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Oomycete

From Wikipedia, the free encyclopedia
Fungus-like eukaryotic microorganism

Oomycetes
Asexual (A: sporangia, B: zoospores, C: chlamydospores) and sexual (D: oospores) reproductive structures of Phytophthora infestans (Peronosporales)
Asexual (A: sporangia, B: zoospores, C: chlamydospores) and sexual (D: oospores) reproductive structures ofPhytophthora infestans (Peronosporales)
Scientific classificationEdit this classification
Domain:Eukaryota
Clade:Sar
Clade:Stramenopiles
Clade:Pseudofungi
Phylum:Oomycota
Class:Oomycetes
Winter, 1880[1]
Orders and families
Synonyms
  • PeronosporomycetesDick, 2001[2]

TheOomycetes (/ˌ.əˈmsts/),[3] orOomycota, form a distinctphylogenetic lineage offungus-likeeukaryoticmicroorganisms within theStramenopiles. They arefilamentous andheterotrophic, and can reproduce bothsexually andasexually. Sexual reproduction of anoospore is the result of contact betweenhyphae of maleantheridia and femaleoogonia; these spores can overwinter and are known as resting spores.[4]: 409  Asexual reproduction involves the formation ofchlamydospores andsporangia, producingmotilezoospores.[4] Oomycetes occupy bothsaprophytic andpathogenic lifestyles, and include some of the most notorious pathogens of plants, causing devastating diseases such aslate blight of potato andsudden oak death. One oomycete, themycoparasitePythium oligandrum, is used forbiocontrol, attacking plant pathogenic fungi.[5] The oomycetes are also often referred to aswater molds (orwater moulds), although the water-preferring nature which led to that name is not true of most species, which are terrestrial pathogens.

Oomycetes were originally grouped withfungi due to similarities in morphology and lifestyle. However, molecular and phylogenetic studies revealed significant differences between fungi and oomycetes which means the latter are now grouped with thestramenopiles (which include some types ofalgae). The Oomycota have a very sparse fossil record; a possible oomycete has been described fromCretaceousamber.[6]

Etymology

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Oomycota comes fromoo- (Ancient Greek:ωόν,romanizedōon,lit.'egg') and-mycete (Ancient Greek:μύκητας,romanizedmýkitas,lit.'fungus'), referring to the large roundoogonia, structures containing the female gametes, that are characteristic of the oomycetes.

The name "water mold" refers to their earlier classification as fungi and their preference for conditions of high humidity and running surface water, which is characteristic for the basal taxa of the oomycetes.

Morphology

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The oomycetes rarely have septa (seehypha), and if they do, they are scarce,[7] appearing at the bases of sporangia, and sometimes in older parts of the filaments.[8] Some are unicellular, while others are filamentous and branching.[8]

Representation of an oomycete
  1. Anteriorflagellum
  2. Mastigonemes, "hairs" attached to flagellum
  3. Flattened cisternae
  4. Peripheralvesicle
  5. Phospholipid vesicle
  6. Contractile vacuole, regulates the quantity of water inside a cell
  7. Groove
  8. Golgi apparatus; modifiesproteins and sends them out of the cell
  9. Flagellar rootlet
  10. K-body (microbody)
  11. Basal body
  12. Nucleolus
  13. Nucleus
  14. Endoplasmic reticulum, the transport network for molecules going to specific parts of the cell
  15. Mitochondrion, createsATP (energy) for the cell
  16. Lipid vesicle
  17. Cellulose vesicle
  18. Posterior flagellum

Classification

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Simplified phylogeny.[citation needed]
Asexual structures (sporangia) inSaprolegniales,Albuginales andPeronosporales[citation needed]
Sexual structures (onlyoogonia, antheridia not shown) ofSaprolegnia.[citation needed]

Previously the group was arranged into six orders.[8]

