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LMBR1

From Wikipedia, the free encyclopedia
Protein-coding gene in the species Homo sapiens

LMBR1
Identifiers
AliasesLMBR1, ACHP, C7orf2, DIF14, PPD2, TPT, ZRS, LSS, THYP, limb development membrane protein 1
External IDsOMIM:605522;MGI:1861746;HomoloGene:49706;GeneCards:LMBR1;OMA:LMBR1 - orthologs
Gene location (Human)
Chromosome 7 (human)
Chr.Chromosome 7 (human)[1]
Chromosome 7 (human)
Genomic location for LMBR1
Genomic location for LMBR1
Band7q36.3Start156,668,946bp[1]
End156,893,216bp[1]
Gene location (Mouse)
Chromosome 5 (mouse)
Chr.Chromosome 5 (mouse)[2]
Chromosome 5 (mouse)
Genomic location for LMBR1
Genomic location for LMBR1
Band5 B1|5 14.81 cMStart29,434,800bp[2]
End29,583,388bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • sural nerve

  • Achilles tendon

  • bone marrow cells

  • right adrenal cortex

  • left adrenal gland

  • left adrenal cortex

  • epithelium of colon

  • ganglionic eminence

  • islet of Langerhans

  • smooth muscle tissue
Top expressed in
  • spermatid

  • spermatocyte

  • Rostral migratory stream

  • substantia nigra

  • primary oocyte

  • nucleus accumbens

  • interventricular septum

  • secondary oocyte

  • Paneth cell

  • Temporal Lobe
More reference expression data
BioGPS
n/a
Orthologs
SpeciesHumanMouse
Entrez

64327

56873

Ensembl

ENSG00000105983

ENSMUSG00000010721

UniProt

Q8WVP7

Q9JIT0

RefSeq (mRNA)
NM_022458
NM_001350953
NM_001350954
NM_001350955
NM_001350956

NM_001350957
NM_001350958
NM_001363409
NM_001363410
NM_001363411
NM_001363412
NM_001363413

NM_020295

RefSeq (protein)
NP_071903
NP_001337882
NP_001337883
NP_001337884
NP_001337885

NP_001337886
NP_001337887
NP_001350338
NP_001350339
NP_001350340
NP_001350341
NP_001350342

NP_064691

Location (UCSC)Chr 7: 156.67 – 156.89 MbChr 5: 29.43 – 29.58 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Limb region 1 protein homolog is aprotein that in humans is encoded by theLMBR1gene.[5][6][7]

This gene encodes a member of the LMBR1-like membrane protein family. Another member of this protein family has been shown to be a lipocalin transmembrane receptor. A highly conserved, cis-acting regulatory module for thesonic hedgehog (protein) gene is located within an intron of this gene. Consequently, disruption of this genic region can alter sonic hedgehog expression and affect limb patterning, but if this gene functions directly in limb development is unknown. Mutations and chromosomal deletions and rearrangements in this genic region are associated withacheiropody and preaxialpolydactyly, which likely result from altered sonic hedgehog expression.[7]

References

[edit]
  1. ^abcGRCh38: Ensembl release 89: ENSG00000105983Ensembl, May 2017
  2. ^abcGRCm38: Ensembl release 89: ENSMUSG00000010721Ensembl, May 2017
  3. ^"Human PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^"Mouse PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^Heus HC, Hing A, van Baren MJ, Joosse M, Breedveld GJ, Wang JC, Burgess A, Donnis-Keller H, Berglund C, Zguricas J, Scherer SW, Rommens JM, Oostra BA, Heutink P (Aug 1999). "A physical and transcriptional map of the preaxial polydactyly locus on chromosome 7q36".Genomics.57 (3):342–51.doi:10.1006/geno.1999.5796.PMID 10329000.
  6. ^Ianakiev P, van Baren MJ, Daly MJ, Toledo SP, Cavalcanti MG, Neto JC, Silveira EL, Freire-Maia A, Heutink P, Kilpatrick MW, Tsipouras P (Jan 2001)."Acheiropodia is caused by a genomic deletion in C7orf2, the human orthologue of the Lmbr1 gene".Am J Hum Genet.68 (1):38–45.doi:10.1086/316955.PMC 1234933.PMID 11090342.
  7. ^ab"Entrez Gene: LMBR1 limb region 1 homolog (mouse)".

Further reading

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