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Cav1.4

From Wikipedia, the free encyclopedia
Protein-coding gene in humans
CACNA1F
Identifiers
AliasesCACNA1F, AIED, COD3, COD4, CORDX, CORDX3, CSNB2, CSNB2A, CSNBX2, Cav1.4, Cav1.4alpha1, JM8, JMC8, OA2, calcium voltage-gated channel subunit alpha1 F
External IDsOMIM:300110;MGI:1859639;HomoloGene:74542;GeneCards:CACNA1F;OMA:CACNA1F - orthologs
Gene location (Human)
X chromosome (human)
Chr.X chromosome (human)[1]
X chromosome (human)
Genomic location for CACNA1F
Genomic location for CACNA1F
BandXp11.23Start49,205,063bp[1]
End49,233,371bp[1]
Gene location (Mouse)
X chromosome (mouse)
Chr.X chromosome (mouse)[2]
X chromosome (mouse)
Genomic location for CACNA1F
Genomic location for CACNA1F
BandX A1.1|X 3.42 cMStart7,473,322bp[2]
End7,501,435bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • granulocyte

  • right hemisphere of cerebellum

  • right uterine tube

  • right lung

  • prefrontal cortex

  • mucosa of transverse colon

  • Brodmann area 9

  • right frontal lobe

  • lymph node

  • olfactory zone of nasal mucosa
Top expressed in
  • neural layer of retina

  • embryo

  • epithelium of lens

  • retinal pigment epithelium

  • skin of abdomen

  • primary visual cortex

  • pineal gland

  • zygote

  • olfactory bulb

  • trachea
More reference expression data
BioGPS
More reference expression data
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo /QuickGO
Orthologs
SpeciesHumanMouse
Entrez

778

54652

Ensembl

ENSG00000102001

ENSMUSG00000031142

UniProt

O60840

Q9JIS7

RefSeq (mRNA)

NM_001256789
NM_001256790
NM_005183

NM_019582

RefSeq (protein)

NP_001243718
NP_001243719
NP_005174

n/a

Location (UCSC)Chr X: 49.21 – 49.23 MbChr X: 7.47 – 7.5 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Cav1.4 also known as thecalcium channel, voltage-dependent, L type, alpha 1F subunit (CACNA1F), is a humangene.[5]

This gene encodes a member of the alpha-1 subunit family; aprotein in thevoltage-dependent calcium channel complex. Calcium channels mediate the influx of calcium ions into the cell upon membrane polarization and consist of a complex of alpha-1, alpha-2/delta, beta, and gamma subunits in a 1:1:1:1 ratio. The alpha-1 subunit has 24 transmembrane segments and forms the pore through which ions pass into the cell. There are multipleisoforms of each of the proteins in the complex, either encoded by different genes or the result of alternative splicing oftranscripts. Alternate transcriptional splice variants of the gene described here have been observed but have not been thoroughly characterized. Mutations in this gene have been shown to cause incompleteX-linked congenital stationary night blindness type 2 (CSNB2).[5]

See also

[edit]

References

[edit]
  1. ^abcGRCh38: Ensembl release 89: ENSG00000102001Ensembl, May 2017
  2. ^abcGRCm38: Ensembl release 89: ENSMUSG00000031142Ensembl, May 2017
  3. ^"Human PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^"Mouse PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ab"Entrez Gene: CACNA1F calcium channel, voltage-dependent, L type, alpha 1F subunit".

Further reading

[edit]

External links

[edit]

This article incorporates text from theUnited States National Library of Medicine, which is in thepublic domain.

Ligand-gated
Voltage-gated
Constitutively active
Proton-gated
Voltage-gated
Calcium-activated
Inward-rectifier
Tandem pore domain
Voltage-gated
Miscellaneous
Cl:Chloride channel
H+:Proton channel
M+:CNG cation channel
M+:TRP cation channel
H2O (+solutes):Porin
Cytoplasm:Gap junction
By gating mechanism
Ion channel class
see alsodisorders
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