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Myocyte-specific enhancer factor 2A

From Wikipedia, the free encyclopedia
Protein-coding gene in the species Homo sapiens
MEF2A
Available structures
PDBOrtholog search:PDBeRCSB
List of PDB id codes

1C7U,1EGW,1LEW,3KOV,3MU6,3P57

Identifiers
AliasesMEF2A, ADCAD1, RSRFC4, RSRFC9, mef2, myocyte enhancer factor 2A
External IDsOMIM:600660;MGI:99532;HomoloGene:4080;GeneCards:MEF2A;OMA:MEF2A - orthologs
Gene location (Human)
Chromosome 15 (human)
Chr.Chromosome 15 (human)[1]
Chromosome 15 (human)
Genomic location for MEF2A
Genomic location for MEF2A
Band15q26.3Start99,565,417bp[1]
End99,716,488bp[1]
Gene location (Mouse)
Chromosome 7 (mouse)
Chr.Chromosome 7 (mouse)[2]
Chromosome 7 (mouse)
Genomic location for MEF2A
Genomic location for MEF2A
Band7 C|7 36.72 cMStart67,231,163bp[2]
End67,372,858bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • Achilles tendon

  • myocardium

  • cardiac muscle tissue of right atrium

  • right ventricle

  • myocardium of left ventricle

  • biceps brachii

  • Skeletal muscle tissue of biceps brachii

  • skin of thigh

  • middle temporal gyrus

  • tibia
Top expressed in
  • medial dorsal nucleus

  • lateral geniculate nucleus

  • lateral septal nucleus

  • medial geniculate nucleus

  • atrioventricular valve

  • stroma of bone marrow

  • right ventricle

  • atrium

  • cerebellar vermis

  • ankle
More reference expression data
BioGPS




More reference expression data
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo /QuickGO
Orthologs
SpeciesHumanMouse
Entrez

4205

17258

Ensembl

ENSG00000068305

ENSMUSG00000030557

UniProt

Q02078

Q60929

RefSeq (mRNA)
NM_001130926
NM_001130927
NM_001130928
NM_001171894
NM_005587

NM_001319206
NM_001352614
NM_001352615
NM_001352616
NM_001352617
NM_001352618
NM_001365201
NM_001365202
NM_001365203
NM_001365204
NM_001365205
NM_001365206
NM_001365207
NM_001365208
NM_001365209
NM_001365210
NM_001365211
NM_001393558
NM_001393559
NM_001393560
NM_001393561

NM_001033713
NM_001291191
NM_001291192
NM_001291195
NM_001291196

NM_001357324
NM_001357325

RefSeq (protein)
NP_001124398
NP_001124399
NP_001124400
NP_001165365
NP_001306135

NP_005578
NP_001339543
NP_001339544
NP_001339545
NP_001339546
NP_001339547
NP_001352130
NP_001352131
NP_001352132
NP_001352133
NP_001352134
NP_001352135
NP_001352136
NP_001352137
NP_001352138
NP_001352139
NP_001352140

NP_001028885
NP_001278120
NP_001278121
NP_001278124
NP_001278125

NP_001344253
NP_001344254

Location (UCSC)Chr 15: 99.57 – 99.72 MbChr 7: 67.23 – 67.37 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Myocyte-specific enhancer factor 2A is aprotein that in humans is encoded by theMEF2Agene.[5][6] MEF2A is atranscription factor in theMef2 family. In humans it is located onchromosome 15q26. Certainmutations in MEF2A cause anautosomal dominant form ofcoronary artery disease andmyocardial infarction.

Function

[edit]

The process of differentiation from mesodermal precursor cells to myoblasts has led to the discovery of a variety of tissue-specific factors that regulate muscle gene expression. The myogenic basic helix-loop-helix proteins, including myoD (MIM 159970), myogenin (MIM 159980), MYF5 (MIM 159990), and MRF4 (MIM 159991) are 1 class of identified factors. A second family of DNA binding regulatory proteins is the myocyte-specific enhancer factor-2 (MEF2) family. Each of these proteins binds to the MEF2 target DNA sequence present in the regulatory regions of many, if not all, muscle-specific genes. The MEF2 genes are members of the MADS gene family (named for the yeast mating type-specific transcription factor MCM1, the plant homeotic genes 'agamous' and 'deficiens' and the human serum response factor SRF (MIM 600589)), a family that also includes several homeotic genes and other transcription factors, all of which share a conserved DNA-binding domain.[supplied by OMIM][6]

Interactions

[edit]

Myocyte-specific enhancer factor 2A has been shown tointeract with:

