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EGR2

From Wikipedia, the free encyclopedia
Protein-coding gene in the species Homo sapiens

EGR2
Identifiers
AliasesEGR2, AT591, CMT1D, CMT4E, KROX20, early growth response 2, CHN1
External IDsOMIM:129010;MGI:95296;HomoloGene:20123;GeneCards:EGR2;OMA:EGR2 - orthologs
Gene location (Human)
Chromosome 10 (human)
Chr.Chromosome 10 (human)[1]
Chromosome 10 (human)
Genomic location for EGR2
Genomic location for EGR2
Band10q21.3Start62,811,996bp[1]
End62,819,167bp[1]
Gene location (Mouse)
Chromosome 10 (mouse)
Chr.Chromosome 10 (mouse)[2]
Chromosome 10 (mouse)
Genomic location for EGR2
Genomic location for EGR2
Band10 B5.1|10 34.96 cMStart67,535,475bp[2]
End67,542,188bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • gallbladder

  • tibial nerve

  • granulocyte

  • testicle

  • monocyte

  • gastric mucosa

  • smooth muscle tissue

  • sural nerve

  • skin of abdomen

  • lymph node
Top expressed in
  • neural ectoderm

  • neuromere

  • rhombomere

  • lip

  • zone of skin

  • spinal nerve

  • ureter

  • urethra

  • thymus

  • male urethra
More reference expression data
BioGPS
More reference expression data
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo /QuickGO
Orthologs
SpeciesHumanMouse
Entrez

1959

13654

Ensembl

ENSG00000122877

ENSMUSG00000037868

UniProt

P11161

P08152

RefSeq (mRNA)

NM_000399
NM_001136177
NM_001136178
NM_001136179
NM_001321037

NM_010118
NM_001347458

RefSeq (protein)

NP_000390
NP_001129649
NP_001129650
NP_001129651
NP_001307966

NP_001334387
NP_034248
NP_001360912
NP_001360914
NP_001360915

NP_001360916

Location (UCSC)Chr 10: 62.81 – 62.82 MbChr 10: 67.54 – 67.54 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Early growth response protein 2 (EGR2), also known asKrox20, is atranscription factor encoded by theEGR2gene in humans. It is highly expressed in migratingneural crest cells and later in neural crest-derived cells of the cranial ganglia.[5][6][7] Expression ofEGR2 is restricted to earlyhindbrain development,[6][8] and the gene is evolutionarily conserved among vertebrates, including humans, mice, chicks, and zebrafish.[9] The conservation of its amino acid sequence and embryonic expression pattern underscores its essential role in hindbrain segmentation and neural differentiation.[7][10][11][12]

Structure

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The EGR2 protein contains three tandemC2H2-type zinc finger domains that mediate specific DNA binding.[6][8] These zinc fingers enable EGR2 to function as atranscriptional regulator of genes involved inneural development andmyelination.

Function

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EGR2 acts as atranscription factor that regulates gene expression during neural development and peripheral nerve myelination. It binds to specific DNA sequences via its zinc finger motifs to control target genes essential forSchwann cell differentiation andmyelin sheath formation.[13] It is also expressed in osteoprogenitor cells and has been implicated in the proliferation ofEwing sarcoma–derived cell lines, suggesting a role in both bone biology and tumorigenesis.[14][15]

Clinical significance

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Mutations inEGR2 are associated with several hereditary demyelinating neuropathies, includingCharcot–Marie–Tooth disease type 1D,[13]Dejerine–Sottas disease,[16] and congenital hypomyelinating neuropathy.[17]Recent studies have also suggested thatEGR2 expression in hair follicle stem cells may influence hair maintenance and pigmentation, with loss of Krox20-expressing cells contributing tomale-pattern baldness andgraying hair.[18]

Deletion ofEgr2 in mice results in loss of protein-coding capacity, including the DNA-binding domain, leading to perinatal lethality and severe hindbrain malformations.[6][8] These defects include aberrant formation of cranial sensory ganglia, fusion of the trigeminal (V), facial (VII), and auditory (VIII) nerves, and disorganization of their proximal roots as they enter the brainstem.[19][20][21]

