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GTF3A

From Wikipedia, the free encyclopedia
Protein-coding gene in the species Homo sapiens
GTF3A
Identifiers
AliasesGTF3A, AP2, TFIIIA, general transcription factor IIIA
External IDsOMIM:600860;MGI:1913846;HomoloGene:55630;GeneCards:GTF3A;OMA:GTF3A - orthologs
Gene location (Human)
Chromosome 13 (human)
Chr.Chromosome 13 (human)[1]
Chromosome 13 (human)
Genomic location for GTF3A
Genomic location for GTF3A
Band13q12.2Start27,424,619bp[1]
End27,435,823bp[1]
Gene location (Mouse)
Chromosome 5 (mouse)
Chr.Chromosome 5 (mouse)[2]
Chromosome 5 (mouse)
Genomic location for GTF3A
Genomic location for GTF3A
Band5|5 G3Start146,885,467bp[2]
End146,892,424bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • parotid gland

  • glutes

  • right ventricle

  • middle temporal gyrus

  • apex of heart

  • biceps brachii

  • thoracic diaphragm

  • palpebral conjunctiva

  • body of tongue

  • Skeletal muscle tissue of biceps brachii
Top expressed in
  • otic placode

  • saccule

  • otic vesicle

  • abdominal wall

  • embryo

  • tail of embryo

  • epiblast

  • primitive streak

  • neural tube

  • renal corpuscle
More reference expression data
BioGPS
n/a
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo /QuickGO
Orthologs
SpeciesHumanMouse
Entrez

2971

66596

Ensembl

ENSG00000122034

ENSMUSG00000016503

UniProt

Q92664

Q8VHT7

RefSeq (mRNA)

NM_002097

NM_025652

RefSeq (protein)

NP_002088

NP_079928

Location (UCSC)Chr 13: 27.42 – 27.44 MbChr 5: 146.89 – 146.89 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Transcription factor IIIA is aprotein that in humans is encoded by theGTF3Agene.[5][6]

It was first purified and identified as the first mammalian gene-specific activator byRobert G. Roeder in 1980,[7] and later characterized by Wolffe and Brown in 1988.

The TFIIIA inXenopus was the firstzinc finger protein discovered.[8]

References

[edit]
  1. ^abcGRCh38: Ensembl release 89: ENSG00000122034Ensembl, May 2017
  2. ^abcGRCm38: Ensembl release 89: ENSMUSG00000016503Ensembl, May 2017
  3. ^"Human PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^"Mouse PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^Arakawa H, Nagase H, Hayashi N, Ogawa M, Nagata M, Fujiwara T, et al. (Jul 1995). "Molecular cloning, characterization, and chromosomal mapping of a novel human gene (GTF3A) that is highly homologous to Xenopus transcription factor IIIA".Cytogenetics and Cell Genetics.70 (3–4):235–8.doi:10.1159/000134041.PMID 7789179.
  6. ^"Entrez Gene: GTF3A general transcription factor IIIA".
  7. ^Engelke DR, Ng SY, Shastry BS, Roeder RG (Mar 1980). "Specific interaction of a purified transcription factor with an internal control region of 5S RNA genes".Cell.19 (3):717–28.doi:10.1016/S0092-8674(80)80048-1.PMID 6153931.S2CID 23955175.
  8. ^Bruno M, Mahgoub M, Macfarlan TS (December 2019). "The Arms Race Between KRAB-Zinc Finger Proteins and Endogenous Retroelements and Its Impact on Mammals".Annual Review of Genetics.53 (1).Annual Reviews:393–416.doi:10.1146/annurev-genet-112618-043717.PMID 31518518.S2CID 202572327.

Further reading

[edit]

External links

[edit]

This article incorporates text from theUnited States National Library of Medicine, which is in thepublic domain.

(1) Basic domains
(1.1) Basicleucine zipper (bZIP)
(1.2) Basic helix-loop-helix (bHLH)
Group A
Group B
Group C
bHLH-PAS
Group D
Group E
Group F
bHLH-COE
(1.3)bHLH-ZIP
(1.4) NF-1
(1.5) RF-X
(1.6) Basic helix-span-helix (bHSH)
(2)Zinc finger DNA-binding domains
(2.1)Nuclear receptor(Cys4)
subfamily 1
subfamily 2
subfamily 3
subfamily 4
subfamily 5
subfamily 6
subfamily 0
(2.2) Other Cys4
(2.3) Cys2His2
(2.4) Cys6
(2.5) Alternating composition
(2.6) WRKY
(3.1)Homeodomain
Antennapedia
ANTP class
protoHOX
Hox-like
metaHOX
NK-like
other
(3.2) Paired box
(3.3)Fork head /winged helix
(3.4)Heat shock factors
(3.5) Tryptophan clusters
(3.6) TEA domain
  • transcriptional enhancer factor
(4)β-Scaffold factors with minor groove contacts
(4.1)Rel homology region
(4.2)STAT
(4.3) p53-like
(4.4)MADS box
(4.6)TATA-binding proteins
(4.7)High-mobility group
(4.9) Grainyhead
(4.10) Cold-shock domain
(4.11) Runt
(0) Other transcription factors
(0.2) HMGI(Y)
(0.3)Pocket domain
(0.5)AP-2/EREBP-related factors
(0.6) Miscellaneous
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