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CD48

From Wikipedia, the free encyclopedia
Protein-coding gene in humans
CD48
Available structures
PDBOrtholog search:PDBeRCSB
List of PDB id codes

2EDO

Identifiers
AliasesCD48, BCM1, BLAST, BLAST1, MEM-102, SLAMF2, hmCD48 molecule
External IDsOMIM:109530;MGI:88339;HomoloGene:1347;GeneCards:CD48;OMA:CD48 - orthologs
Gene location (Human)
Chromosome 1 (human)
Chr.Chromosome 1 (human)[1]
Chromosome 1 (human)
Genomic location for CD48
Genomic location for CD48
Band1q23.3Start160,678,746bp[1]
End160,711,831bp[1]
Gene location (Mouse)
Chromosome 1 (mouse)
Chr.Chromosome 1 (mouse)[2]
Chromosome 1 (mouse)
Genomic location for CD48
Genomic location for CD48
Band1 H3|1 79.54 cMStart171,509,577bp[2]
End171,532,826bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • white blood cell

  • mononuclear cell

  • monocyte

  • granulocyte

  • blood

  • bone marrow cell

  • appendix

  • spleen

  • lymph node

  • epithelium of colon
Top expressed in
  • mesenteric lymph nodes

  • spleen

  • stroma of bone marrow

  • blood

  • thymus

  • calvaria

  • granulocyte

  • subcutaneous adipose tissue

  • white adipose tissue

  • pharynx
More reference expression data
BioGPS
More reference expression data
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo /QuickGO
Orthologs
SpeciesHumanMouse
Entrez

962

12506

Ensembl

ENSG00000117091

ENSMUSG00000015355

UniProt

P09326

P18181

RefSeq (mRNA)

NM_001256030
NM_001778

NM_007649
NM_001360767

RefSeq (protein)

NP_001242959
NP_001769

NP_031675
NP_001347696

Location (UCSC)Chr 1: 160.68 – 160.71 MbChr 1: 171.51 – 171.53 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

CD48 antigen (cluster of differentiation 48) also known asB-lymphocyte activation marker (BLAST-1) orsignaling lymphocytic activation molecule 2 (SLAMF2) is aprotein that in humans is encoded by the CD48gene.[5]

CD48 is a member of theCD2 subfamily of theimmunoglobulin superfamily (IgSF) which includesSLAM (signaling lymphocyte activation molecules) proteins, such asCD84,CD150,CD229 andCD244. CD48 is found on the surface oflymphocytes and other immune cells,dendritic cells andendothelial cells, and participates in activation and differentiation pathways in these cells.[5]

CD48 was the first B-cell-specificcellular differentiationantigen identified in transformed Blymphoblasts.[6][7]

Structure

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The gene for CD48 is located inchromosome 1q23 and contains 4 exons, each exon encoding one of the 4 domains of CD48:signal peptide, variable (V) domain, constant 2 (C2) domain and theglycophosphatidylinositol anchor (GPI anchor). The cDNA sequence of 1137 nucleotides encodes a 243 amino acid polypeptide of about 45 kDa.[8][9] It consists of a 26 amino acidsignal peptide, 194 amino acids of mature CD48 (V and C2 domains) and the C-terminal 23 amino acid segment comprising theGPI anchor.[10][11] The GPI linkage of CD48 to the cell surface is through serine residue 220.[10][11] CD48 does not have atransmembrane domain, however, but is held at the cell surface by aGPI anchor via aC-terminal domain which can be cleaved to yield a soluble form of the receptor.[5] The CD48 protein is heavilyglycosylated, with five possible asparagine-linkedglycosylation sites at positions 40, 44, 104, 162 and 189, respectively.[6][7][8][12][13] Approximately 35-40% of the total molecular weight is attributed to the carbohydrate side chains.[12][13][14]

