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E4F1

From Wikipedia, the free encyclopedia

Protein-coding gene in the species Homo sapiens
E4F1
Identifiers
AliasesE4F1, E4F, E4F transcription factor 1
External IDsOMIM:603022;MGI:109530;HomoloGene:3259;GeneCards:E4F1;OMA:E4F1 - orthologs
Gene location (Human)
Chromosome 16 (human)
Chr.Chromosome 16 (human)[1]
Chromosome 16 (human)
Genomic location for E4F1
Genomic location for E4F1
Band16p13.3Start2,223,580bp[1]
End2,235,742bp[1]
Gene location (Mouse)
Chromosome 17 (mouse)
Chr.Chromosome 17 (mouse)[2]
Chromosome 17 (mouse)
Genomic location for E4F1
Genomic location for E4F1
Band17 A3.3|17 12.39 cMStart24,662,752bp[2]
End24,689,287bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • right hemisphere of cerebellum

  • sural nerve

  • right lobe of thyroid gland

  • granulocyte

  • left lobe of thyroid gland

  • pituitary gland

  • skin of leg

  • skin of abdomen

  • apex of heart

  • anterior pituitary
Top expressed in
  • granulocyte

  • neural layer of retina

  • muscle of thigh

  • lip

  • right kidney

  • superior frontal gyrus

  • urethra

  • morula

  • morula

  • ventricular zone
More reference expression data
BioGPS
More reference expression data
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo /QuickGO
Orthologs
SpeciesHumanMouse
Entrez

1877

13560

Ensembl

ENSG00000167967

ENSMUSG00000024137

UniProt

Q66K89

Q8CCE9

RefSeq (mRNA)

NM_001288776
NM_001288778
NM_004424

NM_001301784
NM_007893
NM_001355708

RefSeq (protein)

NP_001275705
NP_001275707
NP_004415

NP_001288713
NP_031919
NP_001342637

Location (UCSC)Chr 16: 2.22 – 2.24 MbChr 17: 24.66 – 24.69 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Transcription factor E4F1 is aprotein that in humans is encoded by theE4F1gene.[5][6][7]

Function

[edit]

Thezinc finger protein encoded by this gene is one of several cellular transcription factors whoseDNA-binding activities are regulated through the action of adenovirus E1A. A 50-kDa amino-terminal product is generated from the full-length protein through proteolytic cleavage. The protein is differentially regulated by E1A-induced phosphorylation. The full-length gene product represses transcription from the E4 promoter in the absence of E1A, while the 50-kDa form acts as a transcriptional activator in its presence.[7]

Interactions

[edit]

E4F1 has been shown tointeract with:

References

[edit]
  1. ^abcGRCh38: Ensembl release 89: ENSG00000167967Ensembl, May 2017
  2. ^abcGRCm38: Ensembl release 89: ENSMUSG00000024137Ensembl, May 2017
  3. ^"Human PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^"Mouse PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^Saccone S, Sandy P, Meroni G, Gostissa M, Della Valle G, Del Sal G (November 1998). "Assignment of the E1A-regulated transcription factor E4F gene (E4F1) to human chromosome band 16p13.3 by in situ hybridization and somatic cell hybrids".Cytogenet Cell Genet.82 (1–2):99–100.doi:10.1159/000015075.PMID 9763670.S2CID 46826484.
  6. ^Burn TC, Connors TD, Van Raay TJ, Dackowski WR, Millholland JM, Klinger KW, Landes GM (December 1996)."Generation of a transcriptional map for a 700-kb region surrounding the polycystic kidney disease type 1 (PKD1) and tuberous sclerosis type 2 (TSC2) disease genes on human chromosome 16p3.3".Genome Res.6 (6):525–537.doi:10.1101/gr.6.6.525.PMID 8828041.
  7. ^ab"Entrez Gene: E4F1 E4F transcription factor 1".
  8. ^abRizos H, Diefenbach E, Badhwar P, Woodruff S, Becker TM, Rooney RJ, Kefford RF (February 2003)."Association of p14ARF with the p120E4F transcriptional repressor enhances cell cycle inhibition".J. Biol. Chem.278 (7):4981–4989.doi:10.1074/jbc.M210978200.PMID 12446718.
  9. ^Sandy P, Gostissa M, Fogal V, Cecco LD, Szalay K, Rooney RJ, Schneider C, Del Sal G (January 2000)."p53 is involved in the p120E4F-mediated growth arrest".Oncogene.19 (2):188–199.doi:10.1038/sj.onc.1203250.PMID 10644996.
  10. ^Fajas L, Paul C, Zugasti O, Le Cam L, Polanowska J, Fabbrizio E, Medema R, Vignais ML, Sardet C (July 2000)."pRB binds to and modulates the transrepressing activity of the E1A-regulated transcription factor p120E4F".Proc. Natl. Acad. Sci. U.S.A.97 (14):7738–7743.Bibcode:2000PNAS...97.7738F.doi:10.1073/pnas.130198397.PMC 16614.PMID 10869426.

Further reading

[edit]

External links

[edit]

This article incorporates text from theUnited States National Library of Medicine, which is in thepublic domain.

(1) Basic domains
(1.1) Basicleucine zipper (bZIP)
(1.2) Basic helix-loop-helix (bHLH)
Group A
Group B
Group C
bHLH-PAS
Group D
Group E
Group F
bHLH-COE
(1.3)bHLH-ZIP
(1.4) NF-1
(1.5) RF-X
(1.6) Basic helix-span-helix (bHSH)
(2)Zinc finger DNA-binding domains
(2.1)Nuclear receptor(Cys4)
subfamily 1
subfamily 2
subfamily 3
subfamily 4
subfamily 5
subfamily 6
subfamily 0
(2.2) Other Cys4
(2.3) Cys2His2
(2.4) Cys6
(2.5) Alternating composition
(2.6) WRKY
(3.1)Homeodomain
Antennapedia
ANTP class
protoHOX
Hox-like
metaHOX
NK-like
other
(3.2) Paired box
(3.3)Fork head /winged helix
(3.4)Heat shock factors
(3.5) Tryptophan clusters
(3.6) TEA domain
  • transcriptional enhancer factor
(4)β-Scaffold factors with minor groove contacts
(4.1)Rel homology region
(4.2)STAT
(4.3) p53-like
(4.4)MADS box
(4.6)TATA-binding proteins
(4.7)High-mobility group
(4.9) Grainyhead
(4.10) Cold-shock domain
(4.11) Runt
(0) Other transcription factors
(0.2) HMGI(Y)
(0.3)Pocket domain
(0.5)AP-2/EREBP-related factors
(0.6) Miscellaneous
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