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FOXC2

From Wikipedia, the free encyclopedia

Protein-coding gene in the species Homo sapiens
FOXC2
Available structures
PDBOrtholog search:PDBeRCSB
List of PDB id codes

1D5V

Identifiers
AliasesFOXC2, FKHL14, LD, MFH-1, MFH1, forkhead box C2
External IDsOMIM:602402;MGI:1347481;HomoloGene:21091;GeneCards:FOXC2;OMA:FOXC2 - orthologs
Gene location (Human)
Chromosome 16 (human)
Chr.Chromosome 16 (human)[1]
Chromosome 16 (human)
Genomic location for FOXC2
Genomic location for FOXC2
Band16q24.1Start86,566,829bp[1]
End86,569,728bp[1]
Gene location (Mouse)
Chromosome 8 (mouse)
Chr.Chromosome 8 (mouse)[2]
Chromosome 8 (mouse)
Genomic location for FOXC2
Genomic location for FOXC2
Band8 E1|8 70.33 cMStart121,842,910bp[2]
End121,845,634bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • vena cava

  • palpebral conjunctiva

  • popliteal artery

  • trigeminal ganglion

  • tibial arteries

  • urethra

  • ascending aorta

  • spinal ganglia

  • Descending thoracic aorta

  • cardiac muscle tissue of right atrium
Top expressed in
  • aortic arches

  • ascending aorta

  • fifth metatarsal bone

  • renal corpuscle

  • optic nerve

  • aortic valve

  • fourth metatarsal bone

  • somite

  • sclerotome

  • lumbar spinal ganglion
More reference expression data
BioGPS
n/a
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo /QuickGO
Orthologs
SpeciesHumanMouse
Entrez

2303

14234

Ensembl

ENSG00000176692

ENSMUSG00000046714

UniProt

Q99958

Q61850

RefSeq (mRNA)

NM_005251

NM_013519

RefSeq (protein)

NP_005242

NP_038547

Location (UCSC)Chr 16: 86.57 – 86.57 MbChr 8: 121.84 – 121.85 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Forkhead box protein C2 (FOXC2) also known asforkhead-related protein FKHL14 (FKHL14),transcription factor FKH-14, ormesenchyme fork head protein 1 (MFH1) is aprotein that in humans is encoded by theFOXC2gene.[5][6] FOXC2 is a member of thefork head box (FOX) family oftranscription factors.

Structure and function

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The protein is 501 amino acids in length. The gene has nointrons; the singleexon is approximately 1.5kb in size.[6][7]

FOX transcription factors are expressed during development and are associated with a number of cellular and developmentaldifferentiation processes. FOXC2 is required during early development of the kidneys, including differentiation ofpodocytes and maturation of theglomerular basement membrane. It is also involved in the early development of the heart.[8]

An increased expression of FOXC2 in adipocytes can increase the amount of brown adipose tissue leading to lower weight and an increased sensitivity to insulin.[9][10]

Role in disease

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Absence of FOXC2 has been shown to lead to the failure of lymphatic valves to form and problems with lymphatic remodelling. A number of mutations in the FOXC2 gene have been associated withLymphedema–distichiasis syndrome,[11][12] It has also been suggested that there may be a link between polymorphisms in FOXC2 and varicose veins.[12][13]

FOXC2 is also involved incancermetastases. In particular, expression of FOXC2 is induced whenepithelial cells undergo anepithelial-mesenchymal transition (EMT) and becomemesenchymal looking cells. EMT can be induced by a number of genes includingSnail,Twist,Goosecoid, andTGF-beta 1.[14] Overexpression of FOXC2 has been noted in subtypes of breast cancer which are highly metastatic.[8] Suppression of FOXC2 expression usingshRNA in a highly metastaticbreast cancer model blocks their metastatic ability.[15]

