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Gcn4

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Fungal protein found in Saccharomyces cerevisiae S288c
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(February 2016)

Gcn4 is atranscription factor and a “master regulator” for gene expression which regulates close to one tenth of the yeast genome.In a study by Razaghi et al,[1] amino acid starvation activated the transcription factor Gcn4p, resulting in transcriptional induction of almost all genes involved in amino acid biosynthesis, includingHIS4. Thus involvement of Gcn4 in regulation of bothhistidinol dehydrogenaseHIS4 andinterferon gammahIFNγ was hypothesised as a scenario explaining the increased level ofhIFNγ under amino acid starvation.[1]

Overexpression of Gcn4 leads to the reduction in protein synthesis capacity which contributes to Gcn4-mediated increase of yeast lifespan.[2]

In budding yeast, deletion of Gcn4 preventsHIS4 from targeting to the nuclear periphery upon transcriptional activation, indicating that Gcn4 is necessary for regulation of gene positioning and transcription.[3]

See also

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References

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  1. ^abRazaghi, Ali; Huerlimann, Roger; Owens, Leigh; Heimann, Kirsten (1 December 2015)."Increased expression and secretion of recombinant hIFNγ through amino acid starvation-induced selective pressure on the adjacent HIS4 gene in Pichia pastoris".Acta Facultatis Pharmaceuticae Universitatis Comenianae.62 (2):43–50.doi:10.1515/afpuc-2015-0031.
  2. ^Mittal, Nitish; Guimaraes, Joao C.; Gross, Thomas; Schmidt, Alexander; Vina-Vilaseca, Arnau; Nedialkova, Danny D.; Aeschimann, Florian; Leidel, Sebastian A.; Spang, Anne; Zavolan, Mihaela (2017)."The Gcn4 transcription factor reduces protein synthesis capacity and extends yeast lifespan".Nature Communications.8 (1): 457.Bibcode:2017NatCo...8..457M.doi:10.1038/s41467-017-00539-y.PMC 5587724.PMID 28878244.
  3. ^Randise-Hinchliff, Carlo; Brickner, Jason H. (2016)."Transcription factors dynamically control the spatial organization of the yeast genome".Nucleus.7 (4):369–374.doi:10.1080/19491034.2016.1212797.PMC 5039007.PMID 27442220.
(1) Basic domains
(1.1) Basicleucine zipper (bZIP)
(1.2) Basic helix-loop-helix (bHLH)
Group A
Group B
Group C
bHLH-PAS
Group D
Group E
Group F
bHLH-COE
(1.3)bHLH-ZIP
(1.4) NF-1
(1.5) RF-X
(1.6) Basic helix-span-helix (bHSH)
(2)Zinc finger DNA-binding domains
(2.1)Nuclear receptor(Cys4)
subfamily 1
subfamily 2
subfamily 3
subfamily 4
subfamily 5
subfamily 6
subfamily 0
(2.2) Other Cys4
(2.3) Cys2His2
(2.4) Cys6
(2.5) Alternating composition
(2.6) WRKY
(3.1)Homeodomain
Antennapedia
ANTP class
protoHOX
Hox-like
metaHOX
NK-like
other
(3.2) Paired box
(3.3)Fork head /winged helix
(3.4)Heat shock factors
(3.5) Tryptophan clusters
(3.6) TEA domain
  • transcriptional enhancer factor
(4)β-Scaffold factors with minor groove contacts
(4.1)Rel homology region
(4.2)STAT
(4.3) p53-like
(4.4)MADS box
(4.6)TATA-binding proteins
(4.7)High-mobility group
(4.9) Grainyhead
(4.10) Cold-shock domain
(4.11) Runt
(0) Other transcription factors
(0.2) HMGI(Y)
(0.3)Pocket domain
(0.5)AP-2/EREBP-related factors
(0.6) Miscellaneous
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