  • TheSaprolegniales are the most widespread. Many break down decaying matter; others are parasites.
  • TheLeptomitales have wall thickenings that give their continuous cell body the appearance of septation. They bear chitin and often reproduce asexually.
  • TheRhipidiales use rhizoids to attach their thallus to the bed of stagnant or polluted water bodies.
  • TheAlbuginales are considered by some authors to be a family (Albuginaceae) within the Peronosporales, although it has been shown that they are phylogenetically distinct from this order.
  • ThePeronosporales too are mainly saprophytic or parasitic on plants, and have an aseptate, branching form. Many of the most damaging agricultural parasites belong to this order.
  • TheLagenidiales are the most primitive; some are filamentous, others unicellular; they are generally parasitic.

However more recently this has been expanded considerably.[9][10]

Phylogenetic relationships

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Pythium sp. (Peronosporales), which causespythiosis in animals, under microscope.
Symptom oflate blight (P. infestans, Peronosporales) on the underside of a potato leaf.
Albugo candida (Albuginales) on shepherd's purse (Capsella bursa-pastoris, Brassicales).

Internal

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External

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This group was originally classified among thefungi (the name "oomycota" means "egg fungus") and later treated asprotists, based on general morphology and lifestyle.[6] Acladistic analysis based on modern discoveries about the biology of these organisms supports a relatively close relationship with somephotosynthetic organisms, such asbrown algae anddiatoms.[11] A commontaxonomic classification based on these data, places theclass oomycetes class along with other classes such as the brown algae within thephylumStramenopile.

This relationship is supported by a number of observed differences between the characteristics of oomycetes and fungi. For instance, thecell walls of oomycetes are composed ofcellulose rather thanchitin[12] and generally do not haveseptations. Also, in the vegetative state they havediploid nuclei, whereas fungi havehaploid nuclei. Most oomycetes produce self-motile zoospores with twoflagella. One flagellum has a "whiplash" morphology, and the other a branched "tinsel" morphology. The "tinsel" flagellum is unique to the Kingdom Heterokonta. Spores of the few fungal groups which retain flagella (such as theChytridiomycetes) have only one whiplash flagellum.[12] Oomycota and fungi have different metabolic pathways for synthesizinglysine and have a number of enzymes that differ.[12] The ultrastructure is also different, with oomycota having tubular mitochondrialcristae and fungi having flattened cristae.[12]

In spite of this, manyspecies of oomycetes are still described or listed as types of fungi and may sometimes be referred to aspseudofungi, or lower fungi.

Biology

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Reproduction

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Life cycle ofPhytophthora infestans (Peronosporales) onpotato. M:meiosis, P:plasmogamy, K:karyogamy, n:haploid, 2n:diploid.

Most of the oomycetes produce two distinct types of spores. The main dispersive spores are asexual, self-motilespores calledzoospores, which are capable of chemotaxis (movement toward or away from a chemical signal, such as those released by potential food sources) in surface water (including precipitation on plant surfaces). A few oomycetes produce aerial asexual spores that are distributed by wind. They also produce sexual spores, calledoospores, that are translucent, double-walled, spherical structures used to survive adverse environmental conditions.

Ecology and pathogenicity

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Unidentified water mold on dead larval mayfly.
Aculture ofAchlya sp. (Saprolegniales) isolated from a stream.
Sea trout suffering fromUDN with secondarySaprolegnia infections.

Many oomycetes species are economically important, aggressive algae andplant pathogens.[13][14] Some species cancause disease in fish, and at least one is a pathogen of mammals. The majority of the plant pathogenic species can be classified into four groups, although more exist.

