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Collagen, type XXVIII, alpha 1

From Wikipedia, the free encyclopedia
(Redirected fromCOL28A1)
Protein found in humans
COL28A1
Identifiers
AliasesCOL28A1, COL28, collagen type XXVIII alpha 1, collagen type XXVIII alpha 1 chain
External IDsOMIM:609996;MGI:2685312;HomoloGene:66345;GeneCards:COL28A1;OMA:COL28A1 - orthologs
Gene location (Human)
Chromosome 7 (human)
Chr.Chromosome 7 (human)[1]
Chromosome 7 (human)
Genomic location for COL28A1
Genomic location for COL28A1
Band7p21.3Start7,356,203bp[1]
End7,535,873bp[1]
Gene location (Mouse)
Chromosome 6 (mouse)
Chr.Chromosome 6 (mouse)[2]
Chromosome 6 (mouse)
Genomic location for COL28A1
Genomic location for COL28A1
Band6|6 A1Start7,997,808bp[2]
End8,192,617bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • sural nerve

  • trigeminal ganglion

  • spinal ganglia

  • right uterine tube

  • bronchial epithelial cell

  • olfactory zone of nasal mucosa

  • epithelium of colon

  • parotid gland

  • muscle layer of sigmoid colon

  • anterior pituitary
Top expressed in
  • spermatocyte

  • spermatid

  • morula

  • zygote

  • esophagus

  • primary oocyte

  • quadriceps femoris muscle

  • lip

  • secondary oocyte

  • urinary bladder
More reference expression data
BioGPS
n/a
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo /QuickGO
Orthologs
SpeciesHumanMouse
Entrez

340267

213945

Ensembl

ENSG00000215018

ENSMUSG00000068794

UniProt

Q2UY09

Q2UY11

RefSeq (mRNA)

NM_001037763

NM_001037865

RefSeq (protein)

NP_001032852

NP_001032954

Location (UCSC)Chr 7: 7.36 – 7.54 MbChr 6: 8 – 8.19 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Collagen, type XXVIII, alpha 1 also known asCOL28A1 is aprotein that in humans is encoded by theCOL28A1gene.[5] This protein belongs to a class of collagens that containvon Willebrand factor type A domains.[6] The protein is encoded by theCOL28A1gene which contains 45exons and is found of the p arm of chromosome 7.[6]

References

[edit]
  1. ^abcGRCh38: Ensembl release 89: ENSG00000215018Ensembl, May 2017
  2. ^abcGRCm38: Ensembl release 89: ENSMUSG00000068794Ensembl, May 2017
  3. ^"Human PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^"Mouse PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^Veit G, Kobbe B, Keene DR, Paulsson M, Koch M, Wagener R (Feb 2006)."Collagen XXVIII, a novel von Willebrand factor A domain-containing protein with many imperfections in the collagenous domain".The Journal of Biological Chemistry.281 (6):3494–504.doi:10.1074/jbc.M509333200.PMID 16330543.
  6. ^ab"COL28A1 collagen, type XXVIII, alpha 1 [Homo sapiens (human)] - Gene - NCBI".www.ncbi.nlm.nih.gov. Retrieved2015-09-25.
Extracellular
matrix
Collagen
Fibril forming
Other
Enzymes
Laminin
Other
Other


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