References

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  1. ^abcGRCh38: Ensembl release 89: ENSG00000122877Ensembl, May 2017
  2. ^abcGRCm38: Ensembl release 89: ENSMUSG00000037868Ensembl, May 2017
  3. ^"Human PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^"Mouse PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^Chavrier P, Janssen-Timmen U, Mattéi MG, Zerial M, Bravo R, Charnay P (February 1989)."Structure, chromosome location, and expression of the mouse zinc finger gene Krox-20: multiple gene products and coregulation with the proto-oncogene c-fos".Molecular and Cellular Biology.9 (2):787–97.doi:10.1128/mcb.9.2.787.PMC 362656.PMID 2496302.
  6. ^abcdSwiatek PJ, Gridley T (November 1993)."Perinatal lethality and defects in hindbrain development in mice homozygous for a targeted mutation of the zinc finger gene Krox20".Genes & Development.7 (11):2071–84.doi:10.1101/gad.7.11.2071.PMID 8224839.
  7. ^abWilkinson DG, Bhatt S, Chavrier P, Bravo R, Charnay P (February 1989). "Segment-specific expression of a zinc-finger gene in the developing nervous system of the mouse".Nature.337 (6206):461–4.Bibcode:1989Natur.337..461W.doi:10.1038/337461a0.PMID 2915691.S2CID 4336310.
  8. ^abcBradley LC, Snape A, Bhatt S, Wilkinson DG (January 1993). "The structure and expression of the Xenopus Krox-20 gene: conserved and divergent patterns of expression in rhombomeres and neural crest".Mechanisms of Development.40 (1–2):73–84.doi:10.1016/0925-4773(93)90089-g.PMID 8443108.S2CID 20347966.
  9. ^Bhat RV, Worley PF, Cole AJ, Baraban JM (April 1992). "Activation of the zinc finger encoding gene krox-20 in adult rat brain: comparison with zif268".Brain Research. Molecular Brain Research.13 (3):263–6.doi:10.1016/0169-328x(92)90034-9.PMID 1317498.
  10. ^Wilkinson DG, Bhatt S, Cook M, Boncinelli E, Krumlauf R (October 1989). "Segmental expression of Hox-2 homoeobox-containing genes in the developing mouse hindbrain".Nature.341 (6241):405–9.Bibcode:1989Natur.341..405W.doi:10.1038/341405a0.PMID 2571936.S2CID 4324322.
  11. ^Hunt P, Gulisano M, Cook M, Sham MH, Faiella A, Wilkinson D, et al. (October 1991). "A distinct Hox code for the branchial region of the vertebrate head".Nature.353 (6347):861–4.Bibcode:1991Natur.353..861H.doi:10.1038/353861a0.PMID 1682814.S2CID 4312466.
  12. ^Oxtoby E, Jowett T (March 1993)."Cloning of the zebrafish krox-20 gene (krx-20) and its expression during hindbrain development".Nucleic Acids Research.21 (5):1087–95.doi:10.1093/nar/21.5.1087.PMC 309267.PMID 8464695.
  13. ^ab"Entrez Gene: EGR2 early growth response 2 (Krox-20 homolog, Drosophila)".
  14. ^Chandra A, Lan S, Zhu J, Siclari VA, Qin L (July 2013)."Epidermal growth factor receptor (EGFR) signaling promotes proliferation and survival in osteoprogenitors by increasing early growth response 2 (EGR2) expression".The Journal of Biological Chemistry.288 (28):20488–98.doi:10.1074/jbc.M112.447250.PMC 3711314.PMID 23720781.
  15. ^Grünewald TG, Bernard V, Gilardi-Hebenstreit P, Raynal V, Surdez D, Aynaud MM, et al. (September 2015)."Chimeric EWSR1-FLI1 regulates the Ewing sarcoma susceptibility gene EGR2 via a GGAA microsatellite".Nature Genetics.47 (9):1073–8.doi:10.1038/ng.3363.PMC 4591073.PMID 26214589.
  16. ^Boerkoel CF, Takashima H, Bacino CA, Daentl D, Lupski JR (July 2001). "EGR2 mutation R359W causes a spectrum of Dejerine-Sottas neuropathy".Neurogenetics.3 (3):153–7.doi:10.1007/s100480100107.PMID 11523566.S2CID 32746701.
  17. ^Warner LE, Mancias P, Butler IJ, McDonald CM, Keppen L, Koob KG, et al. (April 1998). "Mutations in the early growth response 2 (EGR2) gene are associated with hereditary myelinopathies".Nature Genetics.18 (4):382–4.doi:10.1038/ng0498-382.PMID 9537424.S2CID 25550479.
  18. ^Le L."Scientists find skin cells at the root of balding, gray hair".UT Southwestern Medical Center. Archived fromthe original on 9 May 2017. Retrieved9 May 2017.
  19. ^Frohman MA, Boyle M, Martin GR (October 1990). "Isolation of the mouse Hox-2.9 gene; analysis of embryonic expression suggests that positional information along the anterior-posterior axis is specified by mesoderm".Development.110 (2):589–607.doi:10.1242/dev.110.2.589.PMID 1983472.
  20. ^Murphy P, Davidson DR, Hill RE (September 1989). "Segment-specific expression of a homoeobox-containing gene in the mouse hindbrain".Nature.341 (6238):156–9.Bibcode:1989Natur.341..156M.doi:10.1038/341156a0.PMID 2571087.S2CID 4371764.
  21. ^Nieto MA, Bradley LC, Wilkinson DG (1991). "Conserved segmental expression of Krox-20 in the vertebrate hindbrain and its relationship to lineage restriction".Development. Suppl 2:59–62.doi:10.1242/dev.113.Supplement_2.59.hdl:10261/32226.PMID 1688180.

