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EN1 (gene)

From Wikipedia, the free encyclopedia
Protein-coding gene in the species Homo sapiens
EN1
Identifiers
AliasesEN1, engrailed homeobox 1, ENDOVESLB
External IDsOMIM:131290;MGI:95389;HomoloGene:50663;GeneCards:EN1;OMA:EN1 - orthologs
Gene location (Human)
Chromosome 2 (human)
Chr.Chromosome 2 (human)[1]
Chromosome 2 (human)
Genomic location for EN1
Genomic location for EN1
Band2q14.2Start118,842,171bp[1]
End118,847,648bp[1]
Gene location (Mouse)
Chromosome 1 (mouse)
Chr.Chromosome 1 (mouse)[2]
Chromosome 1 (mouse)
Genomic location for EN1
Genomic location for EN1
Band1 E2.3|1 52.74 cMStart120,530,147bp[2]
End120,535,721bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • pars reticulata

  • skin of leg

  • gastrocnemius muscle

  • muscle of thigh

  • pars compacta

  • skin of abdomen

  • skin of hip

  • skin of thigh

  • skin of arm

  • muscle of arm
Top expressed in
  • sclerotome

  • Apical ectodermal ridge

  • surface ectoderm

  • rhombic lip

  • thoracic vertebral column

  • hair

  • ventral tegmental area

  • lumbar subsegment of spinal cord

  • pharynx

  • interpeduncular nucleus
More reference expression data
BioGPS
More reference expression data
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo /QuickGO
Orthologs
SpeciesHumanMouse
Entrez

2019

13798

Ensembl

ENSG00000163064

ENSMUSG00000058665

UniProt

Q05925

P09065

RefSeq (mRNA)

NM_001426

NM_010133

RefSeq (protein)

NP_001417

NP_034263

Location (UCSC)Chr 2: 118.84 – 118.85 MbChr 1: 120.53 – 120.54 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Homeobox protein engrailed-1 is aprotein that in humans is encoded by theEN1gene.[5][6]

Function

[edit]

Homeobox-containing genes are thought to have a role in controlling development. InDrosophila, theengrailed (en) gene plays an important role during development in segmentation, where it is required for the formation of posterior compartments. Different mutations in the mouse homologs,En1 andEn2, produced different developmental defects that frequently are lethal. The humanengrailed homologs1 and2 encode homeodomain-containing proteins and have been implicated in the control of pattern formation during development of the central nervous system and the limbs.[6]

Engrailed (En)1 is a homeobox gene that helps regulate development in the dorsal midbrain and anterior hindbrain (cerebellum andcolliculi) of humans. It is also essential in regulating the establishment of a dorso-ventral pattern in developing limbs. The expression ofEn1 is regulated until 13 days after fertilization by Fgf8, which controls the development of the forebrain and hindbrain.En1 is first expressed in this region on day 9.5 after fertilization for about 12 hours untilEn2 is expressed. AfterEn2 expression,En1 is expressed again in other tissues such as somites and limbectoderm throughout development.[7] Aknockout mouse model with theEn1 homeobox deleted was developed; mice died less than 24 hours after birth because appeared to be unable to feed. The brains of the mice were studied and most of the cerebellum, colliculi, and cranial nerves 3 and 4 were missing. There was clear deletion in the mid-hindbrain, isthmus, junction region that began at day 9.5 after fertilization. All of the mice demonstrated marked forepaw deformities including fusion of digits and abnormal dorso-ventral patterning. The 13th ribs and sternums displayed delayed and abnormalossification. The mouse model demonstrated that the expression ofEn1 is critical in the correct development of the brain, limbs, and sternum.[8]

In 2021, a group of scientists and physicians aroundAndrea Superti-Furga in Lausanne and Stefan Mundlos in Berlin showed that biallelic loss-of-function variants at theEN1 locus result in a human phenotype that includes a severe impairment of limb development as well as cerebellar aplasia,[9] reproducing the phenotype first observed in the gene knock-out mice described above. They also found that there is along non-coding RNA (lncRNA) element at approx. 300 kb distance fromEN1, that they calledMAENLI (for Master on Engrailed-1 in the Limbs), that is responsible for activation ofEN1 gene expression in the developing limbs. The biallelic loss of theMAENLI lncRNA element results in impairment of limb development in humans as seen in the EN1-associated condition, while cerebellar development is not affected.

