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COVID-19 datasets

From Wikipedia, the free encyclopedia
Datasets on COVID-19

COVID-19 datasets are public databases for sharing case data and medical information related to theCOVID-19 pandemic.

Aggregate statistics

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United States

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Volunteer/non-government

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PublisherDate of first publicationIn official use?Update

Frequency

Geographic

Level

TimeseriesTesting

Sites

Testing

Number

CasesHospitalizationsDeathsVaccination

Sites

Vaccination

Number

Description
Coders Against COVID/GISCorps[1]March 22, 2020[2]Yes, by FEMA[3] and State of California[4]DailyPoint (lat/long)YesYesNoNoNoNoYesNoA dataset of COVID-19 testing locations in the United States and Puerto Rico
USAFacts[5]April 24, 2020[6]Yes, by CDC[7]DailyCountyYesNoNoYesYesNoNoA dataset of county-level coronavirus cases and deaths that is updated daily
COVID Tracking Project[8]March 7, 2020[9]NoDailyStateYesNoYesYesYesYesNoNoA volunteer-run database of testing and medical stats in the United States
Sentiment Analysis of users reviews on COVID-19 contact tracing mobile applications[10][11]March 2021This dataset is intended to support sentiment analysis of users' reviews on COVID-19 contact tracing mobile applications.

U.S. Department of Health & Human Services

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NameGeographic

Level

TimeseriesTesting

Sites

Testing

Number

CasesHospitalizationsDeathsVaccination

Sites

Vaccination

Number

COVID-19 Diagnostic Laboratory Testing (PCR Testing) Time SeriesArchived 2021-03-12 at theWayback MachineStateYesNoYesNoNoNoNoNo
COVID-19 Reported Patient Impact and Hospital Capacity by FacilityArchived 2021-03-12 at theWayback MachinePoint (lat/long)YesNoNoNoYesNoNoNo
COVID-19 Estimated Patient Impact and Hospital Capacity by StateArchived 2021-03-12 at theWayback MachineStateNoNoNoNoYesNoNoNo
COVID-19 Reported Patient Impact and Hospital Capacity by StateArchived 2021-03-08 at theWayback MachineStateNoNoNoNoYesNoNoNo
COVID-19 Reported Patient Impact and Hospital Capacity by State TimeseriesArchived 2021-03-10 at theWayback MachineStateYesNoNoNoYesNoNoNo

Global

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  • Johns Hopkins Coronavirus Resource Center: Global aggregated data including cases, testing, contact tracing, and vaccine development[12]
  • World Health Organization (WHO) Coronavirus Disease Dashboard: a database of confirmed cases and deaths reported globally and broken down by region.[13] This database is part of the WHO Health Data Platform.[14]
  • COVID-19 Africa Open Data Project: a volunteer-run database and dashboard reporting region, country and district level case counts, deaths, healthcare worker infections, healthcare services and urgent needs.[15]

Data hubs

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Topic-specific and special-interest resources

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Genomics

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Imaging (Radiology)

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References

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  1. ^Torpey, Holly; Caballero, M.D., Jorge A. (eds.)."COVID-19 Testing Sites Data".GISCorps/Coders Against COVID Testing Site Data. Retrieved2020-12-14.
  2. ^"Volunteer group develops a COVID-19 testing location database for the U.S."TechCrunch. Retrieved2021-02-03.
  3. ^"App of the Week: COVID-19 Testing Sites Locator".Federal Emergency Management Agency (FEMA). Retrieved2021-02-03.
  4. ^"COVID-19 Testing Sites in California".www.arcgis.com. Retrieved2021-02-03.
  5. ^"US Coronavirus Cases and Deaths".USAFacts.org. 2021-02-03. Retrieved2021-02-03.
  6. ^"Detailed Methodology and Sources: COVID-19 Data".USAFacts. Retrieved2021-02-03.
  7. ^"Coronavirus Outbreak Stats & Data".USAFacts. Retrieved2021-02-03.
  8. ^Stephens, Autumn (21 August 2020)."Tracking Star in Oakland".Diablo Magazine. Retrieved2020-09-18.
  9. ^"About Us".The COVID Tracking Project. Retrieved2021-02-03.
  10. ^Ahmad, Kashif (2021)."A Benchmark Dataset for Sentiment Analysis of Users' Reviews on COVID-19 Contact Tracing Applications". Harvard Dataverse.doi:10.7910/DVN/1RDRCM.{{cite journal}}:Cite journal requires|journal= (help)
  11. ^Ahmad, Kashif (2021). "Sentiment Analysis of Users' Reviews on COVID-19 Contact Tracing Apps with a Benchmark Dataset".arXiv:2103.01196 [cs.CL].
  12. ^"Home".Johns Hopkins Coronavirus Resource Center. Retrieved2020-09-18.
  13. ^"WHO Coronavirus Disease (COVID-19) Dashboard".covid19.who.int. Retrieved2020-09-18.
  14. ^"World Health Data Platform - WHO".www.who.int. Retrieved2020-09-18.
  15. ^"COVID-19 Africa Open Data". Retrieved16 November 2020.
  16. ^"Open-Access Data and Computational Resources to Address COVID-19 | Data Science at NIH".datascience.nih.gov. Retrieved2020-10-13.
  17. ^"CORD-19".Semantic Scholar. Retrieved2020-10-13.
  18. ^"Analysis of COVID-19 publications identifies research gaps".EurekAlert!. Retrieved2020-10-13.
  19. ^"Call to Action to the Tech Community on New Machine Readable COVID-19 Dataset".whitehouse.gov. Retrieved2020-10-13 – viaNational Archives.
  20. ^"NLM Leverages Data, Text Mining to Sharpen COVID-19 Research Databases".governmentciomedia.com. 11 May 2020. Retrieved2020-10-13.
  21. ^"GISAID".www.gisaid.org. Retrieved29 December 2020.
  22. ^"Nexstrain SARS-CoV-2 Dashboard".nextstrain.org. Retrieved29 December 2020.
  23. ^"Nextstrain".docs.nextstrain.org. Retrieved29 December 2020.
  24. ^Li Y, Xia L (March 2020)."Coronavirus Disease 2019 (COVID-19): Role of Chest CT in Diagnosis and Management".American Journal of Roentgenology.214 (6):1280–1286.doi:10.2214/AJR.20.22954.PMID 32130038.S2CID 212416282.
  25. ^"COVID-19 related projects".Mila. COVID-19 image data collection. Retrieved12 July 2020.
  26. ^"COVID-19 image data collection".GitHub. Retrieved12 July 2020.
  27. ^Cohen, Joseph (25 March 2020). "COVID-19 image data collection".arXiv:2003.11597 [eess.IV].
  28. ^"BIMCV-COVID19, Datasets related to COVID19's pathology course".Medical Imaging Databank in Valencian Region Medical. Retrieved12 July 2020.
  29. ^de la Iglesia Vayá, Maria (1 June 2020). "BIMCV COVID-19+: a large annotated dataset of RX and CT images from COVID-19 patients".arXiv:2006.01174 [eess.IV].
  30. ^"COVID-19 Database".Società Italiana di Radiologia Medica e Interventistica (in Italian). Retrieved2020-03-11.
  31. ^"Pneumothorax and pneumomediastinum: a rare complication in the evolution of COVID-19 pneumonia".Eurorad. Retrieved12 July 2020.
  32. ^Bell, Daniel; Knipe, Henry."COVID-19 (summary)".Radiopaedia. Retrieved12 July 2020.
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