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KIF5A

From Wikipedia, the free encyclopedia

Protein-coding gene in humans

KIF5A
Available structures
PDBOrtholog search:PDBeRCSB
List of PDB id codes

4UXT,4UXY,4UY0

Identifiers
AliasesKIF5A, D12S1889, MY050, NKHC, SPG10, kinesin family member 5A, NEIMY, ALS25
External IDsOMIM:602821;MGI:109564;HomoloGene:55861;GeneCards:KIF5A;OMA:KIF5A - orthologs
Gene location (Human)
Chromosome 12 (human)
Chr.Chromosome 12 (human)[1]
Chromosome 12 (human)
Genomic location for KIF5A
Genomic location for KIF5A
Band12q13.3Start57,546,026bp[1]
End57,586,633bp[1]
Gene location (Mouse)
Chromosome 10 (mouse)
Chr.Chromosome 10 (mouse)[2]
Chromosome 10 (mouse)
Genomic location for KIF5A
Genomic location for KIF5A
Band10 D3|10 74.5 cMStart127,061,565bp[2]
End127,099,217bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • right frontal lobe

  • right hemisphere of cerebellum

  • Brodmann area 9

  • cingulate gyrus

  • anterior cingulate cortex

  • prefrontal cortex

  • ganglionic eminence

  • C1 segment

  • amygdala

  • nucleus accumbens
Top expressed in
  • globus pallidus

  • lateral geniculate nucleus

  • superior frontal gyrus

  • subiculum

  • lateral hypothalamus

  • pontine nuclei

  • anterior amygdaloid area

  • ventral tegmental area

  • medial geniculate nucleus

  • nucleus accumbens
More reference expression data
BioGPS
More reference expression data
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo /QuickGO
Orthologs
SpeciesHumanMouse
Entrez

3798

16572

Ensembl

ENSG00000155980

ENSMUSG00000074657

UniProt

Q12840

P33175

RefSeq (mRNA)

NM_004984
NM_001354705
NM_032624

NM_001039000
NM_008447

RefSeq (protein)

NP_004975
NP_001341634

NP_001034089
NP_032473

Location (UCSC)Chr 12: 57.55 – 57.59 MbChr 10: 127.06 – 127.1 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Kinesin family member 5A is aprotein that in humans is encoded by theKIF5Agene. It is part of thekinesin family ofmotor proteins.[5][6][7]

This gene encodes a member of the kinesin family of proteins. Members of this family are part of a multi-subunit complex that functions as a microtubule motor in intracellular organelle transport. Mutations in this gene cause autosomal dominant spastic paraplegia 10.[7]

Interactions

[edit]

KIF5A has been shown tointeract withKLC1.[8][9]

Clinical significance

[edit]

Mutations inKIF5A have been reported to causehereditary spastic paraplegia type 10 (SPG1).[10]

Mutations inKIF5A have also been found to causeamyotrophic lateral sclerosis.[11]

KIF5A has been shown to play a role inAlzheimer's disease by modulating the toxic effect of beta-amyloid on axonal transport of mitochondria.[12]

References

[edit]
  1. ^abcGRCh38: Ensembl release 89: ENSG00000155980Ensembl, May 2017
  2. ^abcGRCm38: Ensembl release 89: ENSMUSG00000074657Ensembl, May 2017
  3. ^"Human PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^"Mouse PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^Hamlin PJ, Jones PF, Leek JP, Bransfield K, Lench NJ, Aldersley MA, et al. (February 1999). "Assignment of GALGT encoding beta-1, 4N-acetylgalactosaminyl-transferase (GalNAc-T) and KIF5A encoding neuronal kinesin (D12S1889) to human chromosome band 12q13 by assignment to ICI YAC 26EG10 and in situ hybridization. medjph@stjames.leeds.ac.uk".Cytogenetics and Cell Genetics.82 (3–4):267–8.doi:10.1159/000015115.PMID 9858832.S2CID 84466204.
  6. ^Reid E, Dearlove AM, Rhodes M, Rubinsztein DC (September 1999)."A new locus for autosomal dominant "pure" hereditary spastic paraplegia mapping to chromosome 12q13, and evidence for further genetic heterogeneity".American Journal of Human Genetics.65 (3):757–63.doi:10.1086/302555.PMC 1377983.PMID 10441583.
  7. ^ab"Entrez Gene: KIF5A kinesin family member 5A".
  8. ^Rahman A, Friedman DS, Goldstein LS (June 1998)."Two kinesin light chain genes in mice. Identification and characterization of the encoded proteins".The Journal of Biological Chemistry.273 (25):15395–403.doi:10.1074/jbc.273.25.15395.PMID 9624122.
  9. ^Rahman A, Kamal A, Roberts EA, Goldstein LS (September 1999)."Defective kinesin heavy chain behavior in mouse kinesin light chain mutants".The Journal of Cell Biology.146 (6):1277–88.doi:10.1083/jcb.146.6.1277.PMC 2156125.PMID 10491391.
  10. ^Reid E, Kloos M, Ashley-Koch A, Hughes L, Bevan S, Svenson IK, et al. (November 2002)."A kinesin heavy chain (KIF5A) mutation in hereditary spastic paraplegia (SPG10)".American Journal of Human Genetics.71 (5):1189–94.doi:10.1086/344210.PMC 385095.PMID 12355402.
  11. ^Nicolas A, Kenna KP, Renton AE, Ticozzi N, Faghri F, Chia R, et al. (March 2018)."Genome-wide Analyses Identify KIF5A as a Novel ALS Gene".Neuron.97 (6): 1268–1283.e6.doi:10.1016/j.neuron.2018.02.027.PMC 5867896.PMID 29566793.
  12. ^Wang Q, Tian J, Chen H, Du H, Guo L (July 2019). "Amyloid beta-mediated KIF5A deficiency disrupts anterograde axonal mitochondrial movement".Neurobiology of Disease.127:410–418.doi:10.1016/j.nbd.2019.03.021.PMID 30923004.S2CID 85496004.

Further reading

[edit]

External links

[edit]
  • Overview of all the structural information available in thePDB forUniProt:Q12840 (Kinesin heavy chain isoform 5A) at thePDBe-KB.
PDB gallery
  • 2kin: KINESIN (MONOMERIC) FROM RATTUS NORVEGICUS
    2kin: KINESIN (MONOMERIC) FROM RATTUS NORVEGICUS
  • 3kin: KINESIN (DIMERIC) FROM RATTUS NORVEGICUS
    3kin: KINESIN (DIMERIC) FROM RATTUS NORVEGICUS
Human
Microfilaments
andABPs
Myofilament
Actins
Myosins
Other
Other
Intermediate
filaments
Type 1/2
(Keratin,
Cytokeratin)
Epithelial keratins
(soft alpha-keratins)
Hair keratins
(hard alpha-keratins)
Ungrouped alpha
Not alpha
Type 3
Type 4
Type 5
Microtubules
andMAPs
Tubulins
MAPs
Kinesins
Dyneins
Microtubule organising proteins
Microtubule severing proteins
Other
Catenins
Membrane
Other
Nonhuman


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