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Caspase 6

From Wikipedia, the free encyclopedia
(Redirected fromCaspase-6)
Enzyme found in humans
CASP6
Available structures
PDBOrtholog search:PDBeRCSB
List of PDB id codes

2WDP,3K7E,3NKF,3NR2,3OD5,3P45,3P4U,3QNW,3S70,3S8E,3V6L,3V6M,4EJF,4FXO,4HVA,4IYR,4N5D,4N6G,4N7J,4N7M,4NBK,4NBL,4NBN

Identifiers
AliasesCASP6, MCH2, Caspase 6, CSP-6
External IDsOMIM:601532;MGI:1312921;HomoloGene:37455;GeneCards:CASP6;OMA:CASP6 - orthologs
Gene location (Human)
Chromosome 4 (human)
Chr.Chromosome 4 (human)[1]
Chromosome 4 (human)
Genomic location for CASP6
Genomic location for CASP6
Band4q25Start109,688,622bp[1]
End109,703,583bp[1]
Gene location (Mouse)
Chromosome 3 (mouse)
Chr.Chromosome 3 (mouse)[2]
Chromosome 3 (mouse)
Genomic location for CASP6
Genomic location for CASP6
Band3|3 G3Start129,695,074bp[2]
End129,707,752bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • rectum

  • mucosa of transverse colon

  • oocyte

  • secondary oocyte

  • jejunal mucosa

  • duodenum

  • pancreatic ductal cell

  • mucosa of sigmoid colon

  • buccal mucosa cell

  • islet of Langerhans
Top expressed in
  • gastric mucosa

  • epithelium of stomach

  • mucous cell of stomach

  • pyloric antrum

  • duodenum

  • jejunum

  • endocardial cushion

  • migratory enteric neural crest cell

  • yolk sac

  • parotid gland
More reference expression data
BioGPS


More reference expression data
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo /QuickGO
Orthologs
SpeciesHumanMouse
Entrez

839

12368

Ensembl

ENSG00000138794

ENSMUSG00000027997

UniProt

P55212

O08738

RefSeq (mRNA)

NM_001226
NM_032992

NM_009811

RefSeq (protein)

NP_001217
NP_116787

NP_033941

Location (UCSC)Chr 4: 109.69 – 109.7 MbChr 3: 129.7 – 129.71 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Caspase-6 is anenzyme that in humans is encoded by theCASP6gene.[5][6]CASP6orthologs[7] have been identified in numerousmammals for which complete genome data are available. Unique orthologs are also present inbirds,lizards,lissamphibians, andteleosts. Caspase-6 has known functions inapoptosis,[8] earlyimmune response[9][10] andneurodegeneration inHuntington's andAlzheimer's disease.[11]

Function

[edit]

This gene encodes a protein that is a member of thecysteine-aspartic acidprotease (caspase) family. Sequential activation of caspases plays a central role in the execution-phase of cellapoptosis.[8] Caspases exist as inactiveproenzymes that undergoproteolytic processing at conserved aspartic residues to produce two subunits, large and small, thatdimerize to form the active enzyme. This protein is processed bycaspases 7,8 and10, and is thought to function as a downstream enzyme in the caspase activation cascade. Caspase 6 can also undergo self-processing without other members of the caspase family.[12]Alternative splicing of this gene results in two transcript variants that encode different isoforms.[13]

Caspase-6 plays a role in the early immune response via de-repression. It reduces the expression of the immunosuppressant cytokineinterleukin-10[9] and cleaves the macrophage suppressingIRAK-M.[10]

With respect toneurodegeneration, caspase-6 cleavesHTT inHuntington's andAPP inAlzheimer's disease. Resulting in both cases inprotein aggregation of the fragments.[11]

Interactions

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Caspase 6 has been shown tointeract withCaspase 8.[14][15][16]

See also

[edit]