Interactions

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CD48 was found to have a very low affinity forCD2 withdissociation constant (KD{\displaystyle K_{D}}) < 0.5 mM.[15] It was found that the preferred ligand of CD48 is2B4 (CD244), which is also a member of the CD2 subfamilySLAM ofIgSF expressed onnatural killer cells (NK cells) and other leukocytes. The affinity ofCD244 for CD48 is atKD{\displaystyle K_{D}} = 8 μM which is about 5 - 10 times stronger than for CD2.[16][17][18]

Function

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Cell distribution

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CD48 is expressed on allperipheral blood lymphocytes (PBL) includingT cells,B cells, NK cells andthymocytes.[7][8][14][19] It is also found on the surface of activated T cells, mast cells,monocytes andgranulocytes.[12] Like all otherGPI anchor protein (GPI-AP), CD48 is deficient inerythrocytes (red blood cells).

T-cell activation

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CD48 and CD2 molecular coupling together with other interaction pairs of CD28 and CD80, TCR and peptide-MHC and LFA-1 and ICAM-1 contribute to the formation of an immunological synapse between a T cell and anantigen-presenting cell.[20] CD48 interaction with CD2 has been shown to promote lipid raft formation, T cell activation and the formation of caveolae formacrophages through cell signal transduction via GPI moieties.[21][22]

Clinical significance

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CD48 is being investigated amongst other markers in research on inflammation markers and therapies for HIV/AIDS.

Heterozygousgermline mutation in a patient was associated with a recurrent inflammatory syndrome resembling hemophagocytic lymphohistiocytosis.[23]

