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CELSR2

From Wikipedia, the free encyclopedia
Protein-coding gene in the species Homo sapiens
CELSR2
Identifiers
AliasesCELSR2, CDHF10, EGFL2, Flamingo1, MEGF3, ADGRC2, cadherin EGF LAG seven-pass G-type receptor 2
External IDsOMIM:604265;MGI:1858235;HomoloGene:1078;GeneCards:CELSR2;OMA:CELSR2 - orthologs
Gene location (Human)
Chromosome 1 (human)
Chr.Chromosome 1 (human)[1]
Chromosome 1 (human)
Genomic location for CELSR2
Genomic location for CELSR2
Band1p13.3Start109,249,539bp[1]
End109,275,751bp[1]
Gene location (Mouse)
Chromosome 3 (mouse)
Chr.Chromosome 3 (mouse)[2]
Chromosome 3 (mouse)
Genomic location for CELSR2
Genomic location for CELSR2
Band3 F3|3 47.02 cMStart108,298,167bp[2]
End108,323,383bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • ganglionic eminence

  • ventricular zone

  • right frontal lobe

  • prefrontal cortex

  • primary visual cortex

  • hippocampus proper

  • postcentral gyrus

  • C1 segment

  • Brodmann area 9

  • superior frontal gyrus
Top expressed in
  • superior surface of tongue

  • gallbladder

  • lip

  • subiculum

  • superior frontal gyrus

  • visual cortex

  • motor neuron

  • ascending aorta

  • primary visual cortex

  • extensor digitorum longus muscle
More reference expression data
BioGPS


More reference expression data
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo /QuickGO
Orthologs
SpeciesHumanMouse
Entrez

1952

53883

Ensembl

ENSG00000143126

ENSMUSG00000068740

UniProt

Q9HCU4

Q9R0M0

RefSeq (mRNA)

NM_001408

NM_001004177
NM_017392

RefSeq (protein)

NP_001399

NP_001004177
NP_059088

Location (UCSC)Chr 1: 109.25 – 109.28 MbChr 3: 108.3 – 108.32 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Cadherin EGF LAG seven-pass G-type receptor 2 is aprotein that in humans is encoded by theCELSR2gene.[5][6]

The protein encoded by this gene is a member of theflamingo subfamily, part of thecadherin superfamily. The flamingo subfamily consists of nonclassic-typecadherins; a subpopulation that does not interact withcatenins. The flamingo cadherins are located at the plasma membrane and have nine cadherin domains, seven epidermal growth factor-like repeats and two laminin A G-type repeats in their ectodomain. They also have seven transmembrane domains, a characteristic unique to this subfamily. It is postulated that these proteins are receptors involved in contact-mediated communication, with cadherin domains acting ashomophilic binding regions and the EGF-like domains involved incell adhesion and receptor-ligand interactions. The specific function of this particular member has not been determined.[6]

See also

[edit]

References

[edit]
  1. ^abcGRCh38: Ensembl release 89: ENSG00000143126Ensembl, May 2017
  2. ^abcGRCm38: Ensembl release 89: ENSMUSG00000068740Ensembl, May 2017
  3. ^"Human PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^"Mouse PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^Nakayama M, Nakajima D, Nagase T, Nomura N, Seki N, Ohara O (Sep 1998). "Identification of high-molecular-weight proteins with multiple EGF-like motifs by motif-trap screening".Genomics.51 (1):27–34.doi:10.1006/geno.1998.5341.PMID 9693030.
  6. ^ab"Entrez Gene: CELSR2 cadherin, EGF LAG seven-pass G-type receptor 2 (flamingo homolog, Drosophila)".

Further reading

[edit]

External links

[edit]

This article incorporates text from theUnited States National Library of Medicine, which is in thepublic domain.

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