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NFIL3

From Wikipedia, the free encyclopedia
Protein-coding gene in the species Homo sapiens

NFIL3
Identifiers
AliasesNFIL3, E4BP4, IL3BP1, NF-IL3A, NFIL3A, nuclear factor, interleukin 3 regulated
External IDsOMIM:605327;MGI:109495;HomoloGene:3928;GeneCards:NFIL3;OMA:NFIL3 - orthologs
Gene location (Human)
Chromosome 9 (human)
Chr.Chromosome 9 (human)[1]
Chromosome 9 (human)
Genomic location for NFIL3
Genomic location for NFIL3
Band9q22.31Start91,409,045bp[1]
End91,423,832bp[1]
Gene location (Mouse)
Chromosome 13 (mouse)
Chr.Chromosome 13 (mouse)[2]
Chromosome 13 (mouse)
Genomic location for NFIL3
Genomic location for NFIL3
Band13 B1|13 27.68 cMStart53,121,245bp[2]
End53,135,109bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • vena cava

  • pericardium

  • gastric mucosa

  • left uterine tube

  • cartilage tissue

  • popliteal artery

  • tibial arteries

  • stromal cell of endometrium

  • periodontal fiber

  • right ventricle
Top expressed in
  • muscle of thigh

  • gastrula

  • granulocyte

  • zygote

  • primary oocyte

  • secondary oocyte

  • digastric muscle

  • left lobe of liver

  • plantaris muscle

  • sternocleidomastoid muscle
More reference expression data
BioGPS
More reference expression data
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo /QuickGO
Orthologs
SpeciesHumanMouse
Entrez

4783

18030

Ensembl

ENSG00000165030

ENSMUSG00000056749

UniProt

Q16649

O08750

RefSeq (mRNA)

NM_005384
NM_001289999
NM_001290000

NM_017373

RefSeq (protein)

NP_001276928
NP_001276929
NP_005375

NP_059069

Location (UCSC)Chr 9: 91.41 – 91.42 MbChr 13: 53.12 – 53.14 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Nuclear factor, interleukin 3 regulated, also known asNFIL3 orE4BP4 is aprotein which in humans is encoded by theNFIL3gene.[5]

Function

[edit]

Expression of interleukin-3 (IL-3) is restricted to activatedT cells, natural killer (NK) cells, andmast cell lines.Transcription initiation depends on the activating capacity of specific protein factors, such as NFIL3, that bind to regulatory regions of the gene, usually upstream of the transcription start site.[5][6]

References

[edit]
  1. ^abcGRCh38: Ensembl release 89: ENSG00000165030Ensembl, May 2017
  2. ^abcGRCm38: Ensembl release 89: ENSMUSG00000056749Ensembl, May 2017
  3. ^"Human PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^"Mouse PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ab"Entrez Gene: NFIL3 nuclear factor, interleukin 3 regulated".
  6. ^Zhang W, Zhang J, Kornuc M, Kwan K, Frank R, Nimer SD (November 1995)."Molecular cloning and characterization of NF-IL3A, a transcriptional activator of the human interleukin-3 promoter".Molecular and Cellular Biology.15 (11):6055–63.doi:10.1128/mcb.15.11.6055.PMC 230857.PMID 7565758.

Further reading

[edit]

This article incorporates text from theUnited States National Library of Medicine, which is in thepublic domain.

(1) Basic domains
(1.1) Basicleucine zipper (bZIP)
(1.2) Basic helix-loop-helix (bHLH)
Group A
Group B
Group C
bHLH-PAS
Group D
Group E
Group F
bHLH-COE
(1.3)bHLH-ZIP
(1.4) NF-1
(1.5) RF-X
(1.6) Basic helix-span-helix (bHSH)
(2)Zinc finger DNA-binding domains
(2.1)Nuclear receptor(Cys4)
subfamily 1
subfamily 2
subfamily 3
subfamily 4
subfamily 5
subfamily 6
subfamily 0
(2.2) Other Cys4
(2.3) Cys2His2
(2.4) Cys6
(2.5) Alternating composition
(2.6) WRKY
(3.1)Homeodomain
Antennapedia
ANTP class
protoHOX
Hox-like
metaHOX
NK-like
other
(3.2) Paired box
(3.3)Fork head /winged helix
(3.4)Heat shock factors
(3.5) Tryptophan clusters
(3.6) TEA domain
  • transcriptional enhancer factor
(4)β-Scaffold factors with minor groove contacts
(4.1)Rel homology region
(4.2)STAT
(4.3) p53-like
(4.4)MADS box
(4.6)TATA-binding proteins
(4.7)High-mobility group
(4.9) Grainyhead
(4.10) Cold-shock domain
(4.11) Runt
(0) Other transcription factors
(0.2) HMGI(Y)
(0.3)Pocket domain
(0.5)AP-2/EREBP-related factors
(0.6) Miscellaneous
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