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PHOX2A

From Wikipedia, the free encyclopedia
Protein-coding gene in humans
PHOX2A
Identifiers
AliasesPHOX2A, ARIX, CFEOM2, FEOM2, NCAM2, PMX2A, paired like homeobox 2a
External IDsOMIM:602753;MGI:106633;HomoloGene:31296;GeneCards:PHOX2A;OMA:PHOX2A - orthologs
Gene location (Human)
Chromosome 11 (human)
Chr.Chromosome 11 (human)[1]
Chromosome 11 (human)
Genomic location for PHOX2A
Genomic location for PHOX2A
Band11q13.4Start72,239,077bp[1]
End72,245,664bp[1]
Gene location (Mouse)
Chromosome 7 (mouse)
Chr.Chromosome 7 (mouse)[2]
Chromosome 7 (mouse)
Genomic location for PHOX2A
Genomic location for PHOX2A
Band7 E2|7 54.66 cMStart101,467,520bp[2]
End101,471,933bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • testicle

  • gonad

  • muscle layer of sigmoid colon

  • cecum

  • appendix

  • superior vestibular nucleus

  • gastric mucosa

  • right adrenal gland

  • transverse colon

  • muscle tissue
Top expressed in
  • superior cervical ganglion

  • external carotid artery

  • enteric nervous system

  • female urethra

  • internal carotid artery

  • adrenal gland

  • epithelium of female urethra

  • parasympathetic nervous system

  • tail of embryo

  • embryo
More reference expression data
BioGPS
More reference expression data
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo /QuickGO
Orthologs
SpeciesHumanMouse
Entrez

401

11859

Ensembl

ENSG00000165462

ENSMUSG00000007946

UniProt

O14813

Q62066

RefSeq (mRNA)

NM_005169

NM_008887

RefSeq (protein)

NP_005160

NP_032913

Location (UCSC)Chr 11: 72.24 – 72.25 MbChr 7: 101.47 – 101.47 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Paired mesoderm homeobox protein 2A is aprotein that in humans is encoded by thePHOX2Agene.[5][6][7]

Function

[edit]

The protein encoded by this gene contains a paired-like homeodomain most similar to that of the Drosophila aristaless gene product. This protein is expressed specifically in noradrenergic cell types. It regulates the expression of tyrosine hydroxylase and dopamine beta-hydroxylase, two catecholaminergic biosynthetic enzymes essential for the differentiation and maintenance of noradrenergic phenotype. Mutations in this gene have been associated with autosomal recessivecongenital fibrosis of the extraocular muscles (CFEOM2).[7]

Interactions

[edit]

PHOX2A has been shown tointeract withHAND2.[8]

See also

[edit]

PHOX2B

References

[edit]
  1. ^abcGRCh38: Ensembl release 89: ENSG00000165462Ensembl, May 2017
  2. ^abcGRCm38: Ensembl release 89: ENSMUSG00000007946Ensembl, May 2017
  3. ^"Human PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^"Mouse PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^Johnson KR, Smith L, Johnson DK, Rhodes J, Rinchik EM, Thayer M, Lewis EJ (Sep 1996). "Mapping of the ARIX homeodomain gene to mouse chromosome 7 and human chromosome 11q13".Genomics.33 (3):527–31.doi:10.1006/geno.1996.0230.PMID 8661014.
  6. ^Nakano M, Yamada K, Fain J, Sener EC, Selleck CJ, Awad AH, Zwaan J, Mullaney PB, Bosley TM, Engle EC (Nov 2001). "Homozygous mutations in ARIX(PHOX2A) result in congenital fibrosis of the extraocular muscles type 2".Nat. Genet.29 (3):315–20.doi:10.1038/ng744.PMID 11600883.S2CID 25403574.
  7. ^ab"Entrez Gene: PHOX2A paired-like (aristaless) homeobox 2a".
  8. ^Rychlik JL, Gerbasi V, Lewis EJ (Dec 2003)."The interaction between dHAND and Arix at the dopamine beta-hydroxylase promoter region is independent of direct dHAND binding to DNA".J. Biol. Chem.278 (49):49652–60.doi:10.1074/jbc.M308577200.PMID 14506227.

Further reading

[edit]

External links

[edit]

This article incorporates text from theUnited States National Library of Medicine, which is in thepublic domain.

(1) Basic domains
(1.1) Basicleucine zipper (bZIP)
(1.2) Basic helix-loop-helix (bHLH)
Group A
Group B
Group C
bHLH-PAS
Group D
Group E
Group F
bHLH-COE
(1.3)bHLH-ZIP
(1.4) NF-1
(1.5) RF-X
(1.6) Basic helix-span-helix (bHSH)
(2)Zinc finger DNA-binding domains
(2.1)Nuclear receptor(Cys4)
subfamily 1
subfamily 2
subfamily 3
subfamily 4
subfamily 5
subfamily 6
subfamily 0
(2.2) Other Cys4
(2.3) Cys2His2
(2.4) Cys6
(2.5) Alternating composition
(2.6) WRKY
(3.1)Homeodomain
Antennapedia
ANTP class
protoHOX
Hox-like
metaHOX
NK-like
other
(3.2) Paired box
(3.3)Fork head /winged helix
(3.4)Heat shock factors
(3.5) Tryptophan clusters
(3.6) TEA domain
  • transcriptional enhancer factor
(4)β-Scaffold factors with minor groove contacts
(4.1)Rel homology region
(4.2)STAT
(4.3) p53-like
(4.4)MADS box
(4.6)TATA-binding proteins
(4.7)High-mobility group
(4.9) Grainyhead
(4.10) Cold-shock domain
(4.11) Runt
(0) Other transcription factors
(0.2) HMGI(Y)
(0.3)Pocket domain
(0.5)AP-2/EREBP-related factors
(0.6) Miscellaneous


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