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KCNJ3

From Wikipedia, the free encyclopedia
Protein-coding gene in the species Homo sapiens
KCNJ3
Available structures
PDBOrtholog search:PDBeRCSB
List of PDB id codes

1N9P,1U4E,2QKS,3K6N

Identifiers
AliasesKCNJ3, GIRK1, KGA, KIR3.1, potassium voltage-gated channel subfamily J member 3, potassium inwardly rectifying channel subfamily J member 3
External IDsOMIM:601534;MGI:104742;HomoloGene:1687;GeneCards:KCNJ3;OMA:KCNJ3 - orthologs
Gene location (Human)
Chromosome 2 (human)
Chr.Chromosome 2 (human)[1]
Chromosome 2 (human)
Genomic location for KCNJ3
Genomic location for KCNJ3
Band2q24.1Start154,697,855bp[1]
End154,858,354bp[1]
Gene location (Mouse)
Chromosome 2 (mouse)
Chr.Chromosome 2 (mouse)[2]
Chromosome 2 (mouse)
Genomic location for KCNJ3
Genomic location for KCNJ3
Band2|2 C1.1Start55,435,970bp[2]
End55,598,145bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • endothelial cell

  • Brodmann area 23

  • middle temporal gyrus

  • cerebellar cortex

  • cerebellar hemisphere

  • cerebellar vermis

  • postcentral gyrus

  • right hemisphere of cerebellum

  • primary visual cortex

  • superior frontal gyrus
Top expressed in
  • lobe of cerebellum

  • lateral geniculate nucleus

  • dentate gyrus of hippocampal formation granule cell

  • cerebellar vermis

  • superior frontal gyrus

  • subiculum

  • medial geniculate nucleus

  • medial dorsal nucleus

  • atrium

  • lateral septal nucleus
More reference expression data
BioGPS


More reference expression data
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo /QuickGO
Orthologs
SpeciesHumanMouse
Entrez

3760

16519

Ensembl

ENSG00000162989

ENSMUSG00000026824

UniProt

P48549

P63250

RefSeq (mRNA)

NM_002239
NM_001260508
NM_001260509
NM_001260510

NM_008426
NM_001304810
NM_001355118

RefSeq (protein)

NP_001247437
NP_001247438
NP_001247439
NP_002230

NP_001291739
NP_032452
NP_001342047

Location (UCSC)Chr 2: 154.7 – 154.86 MbChr 2: 55.44 – 55.6 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

G protein-activated inward rectifier potassium channel 1(GIRK-1) is encoded in the human by the geneKCNJ3.[5]

Potassium channels are present in most mammalian cells, where they participate in a wide range of physiologic responses. The protein encoded by this gene is an integral membrane protein and inward-rectifier type potassium channel. The encoded protein, which has a greater tendency to allow potassium to flow into a cell rather than out of a cell, is controlled by G-proteins and plays an important role in regulating heartbeat. It associates with three other G-protein-activated potassium channels to form a hetero-tetrameric pore-forming complex.[5]

Interactions

[edit]

KCNJ3 has been shown tointeract withKCNJ5.[6][7]

See also

[edit]

References

[edit]
  1. ^abcGRCh38: Ensembl release 89: ENSG00000162989Ensembl, May 2017
  2. ^abcGRCm38: Ensembl release 89: ENSMUSG00000026824Ensembl, May 2017
  3. ^"Human PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^"Mouse PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ab"Entrez Gene: KCNJ3 potassium inwardly-rectifying channel, subfamily J, member 3".
  6. ^Huang, C L; Jan Y N; Jan L Y (Apr 1997). "Binding of the G protein betagamma subunit to multiple regions of G protein-gated inward-rectifying K+ channels".FEBS Lett.405 (3):291–8.Bibcode:1997FEBSL.405..291H.doi:10.1016/S0014-5793(97)00197-X.ISSN 0014-5793.PMID 9108307.S2CID 44072628.
  7. ^He, Cheng; Yan Xixin; Zhang Hailin; Mirshahi Tooraj; Jin Taihao; Huang Aijun; Logothetis Diomedes E (Feb 2002)."Identification of critical residues controlling G protein-gated inwardly rectifying K(+) channel activity through interactions with the beta gamma subunits of G proteins".J. Biol. Chem.277 (8):6088–96.doi:10.1074/jbc.M104851200.ISSN 0021-9258.PMID 11741896.

Further reading

[edit]

External links

[edit]

This article incorporates text from theUnited States National Library of Medicine, which is in thepublic domain.

PDB gallery
  • 1n9p: Crystal Structure of the Cytoplasmic Domain of G-protein Activated Inward Rectifier Potassium Channel 1
    1n9p: Crystal Structure of the Cytoplasmic Domain of G-protein Activated Inward Rectifier Potassium Channel 1
  • 1u4e: Crystal Structure of Cytoplasmic Domains of GIRK1 channel
    1u4e: Crystal Structure of Cytoplasmic Domains of GIRK1 channel
Ligand-gated
Voltage-gated
Constitutively active
Proton-gated
Voltage-gated
Calcium-activated
Inward-rectifier
Tandem pore domain
Voltage-gated
Miscellaneous
Cl:Chloride channel
H+:Proton channel
M+:CNG cation channel
M+:TRP cation channel
H2O (+solutes):Porin
Cytoplasm:Gap junction
By gating mechanism
Ion channel class
see alsodisorders
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