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HSF2

From Wikipedia, the free encyclopedia
Protein-coding gene in the species Homo sapiens

HSF2
Available structures
PDBOrtholog search:PDBeRCSB
List of PDB id codes

5D8K,5D8L

Identifiers
AliasesHSF2, HSF 2, HSTF 2, heat shock transcription factor 2
External IDsOMIM:140581;MGI:96239;HomoloGene:37931;GeneCards:HSF2;OMA:HSF2 - orthologs
Gene location (Human)
Chromosome 6 (human)
Chr.Chromosome 6 (human)[1]
Chromosome 6 (human)
Genomic location for HSF2
Genomic location for HSF2
Band6q22.31Start122,399,551bp[1]
End122,433,119bp[1]
Gene location (Mouse)
Chromosome 10 (mouse)
Chr.Chromosome 10 (mouse)[2]
Chromosome 10 (mouse)
Genomic location for HSF2
Genomic location for HSF2
Band10|10 B4Start57,362,481bp[2]
End57,389,231bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • testicle

  • Skeletal muscle tissue of biceps brachii

  • muscle of leg

  • gastrocnemius muscle

  • muscle of thigh

  • ganglionic eminence

  • gonad

  • Skeletal muscle tissue of rectus abdominis

  • Achilles tendon

  • bronchial epithelial cell
Top expressed in
  • spermatid

  • genital tubercle

  • tail of embryo

  • ventricular zone

  • muscle of thigh

  • neural layer of retina

  • morula

  • spermatocyte

  • embryo

  • superior frontal gyrus
More reference expression data
BioGPS


More reference expression data
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo /QuickGO
Orthologs
SpeciesHumanMouse
Entrez

3298

15500

Ensembl

ENSG00000025156

ENSMUSG00000019878

UniProt

Q03933
Q9BS48

P38533

RefSeq (mRNA)

NM_004506
NM_001135564
NM_001243094

NM_008297

RefSeq (protein)

NP_001129036
NP_001230023
NP_004497
NP_001230023.1

NP_032323

Location (UCSC)Chr 6: 122.4 – 122.43 MbChr 10: 57.36 – 57.39 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Heat shock factor protein 2 is aprotein that in humans is encoded by theHSF2gene.[5][6]

Function

[edit]

HSF2, as well as the related gene HSF1, encodes a protein that binds specifically to the heat-shock element and has homology to HSFs of other species. Heat shock transcription factors activate heat-shock response genes under conditions of heat or other stresses. Although the names HSF1 and HSF2 were chosen for historical reasons, these peptides should be referred to as heat-shock transcription factors.[6]

Interactions

[edit]

HSF2 has been shown tointeract withNucleoporin 62[7] andHSF1.[8]

See also

[edit]

References

[edit]
  1. ^abcGRCh38: Ensembl release 89: ENSG00000025156Ensembl, May 2017
  2. ^abcGRCm38: Ensembl release 89: ENSMUSG00000019878Ensembl, May 2017
  3. ^"Human PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^"Mouse PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^Schuetz TJ, Gallo GJ, Sheldon L, Tempst P, Kingston RE (Sep 1991)."Isolation of a cDNA for HSF2: evidence for two heat shock factor genes in humans".Proc Natl Acad Sci U S A.88 (16):6911–5.Bibcode:1991PNAS...88.6911S.doi:10.1073/pnas.88.16.6911.PMC 52203.PMID 1871106.
  6. ^ab"Entrez Gene: HSF2 heat shock transcription factor 2".
  7. ^Yoshima T, Yura T, Yanagi H (Nov 1997). "The trimerization domain of human heat shock factor 2 is able to interact with nucleoporin p62".Biochem. Biophys. Res. Commun.240 (1):228–33.Bibcode:1997BBRC..240..228Y.doi:10.1006/bbrc.1997.7662.PMID 9367915.
  8. ^He H, Soncin F, Grammatikakis N, Li Y, Siganou A, Gong J, Brown SA, Kingston RE, Calderwood SK (Sep 2003)."Elevated expression of heat shock factor (HSF) 2A stimulates HSF1-induced transcription during stress".J. Biol. Chem.278 (37):35465–75.doi:10.1074/jbc.M304663200.PMID 12813038.

Further reading

[edit]

External links

[edit]

This article incorporates text from theUnited States National Library of Medicine, which is in thepublic domain.

(1) Basic domains
(1.1) Basicleucine zipper (bZIP)
(1.2) Basic helix-loop-helix (bHLH)
Group A
Group B
Group C
bHLH-PAS
Group D
Group E
Group F
bHLH-COE
(1.3)bHLH-ZIP
(1.4) NF-1
(1.5) RF-X
(1.6) Basic helix-span-helix (bHSH)
(2)Zinc finger DNA-binding domains
(2.1)Nuclear receptor(Cys4)
subfamily 1
subfamily 2
subfamily 3
subfamily 4
subfamily 5
subfamily 6
subfamily 0
(2.2) Other Cys4
(2.3) Cys2His2
(2.4) Cys6
(2.5) Alternating composition
(2.6) WRKY
(3.1)Homeodomain
Antennapedia
ANTP class
protoHOX
Hox-like
metaHOX
NK-like
other
(3.2) Paired box
(3.3)Fork head /winged helix
(3.4)Heat shock factors
(3.5) Tryptophan clusters
(3.6) TEA domain
  • transcriptional enhancer factor
(4)β-Scaffold factors with minor groove contacts
(4.1)Rel homology region
(4.2)STAT
(4.3) p53-like
(4.4)MADS box
(4.6)TATA-binding proteins
(4.7)High-mobility group
(4.9) Grainyhead
(4.10) Cold-shock domain
(4.11) Runt
(0) Other transcription factors
(0.2) HMGI(Y)
(0.3)Pocket domain
(0.5)AP-2/EREBP-related factors
(0.6) Miscellaneous


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