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CEBPE

From Wikipedia, the free encyclopedia
Protein-coding gene in humans
CEBPE
Available structures
PDBOrtholog search:PDBeRCSB
List of PDB id codes

3T92

Identifiers
AliasesCEBPE, C/EBP-epsilon, CRP1, CCAAT/enhancer binding protein epsilon, CCAAT enhancer binding protein epsilon, c/EBP epsilon
External IDsOMIM:600749;MGI:103572;HomoloGene:1367;GeneCards:CEBPE;OMA:CEBPE - orthologs
Gene location (Human)
Chromosome 14 (human)
Chr.Chromosome 14 (human)[1]
Chromosome 14 (human)
Genomic location for CEBPE
Genomic location for CEBPE
Band14q11.2Start23,117,036bp[1]
End23,120,256bp[1]
Gene location (Mouse)
Chromosome 14 (mouse)
Chr.Chromosome 14 (mouse)[2]
Chromosome 14 (mouse)
Genomic location for CEBPE
Genomic location for CEBPE
Band14 C2|14 27.9 cMStart54,947,817bp[2]
End54,949,631bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • bone marrow

  • trabecular bone

  • bone marrow cell

  • gonad

  • blood

  • monocyte

  • granulocyte

  • vena cava

  • spleen

  • duodenum
Top expressed in
  • granulocyte

  • bone marrow

  • embryo

  • liver

  • jejunum

  • ileum

  • spleen

  • lip

  • quadriceps femoris muscle

  • colon
More reference expression data
BioGPS
More reference expression data
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo /QuickGO
Orthologs
SpeciesHumanMouse
Entrez

1053

110794

Ensembl

ENSG00000092067

ENSMUSG00000052435

UniProt

Q15744

Q6PZD9

RefSeq (mRNA)

NM_001805

NM_207131

RefSeq (protein)

NP_001796

NP_997014

Location (UCSC)Chr 14: 23.12 – 23.12 MbChr 14: 54.95 – 54.95 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

CCAAT/enhancer binding protein (C/EBP), epsilon, also known asCEBPE andCRP1, is a type ofccaat-enhancer-binding protein.CEBPE is its humangene[5][6] and is pro-apoptotic.[7]

The protein encoded by this gene is abZIPtranscription factor which can bind as a homodimer to certain DNA regulatory regions. It can also form heterodimers with the related proteinCEBP-δ. The encoded protein may be essential for terminal differentiation and functional maturation of committedgranulocyteprogenitor cells. Mutations in this gene have been associated withspecific granule deficiency, a rare congenital disorder. Multiple variants of this gene have been described, but the full-length nature of only one has been determined.[5]

References

[edit]
  1. ^abcGRCh38: Ensembl release 89: ENSG00000092067Ensembl, May 2017
  2. ^abcGRCm38: Ensembl release 89: ENSMUSG00000052435Ensembl, May 2017
  3. ^"Human PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^"Mouse PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ab"Entrez Gene: CEBPE CCAAT/enhancer binding protein (C/EBP), epsilon".
  6. ^Antonson P, Stellan B, Yamanaka R, Xanthopoulos KG (Jul 1996). "A novel human CCAAT/enhancer binding protein gene, C/EBPepsilon, is expressed in cells of lymphoid and myeloid lineages and is localized on chromosome 14q11.2 close to the T-cell receptor alpha/delta locus".Genomics.35 (1):30–8.doi:10.1006/geno.1996.0319.PMID 8661101.
  7. ^Nakajima H, Watanabe N, Shibata F, Kitamura T, Ikeda Y, Handa M (May 2006)."N-terminal region of CCAAT/enhancer-binding protein epsilon is critical for cell cycle arrest, apoptosis, and functional maturation during myeloid differentiation".The Journal of Biological Chemistry.281 (20):14494–502.doi:10.1074/jbc.M600575200.PMID 16531405.

Further reading

[edit]

External links

[edit]

This article incorporates text from theUnited States National Library of Medicine, which is in thepublic domain.

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(1) Basic domains
(1.1) Basicleucine zipper (bZIP)
(1.2) Basic helix-loop-helix (bHLH)
Group A
Group B
Group C
bHLH-PAS
Group D
Group E
Group F
bHLH-COE
(1.3)bHLH-ZIP
(1.4) NF-1
(1.5) RF-X
(1.6) Basic helix-span-helix (bHSH)
(2)Zinc finger DNA-binding domains
(2.1)Nuclear receptor(Cys4)
subfamily 1
subfamily 2
subfamily 3
subfamily 4
subfamily 5
subfamily 6
subfamily 0
(2.2) Other Cys4
(2.3) Cys2His2
(2.4) Cys6
(2.5) Alternating composition
(2.6) WRKY
(3.1)Homeodomain
Antennapedia
ANTP class
protoHOX
Hox-like
metaHOX
NK-like
other
(3.2) Paired box
(3.3)Fork head /winged helix
(3.4)Heat shock factors
(3.5) Tryptophan clusters
(3.6) TEA domain
  • transcriptional enhancer factor
(4)β-Scaffold factors with minor groove contacts
(4.1)Rel homology region
(4.2)STAT
(4.3) p53-like
(4.4)MADS box
(4.6)TATA-binding proteins
(4.7)High-mobility group
(4.9) Grainyhead
(4.10) Cold-shock domain
(4.11) Runt
(0) Other transcription factors
(0.2) HMGI(Y)
(0.3)Pocket domain
(0.5)AP-2/EREBP-related factors
(0.6) Miscellaneous
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