Phylum of archaea
"Parvarchaeota" is aphylum ofarchaea belonging to theNanobdellati kingdom . They have been discovered inacid mine drainage waters and later inmarine sediments . The cells of these organisms are extremely small consistent with smallgenomes .Metagenomic techniques allow obtaining genomic sequences from non-cultured organisms, which were applied to determine this phylum.[ 1]
Thetype species is "Candidatus Parvarchaeum acidiphilumcells , around 400-500 nm, and reduced genomes made up of about 1000genes . A similar-sized archaea that has been found in the same acidic environments is "Ca. MicroarcheumMicrarchaeota .[ 1] [ 2]
According to the phylogenetic trees "Parvarchaeota" may be a sister group ofThermoplasmata withinEuryarchaeota [ 3] [ 1] [ 3] [ 4]
The currently accepted taxonomy is based on theList of Prokaryotic names with Standing in Nomenclature (LPSN)[ 5] National Center for Biotechnology Information (NCBI).[ 6]
Class "Parvarchaeia "Order "Tiddalikarchaeales" Vazquez-Campos et al. 2021 [ 7] Family "Tiddalikarchaeaceae"Vazquez-Campos et al. 2021 [ 7] Genus "Candidatus Tiddalikarchaeum"Vazquez-Campos et al. 2021 [ 7] "Ca. T. anstoanum"Vazquez-Campos et al. 2021 [ 7] Order "Jingweiarchaeales" Rao et al. 2023 Family "Jingweiarchaeaceae"Rao et al. 2023 Genus "Candidatus Jingweiarchaeum"Rao et al. 2023 "Ca. J. tengchongense"Rao et al. 2023 Order JAPDLS01 Family "Haiyanarchaeaceae"Rao et al. 2023 Genus "Candidatus Haiyanarchaeum"Rao et al. 2023 "Ca. H. thermophilum"Rao et al. 2023 Order "Parvarchaeales" Rinke et al. 2020 [ 8] Family "Parvarchaeaceae"Rinke et al. 2020 [ 8] Luo et al. 2020 [ 9] Genus "Candidatus Rehaiarchaeum"Rao et al. 2023 "Ca. R. fermentans"Rao et al. 2023 Genus "Candidatus Acidifodinimicrobium"Luo et al. 2020 [ 9] "Ca. A. mancum"Luo et al. 2020 [ 9] Genus "Candidatus Parvarchaeum"Baker et al. 2010 [ 10] "Ca. P. acidiphilum"Baker et al. 2010 [ 10] "Ca. P. paracidiphilum"corrig. Baker et al. 2010 [ 10] "Ca. P. tengchongense"Rao et al. 2023 Phylogeny of "Parvarchaeota".[ 11] [ 12] [ 13]
"Parvarchaeia" "JAPDLS01" "Parvarchaeales"
^a b c Rinke C, Schwientek P, Sczyrba A, Ivanova NN, Anderson IJ, Cheng JF, Darling A, Malfatti S, Swan BK, Gies EA, Dodsworth JA, Hedlund BP, Tsiamis G, Sievert SM, Liu WT, Eisen JA, Hallam SJ, Kyrpides NC, Stepanauskas R, Rubin EM, Hugenholtz P, Woyke T (July 25, 2013)."Insights into the phylogeny and coding potential of microbial dark matter" .Nature . 499, 431–437 (2013) (7459):431– 437.Bibcode :2013Natur.499..431R .doi :10.1038/nature12352 hdl :10453/27467 PMID 23851394 . {{cite journal }}: CS1 maint: multiple names: authors list (link )^ Brett J. Baker, Gregory J. Dick. Omic,Approaches in Microbial Ecology:Charting the Unknown Analysis of wholecommunity sequence data is unveiling the diversity and function of specific microbial groups within uncultured phyla and across entire microbial ecosystems . Academia.edu. ^a b