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NEUROD2

From Wikipedia, the free encyclopedia
Protein-coding gene in the species Homo sapiens
NEUROD2
Identifiers
AliasesNEUROD2, NDRF, bHLHa1, neuronal differentiation 2, EIEE72, DEE72
External IDsOMIM:601725;MGI:107755;HomoloGene:4489;GeneCards:NEUROD2;OMA:NEUROD2 - orthologs
Gene location (Human)
Chromosome 17 (human)
Chr.Chromosome 17 (human)[1]
Chromosome 17 (human)
Genomic location for NEUROD2
Genomic location for NEUROD2
Band17q12Start39,603,536bp[1]
End39,609,777bp[1]
Gene location (Mouse)
Chromosome 11 (mouse)
Chr.Chromosome 11 (mouse)[2]
Chromosome 11 (mouse)
Genomic location for NEUROD2
Genomic location for NEUROD2
Band11 D|11 61.75 cMStart98,216,241bp[2]
End98,220,474bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • ganglionic eminence

  • right hemisphere of cerebellum

  • right frontal lobe

  • cingulate gyrus

  • anterior cingulate cortex

  • Brodmann area 9

  • paraflocculus of cerebellum

  • hippocampus proper

  • prefrontal cortex

  • superior frontal gyrus
Top expressed in
  • CA3 field

  • primary visual cortex

  • perirhinal cortex

  • entorhinal cortex

  • dentate gyrus of hippocampal formation granule cell

  • cerebellar cortex

  • ventricular zone

  • superior frontal gyrus

  • Region I of hippocampus proper

  • hippocampus proper
More reference expression data
BioGPS
More reference expression data
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo /QuickGO
Orthologs
SpeciesHumanMouse
Entrez

4761

18013

Ensembl

ENSG00000171532

ENSMUSG00000038255

UniProt

Q15784

Q62414

RefSeq (mRNA)

NM_006160

NM_010895

RefSeq (protein)

NP_006151

NP_035025

Location (UCSC)Chr 17: 39.6 – 39.61 MbChr 11: 98.22 – 98.22 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Neurogenic differentiation factor 2 is aprotein that in humans is encoded by theNEUROD2gene.[5][6]

Function

[edit]

This gene encodes a member of theneuroD family of neurogenicbasic helix-loop-helix (bHLH) proteins. Expression of this gene can induce transcription from neuron-specific promoters, such as theGAP-43 promoter, which contain a specific DNA sequence known as an E-box. The product of the human gene can induce neurogenic differentiation in non-neuronal cells inXenopus embryos, and is thought to play a role in the determination and maintenance of neuronal cell fates.[6]

Interactions

[edit]

NEUROD2 has been shown tointeract withProtein kinase N1.[7]

References

[edit]
  1. ^abcGRCh38: Ensembl release 89: ENSG00000171532Ensembl, May 2017
  2. ^abcGRCm38: Ensembl release 89: ENSMUSG00000038255Ensembl, May 2017
  3. ^"Human PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^"Mouse PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^Tamimi RM, Steingrimsson E, Montgomery-Dyer K, Copeland NG, Jenkins NA, Tapscott SJ (Mar 1997). "NEUROD2 and NEUROD3 genes map to human chromosomes 17q12 and 5q23-q31 and mouse chromosomes 11 and 13, respectively".Genomics.40 (2):355–7.doi:10.1006/geno.1996.4578.PMID 9119405.
  6. ^ab"Entrez Gene: NEUROD2 neurogenic differentiation 2".
  7. ^Shibata H, Oda H, Mukai H, Oishi K, Misaki K, Ohkubo H, Ono Y (Dec 1999). "Interaction of PKN with a neuron-specific basic helix-loop-helix transcription factor, NDRF/NeuroD2".Brain Research. Molecular Brain Research.74 (1–2):126–34.doi:10.1016/S0169-328X(99)00273-9.PMID 10640683.

Further reading

[edit]

External links

[edit]

This article incorporates text from theUnited States National Library of Medicine, which is in thepublic domain.

(1) Basic domains
(1.1) Basicleucine zipper (bZIP)
(1.2) Basic helix-loop-helix (bHLH)
Group A
Group B
Group C
bHLH-PAS
Group D
Group E
Group F
bHLH-COE
(1.3)bHLH-ZIP
(1.4) NF-1
(1.5) RF-X
(1.6) Basic helix-span-helix (bHSH)
(2)Zinc finger DNA-binding domains
(2.1)Nuclear receptor(Cys4)
subfamily 1
subfamily 2
subfamily 3
subfamily 4
subfamily 5
subfamily 6
subfamily 0
(2.2) Other Cys4
(2.3) Cys2His2
(2.4) Cys6
(2.5) Alternating composition
(2.6) WRKY
(3.1)Homeodomain
Antennapedia
ANTP class
protoHOX
Hox-like
metaHOX
NK-like
other
(3.2) Paired box
(3.3)Fork head /winged helix
(3.4)Heat shock factors
(3.5) Tryptophan clusters
(3.6) TEA domain
  • transcriptional enhancer factor
(4)β-Scaffold factors with minor groove contacts
(4.1)Rel homology region
(4.2)STAT
(4.3) p53-like
(4.4)MADS box
(4.6)TATA-binding proteins
(4.7)High-mobility group
(4.9) Grainyhead
(4.10) Cold-shock domain
(4.11) Runt
(0) Other transcription factors
(0.2) HMGI(Y)
(0.3)Pocket domain
(0.5)AP-2/EREBP-related factors
(0.6) Miscellaneous
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