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HOXA11

From Wikipedia, the free encyclopedia
Protein-coding gene in the species Homo sapiens

HOXA11
Identifiers
AliasesHOXA11, HOX1, HOX1I, RUSAT1, homeobox A11
External IDsOMIM:142958;MGI:96172;HomoloGene:4033;GeneCards:HOXA11;OMA:HOXA11 - orthologs
Gene location (Human)
Chromosome 7 (human)
Chr.Chromosome 7 (human)[1]
Chromosome 7 (human)
Genomic location for HOXA11
Genomic location for HOXA11
Band7p15.2Start27,181,157bp[1]
End27,185,232bp[1]
Gene location (Mouse)
Chromosome 6 (mouse)
Chr.Chromosome 6 (mouse)[2]
Chromosome 6 (mouse)
Genomic location for HOXA11
Genomic location for HOXA11
Band6 B3|6 25.4 cMStart52,219,086bp[2]
End52,222,790bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • body of uterus

  • myometrium

  • canal of the cervix

  • stromal cell of endometrium

  • ectocervix

  • muscle layer of sigmoid colon

  • tibial arteries

  • transverse colon

  • prostate

  • urinary bladder
Top expressed in
  • gastrula

  • decidua

  • tail of embryo

  • uterus

  • vas deferens

  • elbow

  • lumbar subsegment of spinal cord

  • blastocyst

  • transitional epithelium of urinary bladder

  • ankle joint
More reference expression data
BioGPS


More reference expression data
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo /QuickGO
Orthologs
SpeciesHumanMouse
Entrez

3207

15396

Ensembl

ENSG00000005073

ENSMUSG00000038210

UniProt

P31270

P31311

RefSeq (mRNA)

NM_005523

NM_010450

RefSeq (protein)

NP_005514

NP_034580

Location (UCSC)Chr 7: 27.18 – 27.19 MbChr 6: 52.22 – 52.22 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Homeobox protein Hox-A11 is aprotein that in humans is encoded by theHOXA11gene.[5][6][7]

Function

[edit]

In vertebrates, the genes encoding the class of transcription factors calledhomeobox genes are found in clusters named A, B, C, and D on four separate chromosomes. Expression of these proteins is spatially and temporally regulated during embryonic development. This gene is part of the A cluster onchromosome 7 and encodes a DNA-binding transcription factor which may regulate gene expression, morphogenesis, and differentiation. This gene is involved in the regulation of uterine development and is required for female fertility. Mutations in this gene can causeradioulnar synostosis withamegakaryocytic thrombocytopenia.[7]

See also

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References

[edit]
  1. ^abcGRCh38: Ensembl release 89: ENSG00000005073Ensembl, May 2017
  2. ^abcGRCm38: Ensembl release 89: ENSMUSG00000038210Ensembl, May 2017
  3. ^"Human PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^"Mouse PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^McAlpine PJ, Shows TB (Jul 1990). "Nomenclature for human homeobox genes".Genomics.7 (3): 460.doi:10.1016/0888-7543(90)90186-X.PMID 1973146.
  6. ^Scott MP (Nov 1992). "Vertebrate homeobox gene nomenclature".Cell.71 (4):551–3.doi:10.1016/0092-8674(92)90588-4.PMID 1358459.S2CID 13370372.
  7. ^ab"Entrez Gene: HOXA11 homeobox A11".

Further reading

[edit]

External links

[edit]

This article incorporates text from theUnited States National Library of Medicine, which is in thepublic domain.


(1) Basic domains
(1.1) Basicleucine zipper (bZIP)
(1.2) Basic helix-loop-helix (bHLH)
Group A
Group B
Group C
bHLH-PAS
Group D
Group E
Group F
bHLH-COE
(1.3)bHLH-ZIP
(1.4) NF-1
(1.5) RF-X
(1.6) Basic helix-span-helix (bHSH)
(2)Zinc finger DNA-binding domains
(2.1)Nuclear receptor(Cys4)
subfamily 1
subfamily 2
subfamily 3
subfamily 4
subfamily 5
subfamily 6
subfamily 0
(2.2) Other Cys4
(2.3) Cys2His2
(2.4) Cys6
(2.5) Alternating composition
(2.6) WRKY
(3.1)Homeodomain
Antennapedia
ANTP class
protoHOX
Hox-like
metaHOX
NK-like
other
(3.2) Paired box
(3.3)Fork head /winged helix
(3.4)Heat shock factors
(3.5) Tryptophan clusters
(3.6) TEA domain
  • transcriptional enhancer factor
(4)β-Scaffold factors with minor groove contacts
(4.1)Rel homology region
(4.2)STAT
(4.3) p53-like
(4.4)MADS box
(4.6)TATA-binding proteins
(4.7)High-mobility group
(4.9) Grainyhead
(4.10) Cold-shock domain
(4.11) Runt
(0) Other transcription factors
(0.2) HMGI(Y)
(0.3)Pocket domain
(0.5)AP-2/EREBP-related factors
(0.6) Miscellaneous


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