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PITX3

From Wikipedia, the free encyclopedia
Protein-coding gene
PITX3
Identifiers
AliasesPITX3, ASMD, ASOD, CTPP4, CTRCT11, PTX3, paired like homeodomain 3, ASGD1
External IDsOMIM:602669;MGI:1100498;HomoloGene:3689;GeneCards:PITX3;OMA:PITX3 - orthologs
Gene location (Mouse)
Chromosome 19 (mouse)
Chr.Chromosome 19 (mouse)[1]
Chromosome 19 (mouse)
Genomic location for PITX3
Genomic location for PITX3
Band19 C3|19 38.75 cMStart46,124,124bp[1]
End46,136,765bp[1]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • gastrocnemius muscle

  • skeletal muscle tissue

  • ventricle of the heart

  • left ventricle

  • mesencephalon

  • substantia nigra

  • face

  • sensory nervous system

  • sensory organ

  • kidney
Top expressed in
  • lens

  • muscle of thigh

  • embryo

  • lip

  • female urethra

  • male urethra

  • lens placode

  • temporal muscle

  • embryo

  • internal carotid artery
More reference expression data
BioGPS
More reference expression data
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo /QuickGO
Orthologs
SpeciesHumanMouse
Entrez

5309

18742

Ensembl

n/a

ENSMUSG00000025229

UniProt

O75364

O35160

RefSeq (mRNA)

NM_005029

NM_008852

RefSeq (protein)

NP_005020

NP_032878

Location (UCSC)n/aChr 19: 46.12 – 46.14 Mb
PubMed search[2][3]
Wikidata
View/Edit HumanView/Edit Mouse

Pituitary homeobox 3 is aprotein that in humans is encoded by thePITX3gene.[4][5]

Function

[edit]

This gene encodes a member of the RIEG/PITX homeobox family, which is in the bicoid class ofhomeodomain proteins. Members of this family act astranscription factors. This protein is involved in lens formation during eye development,[5] and the specification and terminal differentiation of mesencephalic dopamine neurons in the substantia nigra compacta that are lost in Parkinson's disease.[6]

Clinical significance

[edit]

Mutations of this gene have been associated withanterior segment mesenchymal dysgenesis (ASMD) andcongenital cataracts.[5]

References

[edit]
  1. ^abcGRCm38: Ensembl release 89: ENSMUSG00000025229Ensembl, May 2017
  2. ^"Human PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  3. ^"Mouse PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^Semina EV, Ferrell RE, Mintz-Hittner HA, Bitoun P, Alward WL, Reiter RS, Funkhauser C, Daack-Hirsch S, Murray JC (June 1998). "A novel homeobox gene PITX3 is mutated in families with autosomal-dominant cataracts and ASMD".Nature Genetics.19 (2):167–70.doi:10.1038/527.PMID 9620774.S2CID 23213513.
  5. ^abc"Entrez Gene: PITX3 paired-like homeodomain transcription factor 3".
  6. ^Smidt MP, Smits SM, Bouwmeester H, Hamers FP, van der Linden AJ, Hellemons AJ, Graw J, Burbach JP (March 2004). "Early developmental failure of substantia nigra dopamine neurons in mice lacking the homeodomain gene Pitx3".Development.131 (5):1145–55.doi:10.1242/dev.01022.PMID 14973278.S2CID 20585228.

Further reading

[edit]

External links

[edit]

This article incorporates text from theUnited States National Library of Medicine, which is in thepublic domain.

PDB gallery
  • 1yz8: Solution structure of the k50 class homeodomain pitx2 bound to dna and implications for mutations that cause rieger syndrome
    1yz8: Solution structure of the k50 class homeodomain pitx2 bound to dna and implications for mutations that cause rieger syndrome
(1) Basic domains
(1.1) Basicleucine zipper (bZIP)
(1.2) Basic helix-loop-helix (bHLH)
Group A
Group B
Group C
bHLH-PAS
Group D
Group E
Group F
bHLH-COE
(1.3)bHLH-ZIP
(1.4) NF-1
(1.5) RF-X
(1.6) Basic helix-span-helix (bHSH)
(2)Zinc finger DNA-binding domains
(2.1)Nuclear receptor(Cys4)
subfamily 1
subfamily 2
subfamily 3
subfamily 4
subfamily 5
subfamily 6
subfamily 0
(2.2) Other Cys4
(2.3) Cys2His2
(2.4) Cys6
(2.5) Alternating composition
(2.6) WRKY
(3.1)Homeodomain
Antennapedia
ANTP class
protoHOX
Hox-like
metaHOX
NK-like
other
(3.2) Paired box
(3.3)Fork head /winged helix
(3.4)Heat shock factors
(3.5) Tryptophan clusters
(3.6) TEA domain
  • transcriptional enhancer factor
(4)β-Scaffold factors with minor groove contacts
(4.1)Rel homology region
(4.2)STAT
(4.3) p53-like
(4.4)MADS box
(4.6)TATA-binding proteins
(4.7)High-mobility group
(4.9) Grainyhead
(4.10) Cold-shock domain
(4.11) Runt
(0) Other transcription factors
(0.2) HMGI(Y)
(0.3)Pocket domain
(0.5)AP-2/EREBP-related factors
(0.6) Miscellaneous


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