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HOXB6

From Wikipedia, the free encyclopedia
Protein-coding gene in the species Homo sapiens
HOXB6
Identifiers
AliasesHOXB6, HOX2, HOX2B, HU-2, Hox-2.2, homeobox B6
External IDsOMIM:142961;MGI:96187;HomoloGene:7366;GeneCards:HOXB6;OMA:HOXB6 - orthologs
Gene location (Human)
Chromosome 17 (human)
Chr.Chromosome 17 (human)[1]
Chromosome 17 (human)
Genomic location for HOXB6
Genomic location for HOXB6
Band17q21.32Start48,595,751bp[1]
End48,604,992bp[1]
Gene location (Mouse)
Chromosome 11 (mouse)
Chr.Chromosome 11 (mouse)[2]
Chromosome 11 (mouse)
Genomic location for HOXB6
Genomic location for HOXB6
Band11 D|11 59.82 cMStart96,183,302bp[2]
End96,192,395bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • corpus epididymis

  • seminal vesicula

  • caput epididymis

  • right uterine tube

  • transverse colon

  • mucosa of transverse colon

  • tail of epididymis

  • human kidney

  • renal medulla

  • endometrium
Top expressed in
  • thoracic vertebral column

  • seminal vesicula

  • lumbar subsegment of spinal cord

  • tail of embryo

  • adrenal gland

  • allantois

  • anterior horn of spinal cord

  • inner renal medulla

  • right kidney

  • renal cortex
More reference expression data
BioGPS
More reference expression data
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo /QuickGO
Orthologs
SpeciesHumanMouse
Entrez

3216

15414

Ensembl

ENSG00000108511

ENSMUSG00000000690

UniProt

P17509

P09023

RefSeq (mRNA)

NM_018952
NM_156036
NM_156037
NM_001369397

NM_008269

RefSeq (protein)

NP_061825
NP_001356326

NP_032295

Location (UCSC)Chr 17: 48.6 – 48.6 MbChr 11: 96.18 – 96.19 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Homeobox protein Hox-B6 is aprotein that in humans is encoded by theHOXB6gene.[5][6][7]

Function

[edit]

This gene is a member of theAntphomeobox family and encodes a protein with a homeoboxDNA-binding domain. It is included in acluster of homeobox B genes located onchromosome 17. The encoded protein functions as a sequence-specifictranscription factor that is involved in development, including that of lung and skin, and has been localized to both thenucleus andcytoplasm. Alteredexpression of this gene or a change in the subcellular localization of its protein is associated with some cases ofacute myeloid leukemia andcolorectal cancer.[7]

During development

[edit]

HOXB6 gene is only expressed inerythroid progenitor cells, which are the precursor tored blood cells used for transport of oxygen and carbon dioxide throughout the body. During development, the formation of the HOX gene factor happens in the first stages offetal development, namely soon after the establishment of themesoderm, which is the “middle layer” of the future embryo. However, HOXB6 is only expressed once the undifferentiatedstem cells of the embryo distinguish themselves into the erythpoietic phase. The research has shown that HOXB6 is not expressed inhematopoietic stem cells located in thered bone marrow, which are the precursor cells to all types of blood cells, orprimordial germ cells (PGCs), the precursor to cells passed on in each generation.[8] Since it is a transcriptional factor, HOXB6 regulateserythropoiesis (red blood cell formation) using mRNA as the basis for certain protein productions. The specific gene factor for erythrogenesis has relatively been unobserved in the scientific community, and no known diseases have been associated with a defect HOXB6 gene. However, it has been shown in correlation with major skeletal deformations.[9]

HOXB6 is a structural protein that has been shown to influence the growth and differentiation of the different blood lineages. This gene has also been shown to encourage the growth ofgranulocytes andmonocytes, but at the cost of other blood cells. HOXB6 has the ability to cause the indefinite proliferation of murine marrow cells, as well as expand hematopoietic stem cells. When expressed abnormally, HOXB6 displays many characteristics of a potentoncoprotein. An oncoprotein can cause the transformation of a normal cell into a tumor cell. Overexpression of HOXB6, along with the addition ofMEIS1 protein, has been implicated in the development of acute myeloid leukemia (AML). Acute myeloid leukemia is a cancer of the blood cells, specifically theleukocytes. The chromosomal irregularity most frequently seen in HOXB6 AML is a reappearinginterstitial deletion of chromosome 2. Fundamental HOXB6 expression stops myeloid differentiation and debilitates erythropoiesis,megakaryopoiesis, andlymphopoiesis.[10]

See also

[edit]