References

[edit]
  1. ^abcGRCh38: Ensembl release 89: ENSG00000163064Ensembl, May 2017
  2. ^abcGRCm38: Ensembl release 89: ENSMUSG00000058665Ensembl, May 2017
  3. ^"Human PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^"Mouse PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^Kohler A, Logan C, Joyner AL, Muenke M (Mar 1993)."Regional assignment of the human homeobox-containing gene EN1 to chromosome 2q13-q21".Genomics.15 (1):233–235.doi:10.1006/geno.1993.1045.PMID 8094370.
  6. ^ab"Entrez Gene: EN1 engrailed homeobox 1".
  7. ^Sgaier SK, Lao Z, Villanueva MP, Berenshteyn F, Stephen D, Turnbull RK, Joyner AL (June 2007)."Genetic subdivision of the tectum and cerebellum into functionally related regions based on differential sensitivity to engrailed proteins".Development.134 (12):2325–35.doi:10.1242/dev.000620.PMC 2840613.PMID 17537797.
  8. ^Wurst W, Auerbach AB, Joyner AL (July 1994). "Multiple developmental defects in Engrailed-1 mutant mice: an early mid-hindbrain deletion and patterning defects in forelimbs and sternum".Development.120 (7):2065–75.doi:10.1242/dev.120.7.2065.PMID 7925010.
  9. ^Allou L, Balzano S, Magg A, Quinodoz M, Royer-Bertrand B, Schöpflin R, et al. (April 2021)."Non-coding deletions identify Maenli lncRNA as a limb-specific En1 regulator".Nature.592 (7852):93–98.Bibcode:2021Natur.592...93A.doi:10.1038/s41586-021-03208-9.hdl:21.11116/0000-0008-1272-3.PMID 33568816.S2CID 231882012.

Further reading

[edit]

External links

[edit]

This article incorporates text from theUnited States National Library of Medicine, which is in thepublic domain.

(1) Basic domains
(1.1) Basicleucine zipper (bZIP)
(1.2) Basic helix-loop-helix (bHLH)
Group A
Group B
Group C
bHLH-PAS
Group D
Group E
Group F
bHLH-COE
(1.3)bHLH-ZIP
(1.4) NF-1
(1.5) RF-X
(1.6) Basic helix-span-helix (bHSH)
(2)Zinc finger DNA-binding domains
(2.1)Nuclear receptor(Cys4)
subfamily 1
subfamily 2
subfamily 3
subfamily 4
subfamily 5
subfamily 6
subfamily 0
(2.2) Other Cys4
(2.3) Cys2His2
(2.4) Cys6
(2.5) Alternating composition
(2.6) WRKY
(3.1)Homeodomain
Antennapedia
ANTP class
protoHOX
Hox-like
metaHOX
NK-like
other
(3.2) Paired box
(3.3)Fork head /winged helix
(3.4)Heat shock factors
(3.5) Tryptophan clusters
(3.6) TEA domain
  • transcriptional enhancer factor
(4)β-Scaffold factors with minor groove contacts
(4.1)Rel homology region
(4.2)STAT
(4.3) p53-like
(4.4)MADS box
(4.6)TATA-binding proteins
(4.7)High-mobility group
(4.9) Grainyhead
(4.10) Cold-shock domain
(4.11) Runt
(0) Other transcription factors
(0.2) HMGI(Y)
(0.3)Pocket domain
(0.5)AP-2/EREBP-related factors
(0.6) Miscellaneous


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