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KCNMB2

From Wikipedia, the free encyclopedia
Protein-coding gene in the species Homo sapiens
KCNMB2
Available structures
PDBOrtholog search:PDBeRCSB
List of PDB id codes

1JO6

Identifiers
AliasesKCNMB2, potassium calcium-activated channel subfamily M regulatory beta subunit 2
External IDsOMIM:605214;MGI:1919663;HomoloGene:4257;GeneCards:KCNMB2;OMA:KCNMB2 - orthologs
Gene location (Human)
Chromosome 3 (human)
Chr.Chromosome 3 (human)[1]
Chromosome 3 (human)
Genomic location for KCNMB2
Genomic location for KCNMB2
Band3q26.32Start178,272,932bp[1]
End178,844,429bp[1]
Gene location (Mouse)
Chromosome 3 (mouse)
Chr.Chromosome 3 (mouse)[2]
Chromosome 3 (mouse)
Genomic location for KCNMB2
Genomic location for KCNMB2
Band3|3 A3Start31,956,656bp[2]
End32,254,329bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • islet of Langerhans

  • right uterine tube

  • testicle

  • bronchial epithelial cell

  • caput epididymis

  • corpus epididymis

  • cingulate gyrus

  • anterior cingulate cortex

  • prefrontal cortex

  • left ovary
Top expressed in
  • trigeminal ganglion

  • islet of Langerhans

  • olfactory epithelium

  • superior cervical ganglion

  • secondary oocyte

  • carotid body

  • lumbar spinal ganglion

  • neural tube

  • primary oocyte

  • zygote
More reference expression data
BioGPS
More reference expression data
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo /QuickGO
Orthologs
SpeciesHumanMouse
Entrez

10242

72413

Ensembl

ENSG00000197584

ENSMUSG00000037610

UniProt

Q9Y691

Q9CZM9

RefSeq (mRNA)

NM_001278911
NM_005832
NM_181361

NM_028231

RefSeq (protein)

NP_001265840
NP_005823
NP_852006

NP_082507

Location (UCSC)Chr 3: 178.27 – 178.84 MbChr 3: 31.96 – 32.25 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse
Protein domain
KCNMB2, ball and chain domain
solution structure of the cytoplasmicn-terminus of the bk beta-subunit kcnmb2
Identifiers
SymbolKcnmB2_inactiv
PfamPF09303
InterProIPR015382
Available protein structures:
Pfam  structures /ECOD  
PDBRCSB PDB;PDBe;PDBj
PDBsumstructure summary

Calcium-activated potassium channel subunit beta-2 is aprotein that in humans is encoded by theKCNMB2gene.[5][6]

Big Potassium (BK) channels are large conductance, voltage and calcium-sensitivepotassium channels which are fundamental to the control of smooth muscle tone and neuronal excitability. BK channels can contain two distinct subunits: a pore-forming alpha subunit and a modulatory beta subunit. Each complete BK channel contains four copies of the pore-forming alpha subunit and up to four beta subunits. The protein encoded by the KCNMB2 gene is an auxiliary beta subunit which influences the calcium sensitivity of BK currents and, following activation of BK current, causes persistent inactivation. The subunit encoded by the KCNMB2 gene is expressed in various endocrine cells, including pancreas and adrenal chromaffin cells. It is also found in the brain, including the hippocampus. The KCNMB2 gene is homologous to three other genes found in mammalian genomes:KCNMB1 (found primarily in smooth muscle),KCNMB3, andKCNMB4 (the primary brain BK auxiliary subunit).[6]

Calcium-activated potassium channel subunit beta-2 comprises twodomains. AnN-terminalcytoplasmic domain, theball and chain domain, which is responsible for the fast inactivation of these channels,[7] and a C-terminalcalcium-activated potassium channel beta subunit domain. The N-terminal domain only occurs in calcium-activated potassium channel subunit beta-2, while the C-terminal domain is found in related proteins.

See also

[edit]

References

[edit]
  1. ^abcGRCh38: Ensembl release 89: ENSG00000197584Ensembl, May 2017
  2. ^abcGRCm38: Ensembl release 89: ENSMUSG00000037610Ensembl, May 2017
  3. ^"Human PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^"Mouse PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^Wallner M, Meera P, Toro L (May 1999)."Molecular basis of fast inactivation in voltage and Ca2+-activated K+ channels: a transmembrane beta-subunit homolog".Proc Natl Acad Sci U S A.96 (7):4137–42.Bibcode:1999PNAS...96.4137W.doi:10.1073/pnas.96.7.4137.PMC 22433.PMID 10097176.
  6. ^ab"Entrez Gene: KCNMB2 potassium large conductance calcium-activated channel, subfamily M, beta member 2".
  7. ^Bentrop D, Beyermann M, Wissmann R, Fakler B (November 2001)."NMR structure of the "ball-and-chain" domain of KCNMB2, the beta 2-subunit of large conductance Ca2+- and voltage-activated potassium channels".J. Biol. Chem.276 (45):42116–21.doi:10.1074/jbc.M107118200.PMID 11517232.

Further reading

[edit]

External links

[edit]

This article incorporates text from theUnited States National Library of Medicine, which is in thepublic domain.

PDB gallery
  • 1jo6: Solution structure of the cytoplasmic N-terminus of the BK beta-subunit KCNMB2
    1jo6: Solution structure of the cytoplasmic N-terminus of the BK beta-subunit KCNMB2
Ligand-gated
Voltage-gated
Constitutively active
Proton-gated
Voltage-gated
Calcium-activated
Inward-rectifier
Tandem pore domain
Voltage-gated
Miscellaneous
Cl:Chloride channel
H+:Proton channel
M+:CNG cation channel
M+:TRP cation channel
H2O (+solutes):Porin
Cytoplasm:Gap junction
By gating mechanism
Ion channel class
see alsodisorders
This article incorporates text from the public domainPfam andInterPro:IPR015382


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