References

[edit]
  1. ^abcGRCh38: Ensembl release 89: ENSG00000108511Ensembl, May 2017
  2. ^abcGRCm38: Ensembl release 89: ENSMUSG00000000690Ensembl, May 2017
  3. ^"Human PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^"Mouse PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^McAlpine PJ, Shows TB (Jul 1990). "Nomenclature for human homeobox genes".Genomics.7 (3): 460.doi:10.1016/0888-7543(90)90186-X.PMID 1973146.
  6. ^Scott MP (Nov 1992). "Vertebrate homeobox gene nomenclature".Cell.71 (4):551–3.doi:10.1016/0092-8674(92)90588-4.PMID 1358459.S2CID 13370372.
  7. ^ab"Entrez Gene: HOXB6 homeobox B6".
  8. ^Zimmermann F, Rich IN (Apr 1997)."Mammalian homeobox B6 expression can be correlated with erythropoietin production sites and erythropoiesis during development, but not with hematopoietic or nonhematopoietic stem cell populations".Blood.89 (8):2723–35.doi:10.1182/blood.V89.8.2723.PMID 9108390.
  9. ^Rancourt DE, Tsuzuki T, Capecchi MR (Jan 1995)."Genetic interaction between hoxb-5 and hoxb-6 is revealed by nonallelic noncomplementation".Genes & Development.9 (1):108–22.doi:10.1101/gad.9.1.108.PMID 7828847.
  10. ^Fischbach NA, Rozenfeld S, Shen W, Fong S, Chrobak D, Ginzinger D, Kogan SC, Radhakrishnan A, Le Beau MM, Largman C, Lawrence HJ (2005)."HOXB6 overexpression in murine bone marrow immortalizes a myelomonocytic precursor in vitro and causes hematopoietic stem cell expansion and acute myeloid leukemia in vivo".Blood.105 (4):1456–66.doi:10.1182/blood-2004-04-1583.PMID 15522959.

Further reading

[edit]

External links

[edit]

This article incorporates text from theUnited States National Library of Medicine, which is in thepublic domain.


PDB gallery
  • 1ahd: DETERMINATION OF THE NMR SOLUTION STRUCTURE OF AN ANTENNAPEDIA HOMEODOMAIN-DNA COMPLEX
    1ahd: DETERMINATION OF THE NMR SOLUTION STRUCTURE OF AN ANTENNAPEDIA HOMEODOMAIN-DNA COMPLEX
  • 1hom: DETERMINATION OF THE THREE-DIMENSIONAL STRUCTURE OF THE ANTENNAPEDIA HOMEODOMAIN FROM DROSOPHILA IN SOLUTION BY 1H NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY
    1hom: DETERMINATION OF THE THREE-DIMENSIONAL STRUCTURE OF THE ANTENNAPEDIA HOMEODOMAIN FROM DROSOPHILA IN SOLUTION BY 1H NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY
  • 1san: THE DES(1-6)ANTENNAPEDIA HOMEODOMAIN: COMPARISON OF THE NMR SOLUTION STRUCTURE AND THE DNA BINDING AFFINITY WITH THE INTACT ANTENNAPEDIA HOMEODOMAIN
    1san: THE DES(1-6)ANTENNAPEDIA HOMEODOMAIN: COMPARISON OF THE NMR SOLUTION STRUCTURE AND THE DNA BINDING AFFINITY WITH THE INTACT ANTENNAPEDIA HOMEODOMAIN
  • 2hoa: STRUCTURE DETERMINATION OF THE ANTP(C39->S) HOMEODOMAIN FROM NUCLEAR MAGNETIC RESONANCE DATA IN SOLUTION USING A NOVEL STRATEGY FOR THE STRUCTURE CALCULATION WITH THE PROGRAMS DIANA, CALIBA, HABAS AND GLOMSA
    2hoa: STRUCTURE DETERMINATION OF THE ANTP(C39->S) HOMEODOMAIN FROM NUCLEAR MAGNETIC RESONANCE DATA IN SOLUTION USING A NOVEL STRATEGY FOR THE STRUCTURE CALCULATION WITH THE PROGRAMS DIANA, CALIBA, HABAS AND GLOMSA
  • 9ant: ANTENNAPEDIA HOMEODOMAIN-DNA COMPLEX
    9ant: ANTENNAPEDIA HOMEODOMAIN-DNA COMPLEX
(1) Basic domains
(1.1) Basicleucine zipper (bZIP)
(1.2) Basic helix-loop-helix (bHLH)
Group A
Group B
Group C
bHLH-PAS
Group D
Group E
Group F
bHLH-COE
(1.3)bHLH-ZIP
(1.4) NF-1
(1.5) RF-X
(1.6) Basic helix-span-helix (bHSH)
(2)Zinc finger DNA-binding domains
(2.1)Nuclear receptor(Cys4)
subfamily 1
subfamily 2
subfamily 3
subfamily 4
subfamily 5
subfamily 6
subfamily 0
(2.2) Other Cys4
(2.3) Cys2His2
(2.4) Cys6
(2.5) Alternating composition
(2.6) WRKY
(3.1)Homeodomain
Antennapedia
ANTP class
protoHOX
Hox-like
metaHOX
NK-like
other
(3.2) Paired box
(3.3)Fork head /winged helix
(3.4)Heat shock factors
(3.5) Tryptophan clusters
(3.6) TEA domain
  • transcriptional enhancer factor
(4)β-Scaffold factors with minor groove contacts
(4.1)Rel homology region
(4.2)STAT
(4.3) p53-like
(4.4)MADS box
(4.6)TATA-binding proteins
(4.7)High-mobility group
(4.9) Grainyhead
(4.10) Cold-shock domain
(4.11) Runt
(0) Other transcription factors
(0.2) HMGI(Y)
(0.3)Pocket domain
(0.5)AP-2/EREBP-related factors
(0.6) Miscellaneous
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