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See also

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References

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  1. ^abcGRCh38: Ensembl release 89: ENSG00000117091Ensembl, May 2017
  2. ^abcGRCm38: Ensembl release 89: ENSMUSG00000015355Ensembl, May 2017
  3. ^"Human PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^"Mouse PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^abc"Entrez Gene: CD48 CD48 molecule".
  6. ^abThorley-Lawson DA, Schooley RT, Bhan AK, Nadler LM (September 1982). "Epstein-Barr virus superinduces a new human B cell differentiation antigen (B-LAST 1) expressed on transformed lymphoblasts".Cell.30 (2):415–25.doi:10.1016/0092-8674(82)90239-2.PMID 6291768.S2CID 45406805.
  7. ^abcYokoyama S, Staunton D, Fisher R, Amiot M, Fortin JJ, Thorley-Lawson DA (April 1991). "Expression of the Blast-1 activation/adhesion molecule and its identification as CD48".J. Immunol.146 (7):2192–200.doi:10.4049/jimmunol.146.7.2192.PMID 1848579.S2CID 13131389.
  8. ^abcVaughan HA, Henning MM, Purcell DF, McKenzie IF, Sandrin MS (1991). "The isolation of cDNA clones for CD48".Immunogenetics.33 (2):113–7.doi:10.1007/BF00210824.PMID 1999351.S2CID 32479661.
  9. ^Del Porto P, Mami-Chouaib F, Bruneau JM, Jitsukawa S, Dumas J, Harnois M, Hercend T (June 1991)."TCT.1, a target molecule for gamma/delta T cells, is encoded by an immunoglobulin superfamily gene (Blast-1) located in the CD1 region of human chromosome 1".J. Exp. Med.173 (6):1339–44.doi:10.1084/jem.173.6.1339.PMC 2190850.PMID 1827826.
  10. ^abKilleen N, Moessner R, Arvieux J, Willis A, Williams AF (October 1988)."The MRC OX-45 antigen of rat leukocytes and endothelium is in a subset of the immunoglobulin superfamily with CD2, LFA-3 and carcinoembryonic antigens".EMBO J.7 (10):3087–91.doi:10.1002/j.1460-2075.1988.tb03174.x.PMC 454697.PMID 3181129.
  11. ^abStaunton DE, Fisher RC, LeBeau MM, Lawrence JB, Barton DE, Francke U, Dustin M, Thorley-Lawson DA (March 1989)."Blast-1 possesses a glycosyl-phosphatidylinositol (GPI) membrane anchor, is related to LFA-3 and OX-45, and maps to chromosome 1q21-23".J. Exp. Med.169 (3):1087–99.doi:10.1084/jem.169.3.1087.PMC 2189294.PMID 2466936.
  12. ^abcStaunton DE, Thorley-Lawson DA (December 1987)."Molecular cloning of the lymphocyte activation marker Blast-1".EMBO J.6 (12):3695–701.doi:10.1002/j.1460-2075.1987.tb02703.x.PMC 553839.PMID 2828034.
  13. ^abRudd PM, Wormald MR, Stanfield RL, Huang M, Mattsson N, Speir JA, DiGennaro JA, Fetrow JS, Dwek RA, Wilson IA (October 1999). "Roles for glycosylation of cell surface receptors involved in cellular immune recognition".J. Mol. Biol.293 (2):351–66.doi:10.1006/jmbi.1999.3104.PMID 10529350.
  14. ^abVaughan HA, Thompson CH, Sparrow RL, McKenzie IF (October 1983)."Hu Ly-M3--a human leukocyte antigen".Transplantation.36 (4):446–50.doi:10.1097/00007890-198310000-00018.PMID 6623618.S2CID 40061476.
  15. ^Sandrin MS, Mouhtouris E, Vaughan HA, Warren HS, Parish CR (November 1993)."CD48 is a low affinity ligand for human CD2".J. Immunol.151 (9):4606–13.doi:10.4049/jimmunol.151.9.4606.PMID 7691954.S2CID 37921171.
  16. ^Brown MH, Boles K, van der Merwe PA, Kumar V, Mathew PA, Barclay AN (December 1998)."2B4, the natural killer and T cell immunoglobulin superfamily surface protein, is a ligand for CD48".J. Exp. Med.188 (11):2083–90.doi:10.1084/jem.188.11.2083.PMC 2212392.PMID 9841922.
  17. ^Kubin MZ, Parshley DL, Din W, Waugh JY, Davis-Smith T, Smith CA, Macduff BM, Armitage RJ, Chin W, Cassiano L, Borges L, Petersen M, Trinchieri G, Goodwin RG (November 1999)."Molecular cloning and biological characterization of NK cell activation-inducing ligand, a counterstructure for CD48".Eur. J. Immunol.29 (11):3466–77.doi:10.1002/(SICI)1521-4141(199911)29:11<3466::AID-IMMU3466>3.0.CO;2-9.PMID 10556801.
  18. ^Nakajima H, Colonna M (January 2000). "2B4: an NK cell activating receptor with unique specificity and signal transduction mechanism".Hum. Immunol.61 (1):39–43.doi:10.1016/s0198-8859(99)00170-6.PMID 10658976.
  19. ^Henniker AJ, Bradstock KF, Grimsley P, Atkinson MK (1990). "A novel non-lineage antigen on human leucocytes: characterization with two CD-48 monoclonal antibodies".Dis. Markers.8 (4):179–90.PMID 2088634.
  20. ^Malissen B (1999). "Dancing the immunological two-step".Science.285 (5425):207–208.doi:10.1126/science.285.5425.207.PMID 10428718.S2CID 5731764.
  21. ^Mulvey MA, Hultgren SJ (2000). "Cell biology. Bacterial spelunkers".Science.289 (5480):732–733.doi:10.1126/science.289.5480.732.PMID 10950716.S2CID 43466889.
  22. ^Loertscher R, Lavery P (2002). "The role of glycosyl phosphatidyl inositol (GPI)-anchored cell surface proteins in T-cell activation".Transplant Immunology.9 (2–4):93–96.doi:10.1016/s0966-3274(02)00013-8.PMID 12180852.
  23. ^Volkmer B, Planas R, Gossweiler E, Opitz L, Mauracher A, Nüesch U, Gayden T, Kaiser D, Drexel B, Dumrese C, Jabado N, Vavassori S, Pachlopnik Schmid J: Recurrent inflammatory disease caused by a heterozygous mutation in CD48.J Allergy Clin Immunol. 2019;144(5):1441-1445.e17. doi:10.1016/j.jaci.doi:10.1016/j.jaci.2019.07.038

Further reading

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External links

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This article incorporates text from theUnited States National Library of Medicine, which is in thepublic domain.

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