Petitjean, C.; Deschamps, P.; López-García, P.; Moreira, D. (2014)."Rooting the domain Archaea by phylogenomic analysis supports the foundation of the new kingdom Proteoarchaeota" .Genome Biol. Evol .7 (1):191– 204.doi :10.1093/gbe/evu274 .PMC 4316627 PMID 25527841 . ^ Cavalier-Smith, Thomas; Chao, Ema E-Yung (2020)."Multidomain ribosomal protein trees and the planctobacterial origin of neomura (Eukaryotes, archaebacteria)" .Protoplasma .257 (3):621– 753.doi :10.1007/s00709-019-01442-7 .PMC 7203096 PMID 31900730 . ^ J.P. Euzéby."Parvarchaeota" .List of Prokaryotic names with Standing in Nomenclature (LPSN). Retrieved2021-06-27 . ^ Sayers; et al."Parvarchaeota" .National Center for Biotechnology Information (NCBI) taxonomy database. Retrieved2021-03-20 . ^a b c d Vázquez-Campos, Xabier; Kinsela, Andrew S.; Bligh, Mark W.; Payne, Timothy E.; Wilkins, Marc R.; Waite, T. David (2021)."Genomic Insights Into the Archaea Inhabiting an Australian Radioactive Legacy Site" .Frontiers in Microbiology .12 732575.doi :10.3389/fmicb.2021.732575 ISSN 1664-302X .PMC 8561730 PMID 34737728 . ^a b Rinke, Christian; Chuvochina, Maria; Mussig, Aaron J.; Chaumeil, Pierre-Alain; Davin, Adrian A.; Waite, David W.; Whitman, William B.; Parks, Donovan H.; Hugenholtz, Philip (2021-02-17)."Resolving widespread incomplete and uneven archaeal classifications based on a rank-normalized genome-based taxonomy" .Nature Microbiology .6 (7):946– 959.bioRxiv 10.1101/2020.03.01.972265 doi :10.1038/s41564-021-00918-8 .PMID 34155373 .S2CID 231984712 . ^a b c Luo, Zhen-Hao; Li, Qi; Lai, Yan; Chen, Hao; Liao, Bin; Huang, Li-nan (2020)."Diversity and Genomic Characterization of a Novel Parvarchaeota Family in Acid Mine Drainage Sediments" .Frontiers in Microbiology .11 612257.doi :10.3389/fmicb.2020.612257 ISSN 1664-302X .PMC 7779479 PMID 33408709 . ^a b c Baker, Brett J.; Comolli, Luis R.; Dick, Gregory J.; Hauser, Loren J.; Hyatt, Doug; Dill, Brian D.; Land, Miriam L.; VerBerkmoes, Nathan C.; Hettich, Robert L.; Banfield, Jillian F. (2010-05-11)."Enigmatic, ultrasmall, uncultivated Archaea" .Proceedings of the National Academy of Sciences .107 (19):8806– 8811.Bibcode :2010PNAS..107.8806B .doi :10.1073/pnas.0914470107 ISSN 0027-8424 .PMC 2889320 PMID 20421484 . ^ "GTDB release 09-RS220" .Genome Taxonomy Database . Retrieved10 May 2024 .^ "ar53_r220.sp_label" .Genome Taxonomy Database . Retrieved10 May 2024 .^ "Taxon History" .Genome Taxonomy Database . Retrieved10 May 2024 .
Nanobdellati
"Iainarchaeota " "Iainarchaeia""Forterreales" "Iainarchaeales" "Micrarchaeota " "Micrarchaeia""Anstonellales" "Burarchaeales" "Fermentimicrarchaeales" "Gugararchaeales" "Micrarchaeales" "Norongarragalinales" "Nanohalarchaeota " "Nanohalarchaeia""Nanohalarchaeales" "Nanohydrothermales" "Nucleotidisoterales" "Nanohalobiia" Nanobdellota Nanobdellia"Haiyanarchaeaceae" "Jingweiarchaeales" Nanobdellales "Pacearchaeales" "Parvarchaeales" "Tiddalikarchaeales" "Woesearchaeales"
Promethearchaeati
