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PAX4

From Wikipedia, the free encyclopedia
Protein-coding gene in humans

PAX4
Identifiers
AliasesPAX4, KPD, MODY9, paired box 4
External IDsOMIM:167413;MGI:97488;HomoloGene:4515;GeneCards:PAX4;OMA:PAX4 - orthologs
Gene location (Human)
Chromosome 7 (human)
Chr.Chromosome 7 (human)[1]
Chromosome 7 (human)
Genomic location for PAX4
Genomic location for PAX4
Band7q32.1Start127,610,292bp[1]
End127,618,142bp[1]
Gene location (Mouse)
Chromosome 6 (mouse)
Chr.Chromosome 6 (mouse)[2]
Chromosome 6 (mouse)
Genomic location for PAX4
Genomic location for PAX4
Band6 A3.3|6 11.99 cMStart28,442,333bp[2]
End28,449,352bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • testicle

  • rectum

  • mucosa of transverse colon

  • duodenum

  • tibialis anterior muscle

  • deltoid muscle

  • islet of Langerhans

  • developmental structure

  • embryo

  • ganglionic eminence
Top expressed in
  • entorhinal cortex

  • CA3 field

  • perirhinal cortex

  • embryo

  • embryo

  • medulla oblongata

  • inner muscle layer

  • ureter

  • lens

  • duodenum
More reference expression data
BioGPS


More reference expression data
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo /QuickGO
Orthologs
SpeciesHumanMouse
Entrez

5078

18506

Ensembl

ENSG00000106331

ENSMUSG00000029706

UniProt

O43316
Q3KNR5

P32115

RefSeq (mRNA)

NM_006193
NM_001366110
NM_001366111

NM_001159925
NM_001159926
NM_011038

RefSeq (protein)

NP_006184
NP_001353039
NP_001353040

NP_001153397
NP_001153398
NP_035168

Location (UCSC)Chr 7: 127.61 – 127.62 MbChr 6: 28.44 – 28.45 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Paired box gene 4, also known asPAX4, is aprotein which in humans is encoded by thePAX4gene.[5][6][7]

Function

[edit]

This gene is a member of the paired box (PAX) family oftranscription factors. Members of this gene family typically contain a paired box domain, an octapeptide, and a paired-typehomeodomain. These genes play critical roles during fetal development andcancer growth. The paired box gene 4 is involved inpancreatic islet development and mouse studies have demonstrated a role for this gene in differentiation of insulin-producingbeta cells.[5]

See also

[edit]

References

[edit]
  1. ^abcGRCh38: Ensembl release 89: ENSG00000106331Ensembl, May 2017
  2. ^abcGRCm38: Ensembl release 89: ENSMUSG00000029706Ensembl, May 2017
  3. ^"Human PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^"Mouse PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ab"Entrez Gene: PAX4 paired box gene 4".
  6. ^Matsushita T, Yamaoka T, Otsuka S, Moritani M, Matsumoto T, Itakura M (Jan 1998). "Molecular cloning of mouse paired-box-containing gene (Pax)-4 from an islet beta cell line and deduced sequence of human Pax-4".Biochemical and Biophysical Research Communications.242 (1):176–80.Bibcode:1998BBRC..242..176M.doi:10.1006/bbrc.1997.7935.PMID 9439631.
  7. ^Inoue H, Nomiyama J, Nakai K, Matsutani A, Tanizawa Y, Oka Y (Feb 1998). "Isolation of full-length cDNA of mouse PAX4 gene and identification of its human homologue".Biochemical and Biophysical Research Communications.243 (2):628–33.Bibcode:1998BBRC..243..628I.doi:10.1006/bbrc.1998.8144.PMID 9480859.

Further reading

[edit]

External links

[edit]

This article incorporates text from theUnited States National Library of Medicine, which is in thepublic domain.

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(1) Basic domains
(1.1) Basicleucine zipper (bZIP)
(1.2) Basic helix-loop-helix (bHLH)
Group A
Group B
Group C
bHLH-PAS
Group D
Group E
Group F
bHLH-COE
(1.3)bHLH-ZIP
(1.4) NF-1
(1.5) RF-X
(1.6) Basic helix-span-helix (bHSH)
(2)Zinc finger DNA-binding domains
(2.1)Nuclear receptor(Cys4)
subfamily 1
subfamily 2
subfamily 3
subfamily 4
subfamily 5
subfamily 6
subfamily 0
(2.2) Other Cys4
(2.3) Cys2His2
(2.4) Cys6
(2.5) Alternating composition
(2.6) WRKY
(3.1)Homeodomain
Antennapedia
ANTP class
protoHOX
Hox-like
metaHOX
NK-like
other
(3.2) Paired box
(3.3)Fork head /winged helix
(3.4)Heat shock factors
(3.5) Tryptophan clusters
(3.6) TEA domain
  • transcriptional enhancer factor
(4)β-Scaffold factors with minor groove contacts
(4.1)Rel homology region
(4.2)STAT
(4.3) p53-like
(4.4)MADS box
(4.6)TATA-binding proteins
(4.7)High-mobility group
(4.9) Grainyhead
(4.10) Cold-shock domain
(4.11) Runt
(0) Other transcription factors
(0.2) HMGI(Y)
(0.3)Pocket domain
(0.5)AP-2/EREBP-related factors
(0.6) Miscellaneous
Retrieved from "https://en.wikipedia.org/w/index.php?title=PAX4&oldid=1321974602"
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