Further reading

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External links

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PDB gallery
  • 1a1i: RADR (ZIF268 VARIANT) ZINC FINGER-DNA COMPLEX (GCAC SITE)
    1a1i: RADR (ZIF268 VARIANT) ZINC FINGER-DNA COMPLEX (GCAC SITE)
  • 1a1j: RADR (ZIF268 VARIANT) ZINC FINGER-DNA COMPLEX (GCGT SITE)
    1a1j: RADR (ZIF268 VARIANT) ZINC FINGER-DNA COMPLEX (GCGT SITE)
  • 1a1k: RADR (ZIF268 VARIANT) ZINC FINGER-DNA COMPLEX (GACC SITE)
    1a1k: RADR (ZIF268 VARIANT) ZINC FINGER-DNA COMPLEX (GACC SITE)
  • 1a1l: ZIF268 ZINC FINGER-DNA COMPLEX (GCAC SITE)
    1a1l: ZIF268 ZINC FINGER-DNA COMPLEX (GCAC SITE)
  • 1aay: ZIF268 ZINC FINGER-DNA COMPLEX
    1aay: ZIF268 ZINC FINGER-DNA COMPLEX
  • 1jk1: Zif268 D20A Mutant Bound to WT DNA Site
    1jk1: Zif268 D20A Mutant Bound to WT DNA Site
  • 1jk2: Zif268 D20A mutant bound to the GCT DNA site
    1jk2: Zif268 D20A mutant bound to the GCT DNA site
  • 1p47: Crystal Structure of tandem Zif268 molecules complexed to DNA
    1p47: Crystal Structure of tandem Zif268 molecules complexed to DNA
  • 1zaa: ZINC FINGER-DNA RECOGNITION: CRYSTAL STRUCTURE OF A ZIF268-DNA COMPLEX AT 2.1 ANGSTROMS
    1zaa: ZINC FINGER-DNA RECOGNITION: CRYSTAL STRUCTURE OF A ZIF268-DNA COMPLEX AT 2.1 ANGSTROMS
(1) Basic domains
(1.1) Basicleucine zipper (bZIP)
(1.2) Basic helix-loop-helix (bHLH)
Group A
Group B
Group C
bHLH-PAS
Group D
Group E
Group F
bHLH-COE
(1.3)bHLH-ZIP
(1.4) NF-1
(1.5) RF-X
(1.6) Basic helix-span-helix (bHSH)
(2)Zinc finger DNA-binding domains
(2.1)Nuclear receptor(Cys4)
subfamily 1
subfamily 2
subfamily 3
subfamily 4
subfamily 5
subfamily 6
subfamily 0
(2.2) Other Cys4
(2.3) Cys2His2
(2.4) Cys6
(2.5) Alternating composition
(2.6) WRKY
(3.1)Homeodomain
Antennapedia
ANTP class
protoHOX
Hox-like
metaHOX
NK-like
other
(3.2) Paired box
(3.3)Fork head /winged helix
(3.4)Heat shock factors
(3.5) Tryptophan clusters
(3.6) TEA domain
  • transcriptional enhancer factor
(4)β-Scaffold factors with minor groove contacts
(4.1)Rel homology region
(4.2)STAT
(4.3) p53-like
(4.4)MADS box
(4.6)TATA-binding proteins
(4.7)High-mobility group
(4.9) Grainyhead
(4.10) Cold-shock domain
(4.11) Runt
(0) Other transcription factors
(0.2) HMGI(Y)
(0.3)Pocket domain
(0.5)AP-2/EREBP-related factors
(0.6) Miscellaneous

This article incorporates text from theUnited States National Library of Medicine, which is in thepublic domain.

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