References

[edit]
  1. ^abcGRCh38: Ensembl release 89: ENSG00000176692Ensembl, May 2017
  2. ^abcGRCm38: Ensembl release 89: ENSMUSG00000046714Ensembl, May 2017
  3. ^"Human PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^"Mouse PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^Kaestner KH, Bleckmann SC, Monaghan AP, Schlöndorff J, Mincheva A, Lichter P, Schütz G (June 1996). "Clustered arrangement of winged helix genes fkh-6 and MFH-1: possible implications for mesoderm development".Development.122 (6):1751–8.doi:10.1242/dev.122.6.1751.PMID 8674414.
  6. ^abMiura N, Iida K, Kakinuma H, Yang XL, Sugiyama T (May 1997). "Isolation of the mouse (MFH-1) and human (FKHL 14) mesenchyme fork head-1 genes reveals conservation of their gene and protein structures".Genomics.41 (3):489–92.doi:10.1006/geno.1997.4695.PMID 9169153.
  7. ^Fang J, Dagenais SL, Erickson RP, Arlt MF, Glynn MW, Gorski JL, Seaver LH, Glover TW (Dec 2000)."Mutations in FOXC2 (MFH-1), a forkhead family transcription factor, are responsible for the hereditary lymphedema-distichiasis syndrome".Am J Hum Genet.67 (6):1382–8.doi:10.1086/316915.PMC 1287915.PMID 11078474.
  8. ^abHader C, Marlier A, Cantley L (2010)."Mesenchymal-epithelial transition in epithelial response to injury: the role of Foxc2".Oncogene.29 (7):1031–40.doi:10.1038/onc.2009.397.PMC 2824778.PMID 19935708.
  9. ^Lidell ME, Seifert EL, Westergren R, Heglind M, Gowing A, Sukonina V, Arani Z, Itkonen P, Wallin S, Westberg F, Fernandez-Rodriguez J, Laakso M, Nilsson T, Peng XR, Harper ME, Enerbäck S (Feb 2011)."The adipocyte-expressed forkhead transcription factor Foxc2 regulates metabolism through altered mitochondrial function".Diabetes.60 (2):427–35.doi:10.2337/db10-0409.PMC 3028341.PMID 21270254.
  10. ^Cederberg A, Gronning LM, Ahren B, Tasken K, Carlsson P, Enerback S (2001)."FOXC2 is a winged helix gene that counteracts obesity, hypertriglyceridemia, and diet-induced insulin resistance".Cell.106 (5):563–73.doi:10.1016/s0092-8674(01)00474-3.PMID 11551504.S2CID 7411570.
  11. ^Connell F, Brice G, Mortimer P (2008). "Phenotypic characterization of primary lymphedema".Ann. N. Y. Acad. Sci.1131 (1):140–6.Bibcode:2008NYASA1131..140C.doi:10.1196/annals.1413.013.PMID 18519967.S2CID 20912436.
  12. ^abNorrmén C, Ivanov KI, Cheng J, Zangger N, Delorenzi M, Jaquet M, Miura N, Puolakkainen P, Horsley V, Hu J, Augustin HG, Ylä-Herttuala S, Alitalo K, Petrova TV (May 2009)."FOXC2 controls formation and maturation of lymphatic collecting vessels through cooperation with NFATc1".J. Cell Biol.185 (3):439–57.doi:10.1083/jcb.200901104.PMC 2700385.PMID 19398761.
  13. ^Ng MY, Andrew T, Spector TD, Jeffery S (March 2005)."Linkage to the FOXC2 region of chromosome 16 for varicose veins in otherwise healthy, unselected sibling pairs".J. Med. Genet.42 (3):235–9.doi:10.1136/jmg.2004.024075.PMC 1736007.PMID 15744037.
  14. ^Battula VL, Evans KW, Hollier BG, Shi Y, Marini FC, Ayyanan A, Wang RY, Brisken C, Guerra R, Andreeff M, Mani SA (June 2010)."Epithelial-Mesenchymal Transition-Derived Cells Exhibit Multi-Lineage Differentiation Potential Similar to Mesenchymal Stem Cells".Stem Cells.28 (8):1435–45.doi:10.1002/stem.467.PMC 3523728.PMID 20572012.
  15. ^Mani SA, Yang J, Brooks M, Schwaninger G, Zhou A, Miura N, Kutok JL, Hartwell K, Richardson AL, Weinberg RA (June 2007)."Mesenchyme Forkhead 1 (FOXC2) plays a key role in metastasis and is associated with aggressive basal-like breast cancers".Proc. Natl. Acad. Sci. U.S.A.104 (24):10069–74.Bibcode:2007PNAS..10410069M.doi:10.1073/pnas.0703900104.PMC 1891217.PMID 17537911.

Further reading

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External links

[edit]
(1) Basic domains
(1.1) Basicleucine zipper (bZIP)
(1.2) Basic helix-loop-helix (bHLH)
Group A
Group B
Group C
bHLH-PAS
Group D
Group E
Group F
bHLH-COE
(1.3)bHLH-ZIP
(1.4) NF-1
(1.5) RF-X
(1.6) Basic helix-span-helix (bHSH)
(2)Zinc finger DNA-binding domains
(2.1)Nuclear receptor(Cys4)
subfamily 1
subfamily 2
subfamily 3
subfamily 4
subfamily 5
subfamily 6
subfamily 0
(2.2) Other Cys4
(2.3) Cys2His2
(2.4) Cys6
(2.5) Alternating composition
(2.6) WRKY
(3.1)Homeodomain
Antennapedia
ANTP class
protoHOX
Hox-like
metaHOX
NK-like
other
(3.2) Paired box
(3.3)Fork head /winged helix
(3.4)Heat shock factors
(3.5) Tryptophan clusters
(3.6) TEA domain
  • transcriptional enhancer factor
(4)β-Scaffold factors with minor groove contacts
(4.1)Rel homology region
(4.2)STAT
(4.3) p53-like
(4.4)MADS box
(4.6)TATA-binding proteins
(4.7)High-mobility group
(4.9) Grainyhead
(4.10) Cold-shock domain
(4.11) Runt
(0) Other transcription factors
(0.2) HMGI(Y)
(0.3)Pocket domain
(0.5)AP-2/EREBP-related factors
(0.6) Miscellaneous
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