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CXCR6

From Wikipedia, the free encyclopedia
Mammalian protein found in Homo sapiens

CXCR6
Identifiers
AliasesCXCR6, BONZO, CD186, STRL33, TYMSTR, C-X-C motif chemokine receptor 6
External IDsOMIM:605163;MGI:1934582;HomoloGene:38197;GeneCards:CXCR6;OMA:CXCR6 - orthologs
Gene location (Human)
Chromosome 3 (human)
Chr.Chromosome 3 (human)[1]
Chromosome 3 (human)
Genomic location for CXCR6
Genomic location for CXCR6
Band3p21.31Start45,940,933bp[1]
End45,948,351bp[1]
Gene location (Mouse)
Chromosome 9 (mouse)
Chr.Chromosome 9 (mouse)[2]
Chromosome 9 (mouse)
Genomic location for CXCR6
Genomic location for CXCR6
Band9 F4|9 74.57 cMStart123,635,540bp[2]
End123,640,825bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • spleen

  • lymph node

  • amniotic fluid

  • gallbladder

  • appendix

  • blood

  • tonsil

  • mucosa of transverse colon

  • granulocyte

  • epithelium of colon
Top expressed in
  • thymus

  • embryo

  • embryo

  • mesenteric lymph nodes

  • spleen

  • blastocyst

  • blood

  • subcutaneous adipose tissue

  • right kidney

  • duodenum
More reference expression data
BioGPS


More reference expression data
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo /QuickGO
Orthologs
SpeciesHumanMouse
Entrez

10663

80901

Ensembl

ENSG00000172215

ENSMUSG00000048521

UniProt

O00574

Q9EQ16

RefSeq (mRNA)

NM_006564

NM_030712

RefSeq (protein)

NP_006555

NP_109637

Location (UCSC)Chr 3: 45.94 – 45.95 MbChr 9: 123.64 – 123.64 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

C-X-C chemokine receptor type 6 is aprotein that in humans is encoded by theCXCR6gene.[5][6][7] CXCR6 has also recently been designatedCD186 (cluster of differentiation 186).

CXCR6 has been identified as an entry coreceptor used by HIV-1 and SIV to enter target cells, in conjunction with CD4.[5][6][7][8] It is a minor coreceptor for HIV-1, nearly all strains of which use CCR5 and/or CXCR4. Most SIV strains can use CXCR6 and recent evidence suggests that in monkeys that serve as the natural hosts of SIV, CXCR6 may be a major coreceptor.[8] CXCR6 was previously known as "Bonzo" and "STRL33" in the HIV/SIV field.

References

[edit]
  1. ^abcGRCh38: Ensembl release 89: ENSG00000172215Ensembl, May 2017
  2. ^abcGRCm38: Ensembl release 89: ENSMUSG00000048521Ensembl, May 2017
  3. ^"Human PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^"Mouse PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^abLiao F, Alkhatib G, Peden KW, Sharma G, Berger EA, Farber JM (June 1997)."STRL33, A novel chemokine receptor-like protein, functions as a fusion cofactor for both macrophage-tropic and T cell line-tropic HIV-1".The Journal of Experimental Medicine.185 (11):2015–23.doi:10.1084/jem.185.11.2015.PMC 2196334.PMID 9166430.
  6. ^abDeng HK, Unutmaz D, KewalRamani VN, Littman DR (July 1997)."Expression cloning of new receptors used by simian and human immunodeficiency viruses".Nature.388 (6639):296–300.Bibcode:1997Natur.388..296D.doi:10.1038/40894.PMID 9230441.S2CID 4369660.
  7. ^ab"Entrez Gene: CXCR6 chemokine (C-X-C motif) receptor 6".
  8. ^abElliott ST, Wetzel KS, Francella N, Bryan S, Romero DC, Riddick NE, Shaheen F, Vanderford T, Derdeyn CA, Silvestri G, Paiardini M, Collman RG (September 2015)."Dualtropic CXCR6/CCR5 Simian Immunodeficiency Virus (SIV) Infection of Sooty Mangabey Primary Lymphocytes: Distinct Coreceptor Use in Natural versus Pathogenic Hosts of SIV".Journal of Virology.89 (18):9252–61.doi:10.1128/JVI.01236-15.PMC 4542357.PMID 26109719.

Further reading

[edit]

External links

[edit]

This article incorporates text from theUnited States National Library of Medicine, which is in thepublic domain.


Chemokine receptor
(GPCRs)
CC
CXC
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TNF receptor
1-10
11-20
21-27
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Type I
γ-chain
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gp130
IL12RB1
Other
Type II
Ig superfamily
IL 17 family
Enzyme-linked receptor
1–50
51–100
101–150
151–200
201–250
251–300
301–350
CC
CCR1
CCR2
CCR3
CCR4
CCR5
CCR6
CCR7
CCR8
CCR9
CCR10
CCR11
Ungrouped
CXC
CXCR1
(IL-8Rα)
CXCR2
(IL-8Rβ)
CXCR3
CXCR4
CXCR5
CXCR6
CXCR7
C (XC)
XCR1
CX3C
CX3CR1
Others
CCBP2
CMKLR1


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