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Decoy receptor 3

From Wikipedia, the free encyclopedia
(Redirected fromDcR3)
Protein found in humans
TNFRSF6B
Available structures
PDBHuman UniProt search:PDBeRCSB
List of PDB id codes

3K51,3MHD,3MI8,4J6G,4KGG,4KGQ,4MSV

Identifiers
AliasesTNFRSF6B, DCR3, DJ583P15.1.1, M68, M68E, TR6, tumor necrosis factor receptor superfamily member 6b, TNF receptor superfamily member 6b
External IDsOMIM:603361;HomoloGene:48242;GeneCards:TNFRSF6B;OMA:TNFRSF6B - orthologs
Gene location (Human)
Chromosome 20 (human)
Chr.Chromosome 20 (human)[1]
Chromosome 20 (human)
Genomic location for TNFRSF6B
Genomic location for TNFRSF6B
Band20q13.33Start63,696,652bp[1]
End63,698,684bp[1]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • olfactory zone of nasal mucosa

  • spleen

  • subcutaneous adipose tissue

  • right lung

  • upper lobe of left lung

  • C1 segment

  • right hemisphere of cerebellum

  • appendix

  • anterior pituitary

  • amygdala
    n/a
More reference expression data
BioGPS
n/a
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo /QuickGO
Orthologs
SpeciesHumanMouse
Entrez

8771

n/a

Ensembl

ENSG00000243509

n/a

UniProt

O95407

n/a

RefSeq (mRNA)

NM_032945
NM_003823

n/a

RefSeq (protein)

NP_003814

n/a

Location (UCSC)Chr 20: 63.7 – 63.7 Mbn/a
PubMed search[2]n/a
Wikidata
View/Edit Human

Decoy receptor 3 (Dcr3), also known astumor necrosis factor receptor superfamily member 6B (TNFRSF6B),TR6 andM68, is a soluble protein of thetumor necrosis factor receptor superfamily which inhibitsFas ligand-inducedapoptosis.[3][4][5]

Discovery

[edit]

Dcr3 was identified in 1998 by the search of genes with homology to the TNFR gene superfamily in expressed sequence tag (EST) database.

Structure

[edit]

Theopen reading frame of TNFRSF6B encodes 300 amino acids with a 29-residue signal sequence and four tandem cystein-rich repeats. Two transcript variants encoding the same isoform, but differing in the 5' UTR, have been observed for this gene.[5] Unlike most of the other members of TNFR superfamily, TNFRSF6 is a soluble protein which contains no transmembrane domain.

Function

[edit]

This gene belongs to thetumor necrosis factor receptor superfamily. It acts as a decoy receptor that competes withdeath receptors for ligand binding. The encoded protein is postulated to play a regulatory role in suppressingFasL- and LIGHT-mediated cell death and T cell activation as well as to induceangiogenesis via neutralization ofTL1A. Overexpression of this gene has been noted in various tumors e.g. gastrointestinal tract tumors, and it is located in a gene-rich cluster on chromosome 20, with other potentially tumor-related genes.[5]

Interactions

[edit]

TNFRSF6B has been shown tointeract with:

References

[edit]
  1. ^abcGRCh38: Ensembl release 89: ENSG00000243509Ensembl, May 2017
  2. ^"Human PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  3. ^abPitti RM, Marsters SA, Lawrence DA, Roy M, Kischkel FC, Dowd P, Huang A, Donahue CJ, Sherwood SW, Baldwin DT, Godowski PJ, Wood WI, Gurney AL, Hillan KJ, Cohen RL, Goddard AD, Botstein D, Ashkenazi A (Jan 1999). "Genomic amplification of a decoy receptor for Fas ligand in lung and colon cancer".Nature.396 (6712):699–703.doi:10.1038/25387.PMID 9872321.S2CID 4427455.
  4. ^abcYu KY, Kwon B, Ni J, Zhai Y, Ebner R, Kwon BS (Jun 1999)."A newly identified member of tumor necrosis factor receptor superfamily (TR6) suppresses LIGHT-mediated apoptosis".J Biol Chem.274 (20):13733–6.doi:10.1074/jbc.274.20.13733.PMID 10318773.
  5. ^abc"Entrez Gene: TNFRSF6B tumor necrosis factor receptor superfamily, member 6b, decoy".
  6. ^Zhang J, Salcedo TW, Wan X, Ullrich S, Hu B, Gregorio T, Feng P, Qi S, Chen H, Cho YH, Li Y, Moore PA, Wu J (June 2001)."Modulation of T-cell responses to alloantigens by TR6/DcR3".J. Clin. Invest.107 (11):1459–68.doi:10.1172/JCI12159.PMC 209323.PMID 11390428.
  7. ^abHsu TL, Chang YC, Chen SJ, Liu YJ, Chiu AW, Chio CC, Chen L, Hsieh SL (May 2002)."Modulation of dendritic cell differentiation and maturation by decoy receptor 3".J. Immunol.168 (10):4846–53.doi:10.4049/jimmunol.168.10.4846.PMID 11994433.

Further reading

[edit]

External links

[edit]

This article incorporates text from theUnited States National Library of Medicine, which is in thepublic domain.

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