References

[edit]
  1. ^abcGRCh38: Ensembl release 89: ENSG00000138794Ensembl, May 2017
  2. ^abcGRCm38: Ensembl release 89: ENSMUSG00000027997Ensembl, May 2017
  3. ^"Human PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^"Mouse PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^Tiso N, Pallavicini A, Muraro T, Zimbello R, Apolloni E, Valle G, Lanfranchi G, Danieli GA (Oct 1996). "Chromosomal localization of the human genes, CPP32, Mch2, Mch3, and Ich-1, involved in cellular apoptosis".Biochem Biophys Res Commun.225 (3):983–9.doi:10.1006/bbrc.1996.1282.hdl:11577/2461073.PMID 8780721.
  6. ^Fernandes-Alnemri T, Litwack G, Alnemri ES (Aug 1995). "Mch2, a new member of the apoptotic Ced-3/Ice cysteine protease gene family".Cancer Res.55 (13):2737–42.PMID 7796396.
  7. ^"OrthoMaM phylogenetic marker: CASP6 coding sequence". Archived fromthe original on 2016-03-03. Retrieved2009-12-20.
  8. ^abCohen, Gerald M. (1997-08-15)."Caspases: the executioners of apoptosis".Biochemical Journal.326 (1):1–16.doi:10.1042/bj3260001.ISSN 0264-6021.PMC 1218630.PMID 9337844.
  9. ^abBartel, Alexander; Göhler, André; Hopf, Verena; Breitbach, Katrin (2017-07-07)."Caspase-6 mediates resistance against Burkholderia pseudomallei infection and influences the expression of detrimental cytokines".PLOS ONE.12 (7): e0180203.Bibcode:2017PLoSO..1280203B.doi:10.1371/journal.pone.0180203.ISSN 1932-6203.PMC 5501493.PMID 28686630.
  10. ^abKobayashi, Hiroshi; Nolan, Anna; Naveed, Bushra; Hoshino, Yoshihiko; Segal, Leopoldo N.; Fujita, Yoko; Rom, William N.; Weiden, Michael D. (2011-01-01)."Neutrophils Activate Alveolar Macrophages by Producing Caspase-6–Mediated Cleavage of IL-1 Receptor-Associated Kinase-M".The Journal of Immunology.186 (1):403–410.doi:10.4049/jimmunol.1001906.ISSN 0022-1767.PMC 3151149.PMID 21098228.
  11. ^abGraham, Rona K.; Ehrnhoefer, Dagmar E.; Hayden, Michael R. (2011-12-01)."Caspase-6 and neurodegeneration".Trends in Neurosciences.34 (12):646–656.doi:10.1016/j.tins.2011.09.001.ISSN 0166-2236.PMID 22018804.S2CID 1603684.
  12. ^Wang XJ, Cao Q, Liu X, Wang KT, Mi W, Zhang Y, Li LF, LeBlanc AC, Su XD (Nov 2010)."Crystal structures of human caspase 6 reveal a new mechanism for intramolecular cleavage self-activation".EMBO Rep.11 (11):841–7.doi:10.1038/embor.2010.141.PMC 2966951.PMID 20890311.
  13. ^"Entrez Gene: CASP6 caspase 6, apoptosis-related cysteine peptidase".
  14. ^Cowling V, Downward J (Oct 2002)."Caspase-6 is the direct activator of caspase-8 in the cytochrome c-induced apoptosis pathway: absolute requirement for removal of caspase-6 prodomain".Cell Death Differ.9 (10):1046–56.doi:10.1038/sj.cdd.4401065.PMID 12232792.
  15. ^Guo Y, Srinivasula SM, Druilhe A, Fernandes-Alnemri T, Alnemri ES (Apr 2002)."Caspase-2 induces apoptosis by releasing proapoptotic proteins from mitochondria".J. Biol. Chem.277 (16):13430–7.doi:10.1074/jbc.M108029200.PMID 11832478.
  16. ^Srinivasula SM, Ahmad M, Fernandes-Alnemri T, Litwack G, Alnemri ES (Dec 1996)."Molecular ordering of the Fas-apoptotic pathway: The Fas/APO-1 protease Mch5 is a CrmA-inhibitable protease that activates multiple Ced-3/ICE-like cysteine proteases".Proc. Natl. Acad. Sci. U.S.A.93 (25):14486–91.Bibcode:1996PNAS...9314486S.doi:10.1073/pnas.93.25.14486.PMC 26159.PMID 8962078.

Further reading

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External links

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Caspase
Fruit-derived
Calpain
Cathepsin
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