References

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  1. ^Winter, G.Rabenhorst's Kryptogamen-Flora, 2nd ed., vol. 1, part 1,p. 32Archived 2014-12-13 at theWayback Machine, 1880 [1879].
  2. ^Dick, M. W. (2001).Straminipilous fungus. Dordrecht, the Netherlands: Kluwer Academic Publishers, p. 289.
  3. ^"oomycete".Collins English Dictionary.HarperCollins. Retrieved5 September 2023.
  4. ^abAgrios, George.Plant Pathology (5 ed.). Academic Press.ISBN 978-0-12-044565-3.
  5. ^Vallance, J.; Le Floch, G.; Deniel, F.; Barbier, G.; Levesque, C. A.; Rey, P. (2009)."Influence of Pythium oligandrum Biocontrol on Fungal and Oomycete Population Dynamics in the Rhizosphere".Applied and Environmental Microbiology.75 (14):4790–800.Bibcode:2009ApEnM..75.4790V.doi:10.1128/AEM.02643-08.PMC 2708430.PMID 19447961.
  6. ^ab"Introduction to the Oomycota".Archived from the original on 2003-10-09. Retrieved2014-07-07.
  7. ^Kortekamp, A. (2005). "Growth, occurrence and development of septa in Plasmopara viticola and other members of the Peronosporaceae using light- and epifluorescence-microscopy".Mycological Research.109 (Pt 5):640–648.doi:10.1017/S0953756205002418.PMID 16018320.
  8. ^abcSumbali, Geeta; Johri, B. M (January 2005).The fungi.ISBN 978-1-84265-153-7.
  9. ^Ruggiero; et al. (2015), "Higher Level Classification of All Living Organisms",PLOS ONE,10 (4) e0119248,Bibcode:2015PLoSO..1019248R,doi:10.1371/journal.pone.0119248,PMC 4418965,PMID 25923521
  10. ^Silar, Philippe (2016),"Protistes Eucaryotes: Origine, Evolution et Biologie des Microbes Eucaryotes",HAL Archives-ouvertes:1–462,archived from the original on 2016-05-13, retrieved2016-07-16
  11. ^Yoon, H. S.; Andersen, R. A.; Boo, S. M.; Bhattacharya, D. (2009-01-01), Schaechter, Moselio (ed.),"Stramenopiles",Encyclopedia of Microbiology (Third Edition), Oxford: Academic Press, pp. 721–731,doi:10.1016/b978-012373944-5.00253-4,ISBN 978-0-12-373944-5, retrieved2025-01-05
  12. ^abcdVan der Auwera G, De Baere R, Van de Peer Y, De Rijk P, Van den Broeck I, De Wachter R (July 1995). "The phylogeny of the Hyphochytriomycota as deduced from ribosomal RNA sequences of Hyphochytrium catenoides".Mol. Biol. Evol.12 (4):671–8.doi:10.1093/oxfordjournals.molbev.a040245.PMID 7659021.
  13. ^Agrios, George N. (2005).Plant Pathology. 5th ed. Academic Press.link.
  14. ^Schwelm A, Badstöber J, Bulman S, Desoignies N, Etemadi M, Falloon RE, Gachon CM, Legreve A, Lukeš J, Merz U, Nenarokova A, Strittmatter M, Sullivan BK, Neuhauser S (April 2018)."Not in your usual Top 10: protists that infect plants and algae".Molecular Plant Pathology.19 (4):1029–1044.doi:10.1111/mpp.12580.PMC 5772912.PMID 29024322.
  15. ^Haas, BJ; Kamoun, S; Zody, MC; Jiang, RH; Handsaker, RE; Cano, LM; Grabherr, M; Kodira, CD; et al. (2009)."Genome sequence and analysis of the Irish potato famine pathogen Phytophthora infestans"(PDF).Nature.461 (7262):393–8.Bibcode:2009Natur.461..393H.doi:10.1038/nature08358.PMID 19741609.Archived(PDF) from the original on 2024-02-20. Retrieved2024-02-20.
  16. ^Vettraino, A. M.; Morel, O.; Perlerou, C.; Robin, C.; Diamandis, S.; Vannini, A. (2005). "Occurrence and distribution of Phytophthora species in European chestnut stands, and their association with Ink Disease and crown decline".European Journal of Plant Pathology.111 (2):169–180.doi:10.1007/s10658-004-1882-0.S2CID 2041934.

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