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Cubilin

From Wikipedia, the free encyclopedia
Mammalian protein found in humans

CUBN
Available structures
PDBOrtholog search:PDBeRCSB
List of PDB id codes

3KQ4

Identifiers
AliasesCUBN, IFCR, MGA1, gp280, cubilin, IGS, IGS1
External IDsOMIM:602997;MGI:1931256;HomoloGene:37434;GeneCards:CUBN;OMA:CUBN - orthologs
Gene location (Human)
Chromosome 10 (human)
Chr.Chromosome 10 (human)[1]
Chromosome 10 (human)
Genomic location for CUBN
Genomic location for CUBN
Band10p13Start16,823,966bp[1]
End17,129,811bp[1]
Gene location (Mouse)
Chromosome 2 (mouse)
Chr.Chromosome 2 (mouse)[2]
Chromosome 2 (mouse)
Genomic location for CUBN
Genomic location for CUBN
Band2 A1|2 9.86 cMStart13,281,149bp[2]
End13,496,624bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • kidney tubule

  • glomerulus

  • renal medulla

  • metanephric glomerulus

  • sperm

  • oocyte

  • right uterine tube

  • human kidney

  • gonad

  • secondary oocyte
Top expressed in
  • primitive streak

  • yolk sac

  • ileum

  • human kidney

  • epithelium of small intestine

  • intestinal villus

  • jejunum

  • epithelium of lens

  • Ileal epithelium

  • right kidney
More reference expression data
BioGPS


More reference expression data
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo /QuickGO
Orthologs
SpeciesHumanMouse
Entrez

8029

65969

Ensembl

ENSG00000107611

ENSMUSG00000026726

UniProt

O60494

Q9JLB4

RefSeq (mRNA)

NM_001081

NM_001081084

RefSeq (protein)

NP_001072

NP_001074553

Location (UCSC)Chr 10: 16.82 – 17.13 MbChr 2: 13.28 – 13.5 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Cubilin is aprotein that in humans is encoded by theCUBNgene.[5][6][7]

Function

[edit]

Cubilin (CUBN) acts as a receptor for intrinsic factor-vitamin B12 complexes. The role of receptor is supported by the presence of 27 CUB domains. Cubilin shows a restricted mode of expression according to protein profiling and transcriptomics analyses,[8] and is essentially only present in the kidneys and small intestine.[9] Mutations in CUBN may play a role inautosomal recessive megaloblastic anemia.[7] A complex ofamnionless and cubilin forms thecubam receptor.

Clinical significance

[edit]

Cubilin is a potentialdiagnostic andprognosticcancer biomarker for kidney cancer.[10] Based on patient survival data, high levels of cubilin in tumor cells is a favourableprognostic biomarker inrenal cell carcinoma.[11][12]

References

[edit]
  1. ^abcGRCh38: Ensembl release 89: ENSG00000107611Ensembl, May 2017
  2. ^abcGRCm38: Ensembl release 89: ENSMUSG00000026726Ensembl, May 2017
  3. ^"Human PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^"Mouse PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^Kozyraki R, Kristiansen M, Silahtaroglu A, Hansen C, Jacobsen C, Tommerup N, Verroust PJ, Moestrup SK (Jun 1998)."The human intrinsic factor-vitamin B12 receptor, cubilin: molecular characterization and chromosomal mapping of the gene to 10p within the autosomal recessive megaloblastic anemia (MGA1) region".Blood.91 (10):3593–600.doi:10.1182/blood.V91.10.3593.PMID 9572993.
  6. ^Moestrup SK, Kozyraki R, Kristiansen M, Kaysen JH, Rasmussen HH, Brault D, Pontillon F, Goda FO, Christensen EI, Hammond TG, Verroust PJ (Mar 1998)."The intrinsic factor-vitamin B12 receptor and target of teratogenic antibodies is a megalin-binding peripheral membrane protein with homology to developmental proteins".J Biol Chem.273 (9):5235–42.doi:10.1074/jbc.273.9.5235.PMID 9478979.
  7. ^ab"Entrez Gene: CUBN cubilin (intrinsic factor-cobalamin receptor)".
  8. ^Uhlén M, Fagerberg L, Hallström BM, Lindskog C, Oksvold P, Mardinoglu A, Sivertsson Å, Kampf C, Sjöstedt E (2015-01-23). "Tissue-based map of the human proteome".Science.347 (6220): 1260419.doi:10.1126/science.1260419.ISSN 0036-8075.PMID 25613900.S2CID 802377.
  9. ^"Tissue expression of CUBN - Summary - The Human Protein Atlas".www.proteinatlas.org. Retrieved2017-09-06.
  10. ^Gremel G, Djureinovic D, Niinivirta M, Laird A, Ljungqvist O, Johannesson H, Bergman J, Edqvist PH, Navani S (2017-01-04)."A systematic search strategy identifies cubilin as independent prognostic marker for renal cell carcinoma".BMC Cancer.17 (1): 9.doi:10.1186/s12885-016-3030-6.ISSN 1471-2407.PMC 5215231.PMID 28052770.
  11. ^Uhlen M, Zhang C, Lee S, Sjöstedt E, Fagerberg L, Bidkhori G, Benfeitas R, Arif M, Liu Z (2017-08-18)."A pathology atlas of the human cancer transcriptome".Science.357 (6352): eaan2507.doi:10.1126/science.aan2507.ISSN 0036-8075.PMID 28818916.
  12. ^"Expression of CUBN in renal cancer - The Human Protein Atlas".www.proteinatlas.org. Retrieved2017-09-06.

Further reading

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External links

[edit]
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