR-RXMQYKEDSA-N
  • C1CSC2N1C(=O)C2
Properties
C5H7NOS
Molar mass129.18 g·mol−1
Related compounds
Related compounds
clavam
Except where otherwise noted, data are given for materials in theirstandard state (at 25 °C [77 °F], 100 kPa).
Chemical compound
Benzylpenicillin, an example of a penam
Not to be confused withpenem.

Penams are the primary skeleton structures that define thepenicillin subclass of the broaderβ-lactam family ofantibiotics and related compounds. They arebicyclic ring systems containing a β-lactammoiety fused with a five-memberthiazolidine ring.[1] Due toring strain and limitations onamideresonance, the structure is unstable and highly susceptible tocatalytic cleavage at theamide bond.[2]Benzylpenicillin (penicillin G) is the natural product parent that contains the penam structure.

Structure

[edit]

Penams have inflexible structures. The structure is locked in a puckered (i.e. bent) shape due to the pyramidal geometry of the bridgehead nitrogen. The pyramidalization (χ = 54°) and twist of the C-N bond (τ = 18°) is caused by the strain from the lone pair's exclusion from planarity with the cyclic rings and electrostatic repulsion effects. As a result, the distorted C-N bond causes misalignment the orbitals of the carbonyl carbon and the nitrogen lone pair that allow for resonance overlap. The amide C-N bond length is 1.406 Å and displays greater single bond character than in noncyclic tertiary amides. The C-O bond length is 1.205 Å which is shorter than C-O bonds in noncyclic tertiary amides.[3]

Penams are strained due to theangle strain on the four-member β-lactam ring, whose internal bond angles are 90º.[4][3] Consequently, penams are susceptible to acid- and base-catalyzedhydrolysis.[1][4]

References

[edit]
  1. ^abNovak, Igor; Chua, Pei Juan (2006-09-01). "Computational Study of Pharmacophores: β-Lactams".The Journal of Physical Chemistry A.110 (35):10521–10524.Bibcode:2006JPCA..11010521N.doi:10.1021/jp063162b.ISSN 1089-5639.PMID 16942059.
  2. ^Patrick, Graham (2017-03-23), "5. Pharmaceuticals and medicinal chemistry",Organic Chemistry: A Very Short Introduction, Oxford University Press, pp. 71–89,doi:10.1093/actrade/9780198759775.003.0005,ISBN 978-0-19-875977-5
  3. ^abGlover, Stephen A.; Rosser, Adam A. (2012-06-14). "Reliable Determination of Amidicity in Acyclic Amides and Lactams".The Journal of Organic Chemistry.77 (13):5492–5502.doi:10.1021/jo300347k.ISSN 0022-3263.PMID 22646836.
  4. ^abHu, Feng; Lalancette, Roger; Szostak, Michal (2016-03-08). "Structural Characterization of N-Alkylated Twisted Amides: Consequences for Amide Bond Resonance and N−C Cleavage".Angewandte Chemie International Edition.55 (16):5062–5066.doi:10.1002/anie.201600919.ISSN 1433-7851.PMID 26953809.
β-lactams
(inhibit synthesis
of peptidoglycan
layer of bacterial
cell wall by binding
to and inhibiting
PBPs, a group of
D-alanyl-D-alanine
transpeptidases
)
Penicillins (Penams)
Narrow
spectrum
β-lactamase sensitive
(1st generation)
β-lactamase resistant
(2nd generation)
Extended
spectrum
Aminopenicillins (3rd generation)
Carboxypenicillins (4th generation)
Ureidopenicillins (4th generation)
Other
Carbapenems /Penems
Cephems
Cephalosporins
Cephamycins
Carbacephems
1st generation
2nd generation
3rd generation
4th generation
5th generation
Siderophore
Veterinary
Monobactams
β-lactamase inhibitors
Combinations
Polypeptides
Lipopeptides
Other
  • Inhibits PG elongation and crosslinking:Ramoplanin§
Intracellular
Other
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