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POU3F2

From Wikipedia, the free encyclopedia
Protein-coding gene in the species Homo sapiens
POU3F2
Identifiers
AliasesPOU3F2, BRN2, N-Oct3, OCT7, OTF-7, OTF7, POUF3, brn-2, oct-7, POU class 3 homeobox 2
External IDsOMIM:600494;MGI:101895;HomoloGene:4095;GeneCards:POU3F2;OMA:POU3F2 - orthologs
Gene location (Human)
Chromosome 6 (human)
Chr.Chromosome 6 (human)[1]
Chromosome 6 (human)
Genomic location for POU3F2
Genomic location for POU3F2
Band6q16.1Start98,834,574bp[1]
End98,839,458bp[1]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • ganglionic eminence

  • ventricular zone

  • buccal mucosa cell

  • pars reticulata

  • internal globus pallidus

  • ventral tegmental area

  • pars compacta

  • inferior ganglion of vagus nerve

  • primary visual cortex

  • superior vestibular nucleus
    n/a
More reference expression data
BioGPS
More reference expression data
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo /QuickGO
Orthologs
SpeciesHumanMouse
Entrez

5454

18992

Ensembl

ENSG00000184486

ENSMUSG00000095139

UniProt

P20265

P31360

RefSeq (mRNA)

NM_005604

NM_008899

RefSeq (protein)

NP_005595

NP_032925

Location (UCSC)Chr 6: 98.83 – 98.84 Mbn/a
PubMed search[2][3]
Wikidata
View/Edit HumanView/Edit Mouse

POU domain, class 3, transcription factor 2 is aprotein that in humans is encoded by thePOU3F2gene.[4][5]

Function

[edit]

N-Oct-3 is a protein belonging to a large family of transcription factors that bind to the octameric DNA sequence ATGCAAAT. Most of these proteins share a highly homologous region, referred to as the POU domain, which occurs in several mammalian transcription factors, including the octamer-binding proteins Oct1 (POU2F1; MIM 164175) and Oct2 (POU2F2; MIM 164176), and the pituitary protein Pit1 (PIT1; MIM 173110).

Class III POU genes are expressed predominantly in the CNS. It is likely that CNS-specific transcription factors such as these play an important role in mammalian neurogenesis by regulating their diverse patterns of gene expression.[5]

Disease linkage

[edit]

The POU3F2 protein associates with theBipolar disorder. It is involved in the neocortex development in mice, and is linked to a single nucleotide polymorphism,Rs1906252, that is associated with a cognitive phenotype: processing information speed.[6]

Chromosome 6q16.1 deletions resulting in loss of one copy of POU3F2 have been shown to cause a human syndrome of susceptibility to obesity and variable levels of developmental delay and Intellectual Disability.[7]

Interactions

[edit]

POU3F2 has been shown tointeract withPQBP1.[8]

See also

[edit]

References

[edit]
  1. ^abcGRCh38: Ensembl release 89: ENSG00000184486Ensembl, May 2017
  2. ^"Human PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  3. ^"Mouse PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^Schreiber E, Tobler A, Malipiero U, Schaffner W, Fontana A (January 1993)."cDNA cloning of human N-Oct3, a nervous-system specific POU domain transcription factor binding to the octamer DNA motif".Nucleic Acids Research.21 (2):253–8.doi:10.1093/nar/21.2.253.PMC 309100.PMID 8441633.
  5. ^ab"Entrez Gene: POU3F2 POU domain, class 3, transcription factor 2".
  6. ^Mühleisen TW, Leber M, Schulze TG, Strohmaier J, Degenhardt F, Treutlein J, et al. (2014)."Genome-wide association study reveals two new risk loci for bipolar disorder".Nature Communications.5: 3339.Bibcode:2014NatCo...5.3339M.doi:10.1038/ncomms4339.hdl:1959.4/unsworks_13067.PMID 24618891.
  7. ^Kasher PR, Schertz KE, Thomas M, Jackson A, Annunziata S, Ballesta-Martinez MJ, et al. (February 2016)."Small 6q16.1 Deletions Encompassing POU3F2 Cause Susceptibility to Obesity and Variable Developmental Delay with Intellectual Disability".American Journal of Human Genetics.98 (2):363–72.doi:10.1016/j.ajhg.2015.12.014.PMC 4746363.PMID 26833329.
  8. ^Waragai M, Lammers CH, Takeuchi S, Imafuku I, Udagawa Y, Kanazawa I, Kawabata M, Mouradian MM, Okazawa H (June 1999)."PQBP-1, a novel polyglutamine tract-binding protein, inhibits transcription activation by Brn-2 and affects cell survival".Human Molecular Genetics.8 (6):977–87.doi:10.1093/hmg/8.6.977.PMID 10332029.

Further reading

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External links

[edit]

This article incorporates text from theUnited States National Library of Medicine, which is in thepublic domain.

(1) Basic domains
(1.1) Basicleucine zipper (bZIP)
(1.2) Basic helix-loop-helix (bHLH)
Group A
Group B
Group C
bHLH-PAS
Group D
Group E
Group F
bHLH-COE
(1.3)bHLH-ZIP
(1.4) NF-1
(1.5) RF-X
(1.6) Basic helix-span-helix (bHSH)
(2)Zinc finger DNA-binding domains
(2.1)Nuclear receptor(Cys4)
subfamily 1
subfamily 2
subfamily 3
subfamily 4
subfamily 5
subfamily 6
subfamily 0
(2.2) Other Cys4
(2.3) Cys2His2
(2.4) Cys6
(2.5) Alternating composition
(2.6) WRKY
(3.1)Homeodomain
Antennapedia
ANTP class
protoHOX
Hox-like
metaHOX
NK-like
other
(3.2) Paired box
(3.3)Fork head /winged helix
(3.4)Heat shock factors
(3.5) Tryptophan clusters
(3.6) TEA domain
  • transcriptional enhancer factor
(4)β-Scaffold factors with minor groove contacts
(4.1)Rel homology region
(4.2)STAT
(4.3) p53-like
(4.4)MADS box
(4.6)TATA-binding proteins
(4.7)High-mobility group
(4.9) Grainyhead
(4.10) Cold-shock domain
(4.11) Runt
(0) Other transcription factors
(0.2) HMGI(Y)
(0.3)Pocket domain
(0.5)AP-2/EREBP-related factors
(0.6) Miscellaneous


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