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FLNA

From Wikipedia, the free encyclopedia
Protein-coding gene in humans
For the armed group in northern Mali, seeNational Liberation Front of Azawad.

FLNA
Available structures
PDBOrtholog search:PDBeRCSB
List of PDB id codes

2AAV,2BP3,2BRQ,2J3S,2JF1,2K3T,2K7P,2MTP,2W0P,2WFN,3CNK,3HOC,3HOP,3HOR,3ISW,3RGH,4M9P,4P3W

Identifiers
AliasesFLNA, ABP-280, ABPX, CSBS, CVD1, FLN, FLN-A, FLN1, FMD, MNS, NHBP, OPD, OPD1, OPD2, XLVD, XMVD, filamin A, FGS2
External IDsOMIM:300017;MGI:95556;HomoloGene:1119;GeneCards:FLNA;OMA:FLNA - orthologs
Gene location (Human)
X chromosome (human)
Chr.X chromosome (human)[1]
X chromosome (human)
Genomic location for FLNA
Genomic location for FLNA
BandXq28Start154,348,524bp[1]
End154,374,634bp[1]
Gene location (Mouse)
X chromosome (mouse)
Chr.X chromosome (mouse)[2]
X chromosome (mouse)
Genomic location for FLNA
Genomic location for FLNA
BandX A7.3|X 37.89 cMStart73,267,067bp[2]
End73,293,426bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • right coronary artery

  • popliteal artery

  • tibial arteries

  • ascending aorta

  • Descending thoracic aorta

  • body of uterus

  • saphenous vein

  • gastric mucosa

  • left coronary artery

  • muscle layer of sigmoid colon
Top expressed in
  • tunica media of zone of aorta

  • granulocyte

  • ascending aorta

  • uterus

  • cervix

  • umbilical cord

  • external carotid artery

  • aortic valve

  • internal carotid artery

  • tail of embryo
More reference expression data
BioGPS




More reference expression data
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo /QuickGO
Orthologs
SpeciesHumanMouse
Entrez

2316

192176

Ensembl

ENSG00000196924

ENSMUSG00000031328

UniProt

P21333

Q8BTM8

RefSeq (mRNA)

NM_001110556
NM_001456

NM_001290421
NM_010227

RefSeq (protein)

NP_001104026
NP_001447

NP_001277350
NP_034357
NP_001390993

Location (UCSC)Chr X: 154.35 – 154.37 MbChr X: 73.27 – 73.29 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Filamin A, alpha (FLNA) is aprotein that in humans is encoded by theFLNAgene.[5][6]

Structure

[edit]

The structure of Filamin A, alpha includes anactin binding N terminal domain, 24 internal repeats and 2 hinge regions.[7][8]

Function

[edit]

Actin-binding protein, orfilamin, is a 280-kD protein that crosslinksactin filaments into orthogonal networks in corticalcytoplasm and participates in the anchoring of membrane proteins for the actincytoskeleton. Remodeling of the cytoskeleton is central to the modulation of cell shape and migration. Filamin A, encoded by the FLNA gene, is a widely expressed filamin that regulates the reorganization of the actin cytoskeleton by interacting withintegrins,transmembrane receptor complexes, andsecondary messengers.[9] At least 31 disease-causing mutations in this gene have been discovered.[10]

DNA repair

[edit]

Interaction of FLNA with theBRCA1 protein is required for efficient regulation of early stages ofDNA repair processes.[11] FLNA is implicated in the control of the DNA repair process ofhomologous recombination andnon-homologous end joining.[11]

Interactions

[edit]

Filamin has been shown tointeract with:

References

[edit]
  1. ^abcGRCh38: Ensembl release 89: ENSG00000196924Ensembl, May 2017
  2. ^abcGRCm38: Ensembl release 89: ENSMUSG00000031328Ensembl, May 2017
  3. ^"Human PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^"Mouse PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^Gorlin JB, Henske E, Warren ST, Kunst CB, D'Urso M, Palmieri G, et al. (October 1993). "Actin-binding protein (ABP-280) filamin gene (FLN) maps telomeric to the color vision locus (R/GCP) and centromeric to G6PD in Xq28".Genomics.17 (2):496–498.doi:10.1006/geno.1993.1354.PMID 8406501.
  6. ^Robertson SP, Twigg SR, Sutherland-Smith AJ, Biancalana V, Gorlin RJ, Horn D, et al. (March 2003)."Localized mutations in the gene encoding the cytoskeletal protein filamin A cause diverse malformations in humans".Nature Genetics.33 (4):487–491.doi:10.1038/ng1119.PMID 12612583.
  7. ^Gräber P, Witt HT (February 1976). "Relations between the electrical potential, pH gradient, proton flux and phosphorylation in the photosynthetic membrane".Biochimica et Biophysica Acta (BBA) - Bioenergetics.423 (2):141–163.doi:10.1016/0005-2728(76)90174-2.PMID 2316.
  8. ^"P21333 (FLNA_HUMAN): Filamin-A".UniProt.
  9. ^"Entrez Gene: FLNA filamin A, alpha (actin binding protein 280)".
  10. ^Šimčíková D, Heneberg P (December 2019)."Refinement of evolutionary medicine predictions based on clinical evidence for the manifestations of Mendelian diseases".Scientific Reports.9 (1) 18577.Bibcode:2019NatSR...918577S.doi:10.1038/s41598-019-54976-4.PMC 6901466.PMID 31819097.
  11. ^abVelkova A, Carvalho MA, Johnson JO, Tavtigian SV, Monteiro AN (April 2010)."Identification of Filamin A as a BRCA1-interacting protein required for efficient DNA repair".Cell Cycle.9 (7). Georgetown, Tex.:1421–1433.doi:10.4161/cc.9.7.11256.PMC 3040726.PMID 20305393.
  12. ^Yuan Y, Shen Z (December 2001)."Interaction with BRCA2 suggests a role for filamin-1 (hsFLNa) in DNA damage response".Journal of Biological Chemistry.276 (51):48318–48324.doi:10.1074/jbc.M102557200.PMID 11602572.
  13. ^van der Flier A, Kuikman I, Kramer D, Geerts D, Kreft M, Takafuta T, et al. (January 2002)."Different splice variants of filamin-B affect myogenesis, subcellular distribution, and determine binding to integrin [beta] subunits".The Journal of Cell Biology.156 (2):361–376.doi:10.1083/jcb.200103037.PMC 2199218.PMID 11807098.
  14. ^Loo DT, Kanner SB, Aruffo A (September 1998)."Filamin binds to the cytoplasmic domain of the beta1-integrin. Identification of amino acids responsible for this interaction".Journal of Biological Chemistry.273 (36):23304–23312.doi:10.1074/jbc.273.36.23304.PMID 9722563.
  15. ^Hjälm G, MacLeod RJ, Kifor O, Chattopadhyay N, Brown EM (September 2001)."Filamin-A binds to the carboxyl-terminal tail of the calcium-sensing receptor, an interaction that participates in CaR-mediated activation of mitogen-activated protein kinase".Journal of Biological Chemistry.276 (37):34880–34887.doi:10.1074/jbc.M100784200.PMID 11390380.
  16. ^Awata H, Huang C, Handlogten ME, Miller RT (September 2001)."Interaction of the calcium-sensing receptor and filamin, a potential scaffolding protein".Journal of Biological Chemistry.276 (37):34871–34879.doi:10.1074/jbc.M100775200.PMID 11390379.
  17. ^Tu Y, Wu S, Shi X, Chen K, Wu C (April 2003)."Migfilin and Mig-2 link focal adhesions to filamin and the actin cytoskeleton and function in cell shape modulation".Cell.113 (1):37–47.doi:10.1016/s0092-8674(03)00163-6.PMID 12679033.
  18. ^Nagano T, Yoneda T, Hatanaka Y, Kubota C, Murakami F, Sato M (July 2002). "Filamin A-interacting protein (FILIP) regulates cortical cell migration out of the ventricular zone".Nature Cell Biology.4 (7):495–501.doi:10.1038/ncb808.PMID 12055638.S2CID 4795393.
  19. ^Sheen VL, Feng Y, Graham D, Takafuta T, Shapiro SS, Walsh CA (November 2002)."Filamin A and Filamin B are co-expressed within neurons during periods of neuronal migration and can physically interact".Human Molecular Genetics.11 (23):2845–2854.doi:10.1093/hmg/11.23.2845.PMID 12393796.
  20. ^Donaldson JC, Dise RS, Ritchie MD, Hanks SK (August 2002)."Nephrocystin-conserved domains involved in targeting to epithelial cell-cell junctions, interaction with filamins, and establishing cell polarity".Journal of Biological Chemistry.277 (32):29028–29035.doi:10.1074/jbc.M111697200.PMID 12006559.
  21. ^Ohta Y, Suzuki N, Nakamura S, Hartwig JH, Stossel TP (March 1999)."The small GTPase RalA targets filamin to induce filopodia".Proceedings of the National Academy of Sciences of the United States of America.96 (5):2122–2128.Bibcode:1999PNAS...96.2122O.doi:10.1073/pnas.96.5.2122.PMC 26747.PMID 10051605.
  22. ^He X, Li Y, Schembri-King J, Jakes S, Hayashi J (August 2000). "Identification of actin binding protein, ABP-280, as a binding partner of human Lnk adaptor protein".Molecular Immunology.37 (10):603–612.doi:10.1016/s0161-5890(00)00070-5.PMID 11163396.
  23. ^Bellanger JM, Astier C, Sardet C, Ohta Y, Stossel TP, Debant A (December 2000)."The Rac1- and RhoG-specific GEF domain of Trio targets filamin to remodel cytoskeletal actin".Nature Cell Biology.2 (12):888–892.doi:10.1038/35046533.PMID 11146652.S2CID 10182923.
  24. ^Tsuchiya H, Iseda T, Hino O (July 1996). "Identification of a novel protein (VBP-1) binding to the von Hippel-Lindau (VHL) tumor suppressor gene product".Cancer Research.56 (13):2881–2885.PMID 8674032.
  25. ^Zhou MI, Wang H, Ross JJ, Kuzmin I, Xu C, Cohen HT (October 2002)."The von Hippel-Lindau tumor suppressor stabilizes novel plant homeodomain protein Jade-1".Journal of Biological Chemistry.277 (42):39887–39898.doi:10.1074/jbc.M205040200.PMID 12169691.