References

[edit]
  1. ^abcGRCh38: Ensembl release 89: ENSG00000068305Ensembl, May 2017
  2. ^abcGRCm38: Ensembl release 89: ENSMUSG00000030557Ensembl, May 2017
  3. ^"Human PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^"Mouse PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^Yu YT, Breitbart RE, Smoot LB, Lee Y, Mahdavi V, Nadal-Ginard B (October 1992)."Human myocyte-specific enhancer factor 2 comprises a group of tissue-restricted MADS box transcription factors".Genes Dev.6 (9):1783–98.doi:10.1101/gad.6.9.1783.PMID 1516833.
  6. ^ab"Entrez Gene: MEF2A MADS box transcription enhancer factor 2, polypeptide A (myocyte enhancer factor 2A)".
  7. ^Mao Z, Nadal-Ginard B (June 1996)."Functional and physical interactions between mammalian achaete-scute homolog 1 and myocyte enhancer factor 2A".J. Biol. Chem.271 (24):14371–5.doi:10.1074/jbc.271.24.14371.PMID 8662987.
  8. ^abDe Luca A, Severino A, De Paolis P, Cottone G, De Luca L, De Falco M, Porcellini A, Volpe M, Condorelli G (February 2003)."p300/cAMP-response-element-binding-protein ('CREB')-binding protein (CBP) modulates co-operation between myocyte enhancer factor 2A (MEF2A) and thyroid hormone receptor-retinoid X receptor".Biochem. J.369 (Pt 3):477–84.doi:10.1042/BJ20020057.PMC 1223100.PMID 12371907.
  9. ^abMiska EA, Karlsson C, Langley E, Nielsen SJ, Pines J, Kouzarides T (September 1999)."HDAC4 deacetylase associates with and represses the MEF2 transcription factor".EMBO J.18 (18):5099–107.doi:10.1093/emboj/18.18.5099.PMC 1171580.PMID 10487761.
  10. ^abcLemercier C, Verdel A, Galloo B, Curtet S, Brocard MP, Khochbin S (May 2000)."mHDA1/HDAC5 histone deacetylase interacts with and represses MEF2A transcriptional activity".J. Biol. Chem.275 (20):15594–9.doi:10.1074/jbc.M908437199.PMID 10748098.
  11. ^Zhao M, New L, Kravchenko VV, Kato Y, Gram H, di Padova F, Olson EN, Ulevitch RJ, Han J (January 1999)."Regulation of the MEF2 family of transcription factors by p38".Mol. Cell. Biol.19 (1):21–30.doi:10.1128/mcb.19.1.21.PMC 83862.PMID 9858528.
  12. ^Yang SH, Galanis A, Sharrocks AD (June 1999)."Targeting of p38 mitogen-activated protein kinases to MEF2 transcription factors".Mol. Cell. Biol.19 (6):4028–38.doi:10.1128/mcb.19.6.4028.PMC 104362.PMID 10330143.
  13. ^Ornatsky OI, McDermott JC (October 1996)."MEF2 protein expression, DNA binding specificity and complex composition, and transcriptional activity in muscle and non-muscle cells".J. Biol. Chem.271 (40):24927–33.doi:10.1074/jbc.271.40.24927.PMID 8798771.
  14. ^Quinn ZA, Yang CC, Wrana JL, McDermott JC (February 2001)."Smad proteins function as co-modulators for MEF2 transcriptional regulatory proteins".Nucleic Acids Res.29 (3):732–42.doi:10.1093/nar/29.3.732.PMC 30396.PMID 11160896.

Further reading

[edit]

External links

[edit]
PDB gallery
  • 1c7u: Complex of the DNA binding core domain of the transcription factor MEF2A with a 20mer oligonucleotide
    1c7u: Complex of the DNA binding core domain of the transcription factor MEF2A with a 20mer oligonucleotide
  • 1egw: CRYSTAL STRUCTURE OF MEF2A CORE BOUND TO DNA
    1egw: CRYSTAL STRUCTURE OF MEF2A CORE BOUND TO DNA
(1) Basic domains
(1.1) Basicleucine zipper (bZIP)
(1.2) Basic helix-loop-helix (bHLH)
Group A
Group B
Group C
bHLH-PAS
Group D
Group E
Group F
bHLH-COE
(1.3)bHLH-ZIP
(1.4) NF-1
(1.5) RF-X
(1.6) Basic helix-span-helix (bHSH)
(2)Zinc finger DNA-binding domains
(2.1)Nuclear receptor(Cys4)
subfamily 1
subfamily 2
subfamily 3
subfamily 4
subfamily 5
subfamily 6
subfamily 0
(2.2) Other Cys4
(2.3) Cys2His2
(2.4) Cys6
(2.5) Alternating composition
(2.6) WRKY
(3.1)Homeodomain
Antennapedia
ANTP class
protoHOX
Hox-like
metaHOX
NK-like
other
(3.2) Paired box
(3.3)Fork head /winged helix
(3.4)Heat shock factors
(3.5) Tryptophan clusters
(3.6) TEA domain
  • transcriptional enhancer factor
(4)β-Scaffold factors with minor groove contacts
(4.1)Rel homology region
(4.2)STAT
(4.3) p53-like
(4.4)MADS box
(4.6)TATA-binding proteins
(4.7)High-mobility group
(4.9) Grainyhead
(4.10) Cold-shock domain
(4.11) Runt
(0) Other transcription factors
(0.2) HMGI(Y)
(0.3)Pocket domain
(0.5)AP-2/EREBP-related factors
(0.6) Miscellaneous
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