Further reading

[edit]


PDB gallery
  • 2aav: Solution NMR structure of Filamin A domain 17
    2aav: Solution NMR structure of Filamin A domain 17
  • 2bp3: CRYSTAL STRUCTURE OF FILAMIN A DOMAIN 17 AND GPIB ALPHA CYTOPLASMIC DOMAIN COMPLEX
    2bp3: CRYSTAL STRUCTURE OF FILAMIN A DOMAIN 17 AND GPIB ALPHA CYTOPLASMIC DOMAIN COMPLEX
  • 2brq: CRYSTAL STRUCTURE OF THE FILAMIN A REPEAT 21 COMPLEXED WITH THE INTEGRIN BETA7 CYTOPLASMIC TAIL PEPTIDE
    2brq: CRYSTAL STRUCTURE OF THE FILAMIN A REPEAT 21 COMPLEXED WITH THE INTEGRIN BETA7 CYTOPLASMIC TAIL PEPTIDE
Human
Microfilaments
andABPs
Myofilament
Actins
Myosins
Other
Other
Intermediate
filaments
Type 1/2
(Keratin,
Cytokeratin)
Epithelial keratins
(soft alpha-keratins)
Hair keratins
(hard alpha-keratins)
Ungrouped alpha
Not alpha
Type 3
Type 4
Type 5
Microtubules
andMAPs
Tubulins
MAPs
Kinesins
Dyneins
Microtubule organising proteins
Microtubule severing proteins
Other
Catenins
Membrane
Other
Nonhuman
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